SLC7A11
gene geneOn this page
Also known as xCT
Summary
SLC7A11 (solute carrier family 7 member 11, HGNC:11059) is a protein-coding gene on chromosome 4q28.3, encoding Cystine/glutamate transporter (Q9UPY5). Heterodimer with SLC3A2, that functions as an antiporter by mediating the exchange of extracellular anionic L-cystine and intracellular L-glutamate across the cellular plasma membrane.
This gene encodes a member of a heteromeric, sodium-independent, anionic amino acid transport system that is highly specific for cysteine and glutamate. In this system, designated Xc(-), the anionic form of cysteine is transported in exchange for glutamate. This protein has been identified as the predominant mediator of Kaposi sarcoma-associated herpesvirus fusion and entry permissiveness into cells. Also, increased expression of this gene in primary gliomas (compared to normal brain tissue) was associated with increased glutamate secretion via the XCT channels, resulting in neuronal cell death.
Source: NCBI Gene 23657 — RefSeq curated summary.
At a glance
- GWAS associations: 5
- Clinical variants (ClinVar): 78 total
- Druggable target: yes — 3 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_014331
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:11059 |
| Approved symbol | SLC7A11 |
| Name | solute carrier family 7 member 11 |
| Location | 4q28.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | xCT |
| Ensembl gene | ENSG00000151012 |
| Ensembl biotype | protein_coding |
| OMIM | 607933 |
| Entrez | 23657 |
Gene structure
Transcript identifiers
Ensembl transcripts: 2 — 1 protein_coding, 1 nonsense_mediated_decay
ENST00000280612, ENST00000509248
RefSeq mRNA: 1 — MANE Select: NM_014331
NM_014331
CCDS: CCDS3742
Canonical transcript exons
ENST00000280612 — 12 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000997220 | 138236325 | 138236451 |
| ENSE00001171350 | 138182297 | 138182393 |
| ENSE00001171368 | 138185121 | 138185244 |
| ENSE00001171375 | 138214585 | 138214629 |
| ENSE00001171386 | 138219266 | 138219365 |
| ENSE00001171399 | 138223199 | 138223324 |
| ENSE00001171409 | 138232267 | 138232382 |
| ENSE00001251686 | 138241793 | 138242349 |
| ENSE00001313399 | 138164097 | 138172017 |
| ENSE00003490524 | 138180641 | 138180790 |
| ENSE00003565876 | 138183202 | 138183305 |
| ENSE00003632183 | 138179217 | 138179394 |
Expression profiles
Bgee: expression breadth ubiquitous, 251 present calls, max score 94.78.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 51.8368 / max 2392.8602, expressed in 1661 samples.
FANTOM5 promoters (14 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 54007 | 41.2428 | 1600 |
| 54008 | 3.0005 | 973 |
| 54009 | 2.9923 | 997 |
| 54004 | 1.4920 | 582 |
| 54005 | 1.0134 | 535 |
| 54006 | 0.7883 | 381 |
| 203343 | 0.3695 | 191 |
| 54002 | 0.2287 | 81 |
| 203346 | 0.1751 | 72 |
| 203347 | 0.1355 | 67 |
Top tissues by expression
294 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| cranial nerve II | UBERON:0000941 | 94.78 | gold quality |
| stromal cell of endometrium | CL:0002255 | 94.52 | gold quality |
| lateral globus pallidus | UBERON:0002476 | 94.02 | gold quality |
| medial globus pallidus | UBERON:0002477 | 93.35 | gold quality |
| globus pallidus | UBERON:0001875 | 92.73 | gold quality |
| entorhinal cortex | UBERON:0002728 | 90.73 | gold quality |
| cartilage tissue | UBERON:0002418 | 90.51 | gold quality |
| endothelial cell | CL:0000115 | 90.50 | gold quality |
| medulla oblongata | UBERON:0001896 | 90.44 | gold quality |
| gingival epithelium | UBERON:0001949 | 90.31 | gold quality |
| dorsal motor nucleus of vagus nerve | UBERON:0002870 | 90.24 | gold quality |
| superior vestibular nucleus | UBERON:0007227 | 90.24 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 89.58 | gold quality |
| ventral tegmental area | UBERON:0002691 | 89.52 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 89.35 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 89.22 | gold quality |
| substantia nigra pars compacta | UBERON:0001965 | 89.21 | gold quality |
| tongue squamous epithelium | UBERON:0006919 | 89.16 | gold quality |
| islet of Langerhans | UBERON:0000006 | 89.06 | gold quality |
| gingiva | UBERON:0001828 | 88.55 | gold quality |
| corpus epididymis | UBERON:0004359 | 88.47 | gold quality |
| subthalamic nucleus | UBERON:0001906 | 88.37 | gold quality |
| inferior olivary complex | UBERON:0002127 | 88.34 | gold quality |
| choroid plexus epithelium | UBERON:0003911 | 88.31 | gold quality |
| trigeminal ganglion | UBERON:0001675 | 87.93 | gold quality |
| corpus callosum | UBERON:0002336 | 87.61 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 86.10 | gold quality |
| postcentral gyrus | UBERON:0002581 | 85.97 | gold quality |
| parietal lobe | UBERON:0001872 | 85.70 | gold quality |
| temporal lobe | UBERON:0001871 | 85.67 | gold quality |
Single-cell (SCXA)
Detected in 12 experiment(s), a significant marker in 8.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-180759 | yes | 2853.02 |
| E-HCAD-29 | yes | 2245.53 |
| E-HCAD-35 | yes | 1301.49 |
| E-GEOD-75688 | yes | 1273.65 |
| E-CURD-7 | yes | 1126.50 |
| E-ENAD-21 | yes | 1126.50 |
| E-MTAB-8142 | yes | 84.13 |
| E-GEOD-81383 | no | 832.56 |
| E-CURD-11 | no | 610.62 |
| E-MTAB-10290 | no | 268.65 |
| E-MTAB-7008 | no | 110.82 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): AP1, ATF4, JUN, NFE2, NFE2L2, NRF1, POU2F1, TCF7L2
miRNA regulators (miRDB)
412 targeting SLC7A11, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-8485 | 100.00 | 77.57 | 4731 |
| HSA-MIR-6867-5P | 100.00 | 82.21 | 3464 |
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-4668-3P | 100.00 | 68.74 | 2635 |
| HSA-MIR-513A-5P | 100.00 | 69.77 | 2465 |
| HSA-MIR-6873-3P | 100.00 | 71.42 | 2626 |
| HSA-MIR-4768-5P | 100.00 | 69.49 | 2861 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-188-3P | 100.00 | 68.76 | 1240 |
| HSA-MIR-7110-3P | 100.00 | 73.18 | 2486 |
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-3924 | 100.00 | 72.09 | 2394 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-4776-3P | 100.00 | 68.73 | 1340 |
| HSA-MIR-656-3P | 100.00 | 72.15 | 2788 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
| HSA-MIR-5692C | 100.00 | 71.32 | 2622 |
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-4476 | 100.00 | 68.18 | 2030 |
| HSA-MIR-6876-5P | 100.00 | 67.68 | 2126 |
Literature-anchored findings (GeneRIF, showing 40)
- Cys(327) is a functionally important residue accessible to the aqueous extracellular environment and is structurally linked to the permeation pathway and/or the substrate binding site (PMID:14722095)
- topological model for xCT of 12 transmembrane domains with the N and C termini located inside the cell (PMID:15151999)
- Expression of Tat led to decrease in glutathione and increase in gamma-glutamyl transpeptidase. The transport function of xc-was upregulated and was accompanied by increases in mRNAs for xCT and 4F2hc and in corresponding protein levels. (PMID:15326101)
- xCT was identified as the receptor mediating KSHV cell fusion; KSHV target cell permissiveness correlated closely with endogenous expression of xCT messenger RNA and protein in diverse cell types (PMID:16574866)
- These results suggest that reduced calcium signaling impairs AP-1 activation and that xCT expression may directly affect cell proliferation. (PMID:18054200)
- Induction of xCT led to glutamate-inhibitable cystine uptake and an increased rate of cysteine release from cells; overexpression of xCT in smooth muscle cells or endothelial cells led to glutamate-inhibitable cysteine release. (PMID:18287333)
- Small interfering RNA-mediated xCT silencing in gliomas inhibits neurodegeneration and alleviates brain edema. (PMID:18469825)
- The results suggest that the x(c)(-) transporter by enhancing glutathione biosynthesis plays a major role in pancreatic cancer growth, therapy resistance and represents a potential therapeutic target for the disease. (PMID:18648370)
- Caveolin-1 was upregulated and beta-catenin was recruited to the plasma membrane when xCT was deficient, which were followed by the inhibition of beta-catenin transcriptional activity. (PMID:19015640)
- long term activation of the phospho-eIF2alpha/ATF4/xCT signaling module by the specific eIF2alpha phosphatase inhibitor, salubrinal, induces resistance against oxidative glutamate toxicity in the hippocampal cell line HT22 and primary cortical neurons (PMID:19017641)
- Expression of xCT is significantly reduced in low-grade oligodendroglial tumours harbouring LOH1p (PMID:19207949)
- x(c)(-) transporter provides a useful target for glioma therapy. (PMID:20007406)
- Review discusses system xc- function in vitro and in vivo, its role as an ambivalent drug target, and the relevance of oxytosis mediated by inhibition of xCT for identification of neuroprotective proteins and signaling pathways. (PMID:20053169)
- The cystine/glutamate antiporter demonstrates its major role of cystine and glutamate transport while modulating intracellular glutathione content and efflux in dendritic cells during cell differentiation and cross-presentation in a transgenic system. (PMID:20733204)
- The pathways modify system activity beyond the level of xCT transcription, including regulation on the level of membrane trafficking and substrate availability, especially the regulation by glutamate transport through excitatory amino acid transporters. (PMID:21369940)
- Data show that SLC7A11 is the direct target of miR-26b and its expression is remarkably increased in both breast cancer cell lines and clinical samples. (PMID:21510944)
- SLC7A11 is a functional target gene of the BACH1 transcription factor according to ChIP-seq and knockdown analysis in HEK 293 cells. (PMID:21555518)
- Results reveal that increased expression of the cystine/glutamate antiporter system xCT in multiple sclerosis provides a link between inflammation and excitotoxicity in demyelinating diseases. (PMID:21639880)
- Both IGF-1 and TGF-beta stimulated system xc-mediated cystine uptake in dental pulp cells. (PMID:21689549)
- These findings suggest that xCT is an independent predictive factor in glioblastomas (PMID:23096413)
- These observations suggest that the expression of xCT in esophageal squamous cell carcinoma (ESCC) cells might affect the G1/S checkpoint and impact on the prognosis of ESCC patients (PMID:23771433)
- the xCT antiporter, which is expressed on one-third of triple-negative breast tumors in this study, may have a role in glutamine updake and dependence (PMID:24094812)
- Our findings indicate that miRNA-27a negatively regulates SLC7A11 in cisplatin-resistant bladder cancer, and shows promise as a marker for patients likely to benefit from cisplatin-based chemotherapy (PMID:24516043)
- IGF-I regulates cystine uptake and cellular redox status by activating the expression and function of xCT in estrogen receptor-positive (ER(+)) breast cancer cells by a mechanism that relies on the IGF receptor substrate-1 (IRS-1). (PMID:24686172)
- Results show that Nrf2 and ATF4 were upregulated by proteasome inhibition and cooperatively enhance human xCT gene expression upon proteasome inhibition. (PMID:25002527)
- Data indicate that cystine-glutamate exchange transporter protein SLC7A11 mRNA is regulated by cellular stress and nonsense-mediated RNA decay (NMD). (PMID:25399695)
- We discovered that many genes involved in oxidative stress/antioxidant defense system, apoptosis/anti-apoptosis/cell death, and cellular response to unfolded proteins/topologically incorrect proteins are potentially regulated by xCT. (PMID:25860939)
- increased SLC7A11 expression predicted shorter malignant glioma patient survival. (PMID:26019222)
- the rate of cystine uptake was significantly faster than the rate of glutamate release in human glioma cells. (PMID:26252954)
- Sulfasalazine, a relatively non-toxic drug that targets cystine transporter, may, in combination with CDDP, be an effective therapy for colorectal cancer. (PMID:26254540)
- Study demonstrated that the mRNA expression levels of the two system xc- subunits, SLC7A11 and SLC3A2, in peripheral white blood cells are lowered in patients with schizophrenia than healthy individuals (PMID:26540405)
- Although LCN2 increased intracellular iron concentrations, LCN2-induced GSH may catalyze and override oxidative stress via CD44 and xCT, and subsequently enhance the survival of clear cell carcinoma tumor cells in oxidative stress-rich environment. (PMID:26729415)
- The most frequent SLC7A7 mutation in Japanese LPI patients is p.R410*, which is a founder effect mutation in northern Japan. (PMID:26865117)
- MUC1-C binds directly with CD44v and in turn promotes stability of xCT in the cell membrane (PMID:26930718)
- High SLC7A11 expression is associated with glioma. (PMID:26980765)
- Authors found that the xCT expression was increased in peripheral blood monocyte of active tuberculosis. xCT expression in macrophage was induced by Mycobacterium tuberculosis (Mtb) through TLR2/Akt- and p38-dependent signaling pathway. (PMID:27129162)
- Mechanistically, CD44v interacts with and stabilizes xCT and thereby promotes the uptake of cysteine for glutathione synthesis and stimulates side-population cell enrichment. (PMID:27279909)
- Results suggest that expression of SLC7A11 in the context of glioma contributes to tumorigenesis, tumor progression, and resistance to standard chemotherapy. (PMID:27658422)
- simultaneous mutations at all four acetylation sites completely abolish its ability to regulate metabolic targets, such as TIGAR and SLC7A11. Moreover, p53(4KR) is still capable of inducing the p53-Mdm2 feedback loop, but p53-dependent ferroptotic responses are markedly abrogated (PMID:27705786)
- Genetic and pharmacological inhibition of xCT potentiated the cytotoxic effects of aspirin plus sorafenib; this effect was diminished by xCT overexpression. Low-dose aspirin plus sorafenib enhanced the cytotoxicity of cisplatin in resistant HNC cells through xCT inhibition and oxidant and DNA damage. (PMID:28057599)
Cross-species orthologs
15 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | slc7a2 | ENSDARG00000037097 |
| danio_rerio | slc7a11 | ENSDARG00000071384 |
| mus_musculus | Slc7a11 | ENSMUSG00000027737 |
| rattus_norvegicus | Slc7a11 | ENSRNOG00000010210 |
| drosophila_melanogaster | mnd | FBGN0002778 |
| drosophila_melanogaster | CG7255 | FBGN0036493 |
| drosophila_melanogaster | CG5535 | FBGN0036764 |
| drosophila_melanogaster | slif | FBGN0037203 |
| drosophila_melanogaster | CG1607 | FBGN0039844 |
| caenorhabditis_elegans | WBGENE00000002 | |
| caenorhabditis_elegans | WBGENE00000003 | |
| caenorhabditis_elegans | WBGENE00000005 | |
| caenorhabditis_elegans | aat-9 | WBGENE00000010 |
| caenorhabditis_elegans | WBGENE00015197 | |
| caenorhabditis_elegans | WBGENE00017747 |
Paralogs (12): SLC7A2 (ENSG00000003989), SLC7A14 (ENSG00000013293), SLC7A9 (ENSG00000021488), SLC7A8 (ENSG00000092068), SLC7A4 (ENSG00000099960), SLC7A6 (ENSG00000103064), SLC7A5 (ENSG00000103257), SLC7A10 (ENSG00000130876), SLC7A1 (ENSG00000139514), SLC7A7 (ENSG00000155465), SLC7A13 (ENSG00000164893), SLC7A3 (ENSG00000165349)
Protein
Protein identifiers
Cystine/glutamate transporter — Q9UPY5 (reviewed: Q9UPY5)
Alternative names: Amino acid transport system xc-, Calcium channel blocker resistance protein CCBR1, Solute carrier family 7 member 11, xCT
All UniProt accessions (2): Q9UPY5, H0Y9F9
UniProt curated annotations — full annotation on UniProt →
Function. Heterodimer with SLC3A2, that functions as an antiporter by mediating the exchange of extracellular anionic L-cystine and intracellular L-glutamate across the cellular plasma membrane. Provides L-cystine for the maintenance of the redox balance between extracellular L-cystine and L-cysteine and for the maintenance of the intracellular levels of glutathione that is essential for cells protection from oxidative stress. The transport is sodium-independent, electroneutral with a stoichiometry of 1:1, and is drove by the high intracellular concentration of L-glutamate and the intracellular reduction of L-cystine. Acts as an inhibitor of ferroptosis by mediating the import of L-kynurenine leading to anti-ferroptotic signaling propagation required to maintain L-cystine and glutathione homeostasis. Also inhibits ferroptosis by acting as an atypical proton transporter that mediates a slow proton efflux from lysosomes via cystine and glutamate flux. Glutamate and cystine contain side-chain groups that are protonatable in the physiological range of lysosomal pH and cytosolic pH, respectively, enabling a slow lysosomal proton leak through a substrate-as-proton mechanism. Moreover, mediates N-acetyl-L-cysteine uptake into the placenta leading to subsequently down-regulation of pathways associated with oxidative stress, inflammation and apoptosis. In vitro can also transport L-aspartate. May participate in astrocyte and meningeal cell proliferation during development and can provide neuroprotection by promoting glutathione synthesis and delivery from non-neuronal cells such as astrocytes and meningeal cells to immature neurons. Controls the production of pheomelanin pigment directly.
Subunit / interactions. Disulfide-linked heterodimer with the amino acid transport protein SLC3A2/4F2hc; this interaction mediates cell membrane localization.
Subcellular location. Cell membrane. Lysosome membrane. Cell projection. Microvillus membrane.
Tissue specificity. Expressed in term placenta and primary term cytotrophoblast. Expressed mainly in the brain, but also in pancreas.
Post-translational modifications. Ubiquitinated by TRIM26; leading to proteasomal degradation.
Activity regulation. Inhibited by erastin and sulfasalazine. Inhibited by (S)-lactate. Inactivated by p-chloromercuribenzoic acid and p-chloromercuribenzenesulfonic acid.
Induction. By oxygen in a concentration-dependent manner. Up-regulated by S-nitroso-N-acetyl-D-penicillamine.
Similarity. Belongs to the amino acid-polyamine-organocation (APC) superfamily. L-type amino acid transporter (LAT) (TC 2.A.3.8) family.
RefSeq proteins (1): NP_055146* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR002293 | AA/rel_permease1 | Family |
| IPR004760 | L_AA_transporter | Family |
| IPR050598 | AminoAcid_Transporter | Family |
Pfam: PF13520
Catalyzed reactions (Rhea), 3 shown:
- L-cystine(out) + L-glutamate(in) = L-cystine(in) + L-glutamate(out) (RHEA:70995)
- an L-alpha-amino acid(in) + L-kynurenine(out) = an L-alpha-amino acid(out) + L-kynurenine(in) (RHEA:71191)
- N-acetyl-L-cysteine(out) + L-glutamate(in) = N-acetyl-L-cysteine(in) + L-glutamate(out) (RHEA:74567)
UniProt features (95 total): helix 23, mutagenesis site 22, topological domain 14, transmembrane region 12, turn 12, strand 5, binding site 2, chain 1, modified residue 1, glycosylation site 1, disulfide bond 1, intramembrane region 1
Structure
Experimental structures (PDB)
4 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 7EPZ | ELECTRON MICROSCOPY | 3.4 |
| 7P9V | ELECTRON MICROSCOPY | 3.4 |
| 7P9U | ELECTRON MICROSCOPY | 3.7 |
| 7CCS | ELECTRON MICROSCOPY | 6.2 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9UPY5-F1 | 85.72 | 0.58 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (2): 135; 244
Post-translational modifications (1): 26
Disulfide bonds (1): 158
Glycosylation sites (1): 314
Mutagenesis-validated functional residues (22):
| Position | Phenotype |
|---|---|
| 86 | does not affect l-cystine transport activity; when associated with s-158; s-197; s-271; s-327; s-414 and s-435. does not |
| 135 | loss of l-cystine transport activity. |
| 158 | does not affect l-cystine transport activity; when associated with s-86; s-197; s-271; s-327; s-414 and s-435. does not |
| 191 | increases sensitivity to erastin-induced ferroptosis. |
| 197 | does not affect l-cystine transport activity; when associated with s-86; s-158; s-271; s-327; s-414 and s-435. does not |
| 198 | loss of l-cystine transport activity. does not affect location at the celle membrane. does not affect expression level. |
| 254 | increases resistance to erastin-induced ferroptosis. decreases sensitivity to erastin-induced inhibition of l-cystine tr |
| 271 | does not affect l-cystine transport activity; when associated with s-86; s-158; s-197; s-327; s-414 and s-435. does not |
| 327 | does not affect l-glutamate transport activity. does not affect location at cell membrane does not affect expression lev |
| 327 | loss of l-glutamate transport activity. does not affect location at cell membrane. does not affect expression level. |
| 327 | does not affect l-cystine transport activity; when associated with s-86; s-158; s-197; s-271; s-414 and s-435. does not |
| 327 | does not affect l-glutamate transport activity. does not affect location at cell membrane. does not affect expression le |
| 336 | decreases l-cystine transport activity about 50%. increases sensitivity to erastin-induced ferroptosis. significantly de |
| 336 | does not affect l-cystine transport activity. |
| 388–389 | decreased localization to lysosomes; when associated with s-409. |
| 396 | loss of l-cystine transport activity. |
| 409 | decreased localization to lysosomes; when associated with 388-a-a-389. |
| 414 | does not affect l-cystine transport activity; when associated with s-86; s-158; s-197; s-271; s-327 and s-435. does not |
| 435 | does not affect l-cystine transport activity; when associated with s-86; s-158; s-197; s-271; s-327 and s-414. does not |
Function
Pathways and Gene Ontology
Reactome pathways
3 pathways
| ID | Pathway |
|---|---|
| R-HSA-210991 | Basigin interactions |
| R-HSA-352230 | Amino acid transport across the plasma membrane |
| R-HSA-9818027 | NFE2L2 regulating anti-oxidant/detoxification enzymes |
MSigDB gene sets: 629 (showing top):
GOBP_PHENOL_CONTAINING_COMPOUND_METABOLIC_PROCESS, MODULE_52, RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP, GOBP_COGNITION, GOBP_PHENOL_CONTAINING_COMPOUND_BIOSYNTHETIC_PROCESS, GOBP_BEHAVIOR, MCLACHLAN_DENTAL_CARIES_UP, GOBP_MYELOID_CELL_HOMEOSTASIS, RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP, GOBP_VACUOLE_ORGANIZATION, GOBP_REGULATION_OF_LEUKOCYTE_APOPTOTIC_PROCESS, GOCC_VACUOLAR_MEMBRANE, GOBP_ALPHA_AMINO_ACID_METABOLIC_PROCESS, GOBP_ADULT_BEHAVIOR, GOBP_PLATELET_ACTIVATION
GO Biological Process (39): amino acid transmembrane transport (GO:0003333), glutathione metabolic process (GO:0006749), visual learning (GO:0008542), response to toxic substance (GO:0009636), L-cystine transport (GO:0015811), L-glutamate transmembrane transport (GO:0015813), ventricular system development (GO:0021591), striatum development (GO:0021756), adult behavior (GO:0030534), regulation of neutrophil apoptotic process (GO:0033029), cellular response to oxidative stress (GO:0034599), glutathione transmembrane transport (GO:0034775), lysosomal lumen pH elevation (GO:0035752), regulation of cell population proliferation (GO:0042127), regulation of melanin biosynthetic process (GO:0048021), lung alveolus development (GO:0048286), modulation of chemical synaptic transmission (GO:0050804), regulation of synapse organization (GO:0050807), regulation of protein transport (GO:0051223), response to redox state (GO:0051775), limb development (GO:0060173), platelet aggregation (GO:0070527), intracellular glutamate homeostasis (GO:0090461), L-glutamate import across plasma membrane (GO:0098712), negative regulation of ferroptosis (GO:0110076), dipeptide import across plasma membrane (GO:0140206), L-kynurenine transmembrane transport (GO:0140924), regulation of cellular response to oxidative stress (GO:1900407), obsolete regulation of cysteine metabolic process (GO:1901494), proton transmembrane transport (GO:1902600), regulation of glutathione biosynthetic process (GO:1903786), regulation of AMPA glutamate receptor clustering (GO:1904717), obsolete regulation of glutamate metabolic process (GO:2000211), amino acid transport (GO:0006865), brain development (GO:0007420), cellular response to stress (GO:0033554), regulation of programmed cell death (GO:0043067), transmembrane transport (GO:0055085), L-alpha-amino acid transmembrane transport (GO:1902475)
GO Molecular Function (7): L-amino acid transmembrane transporter activity (GO:0015179), proton channel activity (GO:0015252), cystine:glutamate antiporter activity (GO:0015327), leak channel activity (GO:0022840), L-kynurenine transmembrane transporter activity (GO:0140926), protein binding (GO:0005515), transmembrane transporter activity (GO:0022857)
GO Cellular Component (9): lysosomal membrane (GO:0005765), plasma membrane (GO:0005886), cell surface (GO:0009986), membrane (GO:0016020), brush border membrane (GO:0031526), microvillus membrane (GO:0031528), astrocyte projection (GO:0097449), cell projection (GO:0042995), apical part of cell (GO:0045177)
Reactome top-level categories
Rollup of top-3 pathways:
| Category | Pathways |
|---|---|
| Cell surface interactions at the vascular wall | 1 |
| SLC-mediated transport of amino acids | 1 |
| Nuclear events mediated by NFE2L2 | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| transmembrane transport | 2 |
| L-alpha-amino acid transmembrane transport | 2 |
| anatomical structure development | 2 |
| cell projection membrane | 2 |
| amino acid transport | 1 |
| modified amino acid metabolic process | 1 |
| sulfur compound metabolic process | 1 |
| visual behavior | 1 |
| associative learning | 1 |
| response to chemical | 1 |
| sulfur amino acid transport | 1 |
| neutral amino acid transport | 1 |
| L-amino acid transport | 1 |
| modified amino acid transport | 1 |
| L-glutamate import | 1 |
| brain development | 1 |
| system development | 1 |
| subpallium development | 1 |
| behavior | 1 |
| neutrophil apoptotic process | 1 |
| regulation of immune system process | 1 |
| regulation of myeloid cell apoptotic process | 1 |
| regulation of leukocyte apoptotic process | 1 |
| response to oxidative stress | 1 |
| cellular response to chemical stress | 1 |
| glutathione transport | 1 |
| tripeptide transmembrane transport | 1 |
| intracellular pH elevation | 1 |
| cell population proliferation | 1 |
| regulation of cellular process | 1 |
| melanin biosynthetic process | 1 |
| regulation of secondary metabolite biosynthetic process | 1 |
| lung development | 1 |
| chemical synaptic transmission | 1 |
| regulation of trans-synaptic signaling | 1 |
| regulation of synapse structure or activity | 1 |
| synapse organization | 1 |
| regulation of cellular component organization | 1 |
| protein transport | 1 |
Protein interactions and networks
STRING
1748 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| SLC7A11 | SLC3A2 | P08195 | 999 |
| SLC7A11 | CD44 | P16070 | 985 |
| SLC7A11 | BECN1 | Q14457 | 835 |
| SLC7A11 | GPX4 | P36969 | 819 |
| SLC7A11 | TP53 | P04637 | 711 |
| SLC7A11 | SLC1A2 | P43004 | 694 |
| SLC7A11 | SLC1A5 | Q15758 | 687 |
| SLC7A11 | ACSL4 | O60488 | 676 |
| SLC7A11 | AIFM2 | Q9BRQ8 | 664 |
| SLC7A11 | NFE2L2 | Q16236 | 658 |
| SLC7A11 | GCLC | P48506 | 656 |
| SLC7A11 | GCLM | P48507 | 650 |
| SLC7A11 | SLC3A1 | Q07837 | 633 |
| SLC7A11 | KEAP1 | Q14145 | 611 |
| SLC7A11 | SLC1A1 | P43005 | 603 |
IntAct
71 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| IFT70B | IFT56 | psi-mi:“MI:0914”(association) | 0.790 |
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
| IFT27 | IFT56 | psi-mi:“MI:0914”(association) | 0.690 |
| KRTAP1-3 | SLC7A11 | psi-mi:“MI:0915”(physical association) | 0.560 |
| SLC3A2 | SLC7A11 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRTAP1-1 | SLC7A11 | psi-mi:“MI:0915”(physical association) | 0.560 |
| SLC3A2 | SLC7A11 | psi-mi:“MI:0407”(direct interaction) | 0.550 |
| CD44 | SLC7A11 | psi-mi:“MI:0403”(colocalization) | 0.540 |
| CD44 | SLC7A11 | psi-mi:“MI:0915”(physical association) | 0.540 |
| SLC7A11 | CD44 | psi-mi:“MI:0915”(physical association) | 0.540 |
| TNFSF8 | LGALS8 | psi-mi:“MI:0914”(association) | 0.530 |
| EPHA2 | GOLIM4 | psi-mi:“MI:0914”(association) | 0.530 |
| ARMC6 | SLC27A2 | psi-mi:“MI:0914”(association) | 0.530 |
| NRAS | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.480 |
| ESYT2 | psi-mi:“MI:0914”(association) | 0.350 | |
| MAD2L2 | psi-mi:“MI:0914”(association) | 0.350 | |
| FADD | NUP42 | psi-mi:“MI:0914”(association) | 0.350 |
| TRAF2 | TMEM178B | psi-mi:“MI:0914”(association) | 0.350 |
| NFE2L2 | PLEKHG3 | psi-mi:“MI:0914”(association) | 0.350 |
| NFE2L2 | MYO1D | psi-mi:“MI:0914”(association) | 0.350 |
| CD44 | SLC3A2 | psi-mi:“MI:0914”(association) | 0.350 |
| KLRC2 | CLGN | psi-mi:“MI:0914”(association) | 0.350 |
| CLEC2D | ESYT2 | psi-mi:“MI:0914”(association) | 0.350 |
| APOM | ESYT2 | psi-mi:“MI:0914”(association) | 0.350 |
| CLEC4E | ESYT2 | psi-mi:“MI:0914”(association) | 0.350 |
| KLRB1 | ESYT2 | psi-mi:“MI:0914”(association) | 0.350 |
| KLRD1 | TMEM131L | psi-mi:“MI:0914”(association) | 0.350 |
| SGCA | TMEM131L | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (271): SLC7A11 (Proximity Label-MS), SLC7A11 (Affinity Capture-MS), SLC7A11 (Affinity Capture-MS), SLC7A11 (Proximity Label-MS), SLC7A11 (Proximity Label-MS), SLC7A11 (Affinity Capture-MS), SLC7A11 (Affinity Capture-MS), SLC7A11 (Affinity Capture-MS), SLC7A11 (Proximity Label-MS), SLC7A11 (Proximity Label-MS), SLC7A11 (Proximity Label-MS), SLC7A11 (Affinity Capture-Western), EGFR (Affinity Capture-Western), SLC3A2 (Affinity Capture-MS), OTUB1 (Affinity Capture-MS)
ESM2 similar proteins: A1L3M3, A7MBD8, B3TP03, B5D5N9, D3ZMM8, O08812, O61369, P11170, P13866, P18581, P30823, P30825, P52569, P70423, P83740, Q01650, Q09143, Q1EHB4, Q22397, Q28I80, Q3ZMH1, Q49B93, Q59I64, Q5BL81, Q5PR34, Q5RAE3, Q5RAG7, Q5RKI7, Q63016, Q6DCE8, Q7SYH5, Q7T384, Q7YQK4, Q8BGK6, Q8BYF6, Q8N695, Q8TCU3, Q8WY07, Q91WN3, Q92536
Diamond homologs: A1L3M3, D3ZMM8, O34739, P63115, P63116, P82251, P82252, Q01650, Q22397, Q28I80, Q59I64, Q5RAE3, Q5RAG7, Q5RKI7, Q63016, Q7YQK4, Q8BGK6, Q8MH63, Q8TCU3, Q91WN3, Q92536, Q9GIP4, Q9N1Q4, Q9N1R6, Q9NS82, Q9QXA6, Q9QXW9, Q9R0S5, Q9UHI5, Q9UM01, Q9UPY5, Q9WTR6, Q9WVR6, Q9Z127, Q9Z1K8, Q8VIE6, A0JNI9, A8I499, B0UYF2, B3TP03
SIGNOR signaling
3 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| mTORC2 | “down-regulates activity” | SLC7A11 | phosphorylation |
| NFE2L2 | “up-regulates quantity by expression” | SLC7A11 | “transcriptional regulation” |
| hsa-miR-26a-5p | “down-regulates quantity by destabilization” | SLC7A11 | “post transcriptional regulation” |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 89 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| DAP12 signaling | 5 | 27.9× | 9e-05 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
78 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 64 |
| Likely benign | 5 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1705 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 4:138183198:TCA:T | donor_loss | 1.0000 |
| 4:138183199:CA:C | donor_loss | 1.0000 |
| 4:138183200:ACCT:A | donor_loss | 1.0000 |
| 4:138183201:C:CG | donor_loss | 1.0000 |
| 4:138183301:AAGGT:A | acceptor_gain | 1.0000 |
| 4:138183302:AGGT:A | acceptor_gain | 1.0000 |
| 4:138183303:GGT:G | acceptor_gain | 1.0000 |
| 4:138183304:GT:G | acceptor_gain | 1.0000 |
| 4:138183306:C:CC | acceptor_gain | 1.0000 |
| 4:138183306:CTAGT:C | acceptor_loss | 1.0000 |
| 4:138185114:GACTT:G | donor_loss | 1.0000 |
| 4:138185115:ACTT:A | donor_loss | 1.0000 |
| 4:138185116:CTTAC:C | donor_loss | 1.0000 |
| 4:138185117:T:TC | donor_loss | 1.0000 |
| 4:138185118:T:TA | donor_loss | 1.0000 |
| 4:138185119:A:AC | donor_gain | 1.0000 |
| 4:138185120:C:CC | donor_gain | 1.0000 |
| 4:138185120:C:CT | donor_loss | 1.0000 |
| 4:138185120:CCA:C | donor_gain | 1.0000 |
| 4:138185240:TGGTT:T | acceptor_gain | 1.0000 |
| 4:138185242:GTTCT:G | acceptor_loss | 1.0000 |
| 4:138185243:TT:T | acceptor_gain | 1.0000 |
| 4:138185244:TCT:T | acceptor_loss | 1.0000 |
| 4:138185245:C:CC | acceptor_gain | 1.0000 |
| 4:138185245:C:T | acceptor_loss | 1.0000 |
| 4:138185246:TGAAA:T | acceptor_loss | 1.0000 |
| 4:138214577:CTACT:C | donor_loss | 1.0000 |
| 4:138214578:TACTT:T | donor_loss | 1.0000 |
| 4:138214579:ACTTA:A | donor_loss | 1.0000 |
| 4:138214582:TAC:T | donor_loss | 1.0000 |
AlphaMissense
3235 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 4:138182361:A:G | L351P | 0.997 |
| 4:138183202:C:A | R340M | 0.997 |
| 4:138236347:A:G | W128R | 0.997 |
| 4:138236347:A:T | W128R | 0.997 |
| 4:138236357:A:C | F124L | 0.997 |
| 4:138236357:A:T | F124L | 0.997 |
| 4:138236359:A:G | F124L | 0.997 |
| 4:138182373:C:G | R347P | 0.996 |
| 4:138219267:A:G | W249R | 0.996 |
| 4:138219267:A:T | W249R | 0.996 |
| 4:138236361:G:T | A123D | 0.996 |
| 4:138236406:C:T | G108E | 0.996 |
| 4:138241823:A:G | W83R | 0.996 |
| 4:138241823:A:T | W83R | 0.996 |
| 4:138183202:C:G | R340T | 0.995 |
| 4:138241881:G:C | F63L | 0.995 |
| 4:138241881:G:T | F63L | 0.995 |
| 4:138241883:A:G | F63L | 0.995 |
| 4:138182310:G:T | A368D | 0.994 |
| 4:138214617:G:C | N253K | 0.994 |
| 4:138214617:G:T | N253K | 0.994 |
| 4:138241894:C:T | G59E | 0.994 |
| 4:138179282:C:T | G460E | 0.993 |
| 4:138180675:C:G | R411P | 0.993 |
| 4:138180718:A:G | W397R | 0.993 |
| 4:138180718:A:T | W397R | 0.993 |
| 4:138182379:G:T | A345E | 0.993 |
| 4:138183240:G:C | C327W | 0.993 |
| 4:138223305:A:C | N180K | 0.993 |
| 4:138223305:A:T | N180K | 0.993 |
dbSNP variants (sampled 300 via entrez): RS1000002068 (4:138168985 T>A), RS10000036 (4:138298108 C>T), RS1000008784 (4:138206680 C>A,T), RS1000014212 (4:138257282 T>C), RS1000039819 (4:138206212 C>A), RS1000058422 (4:138252398 C>T), RS1000063434 (4:138302530 T>G), RS1000072668 (4:138205775 A>C), RS1000102055 (4:138307004 T>C), RS1000115876 (4:138275476 A>T), RS10001990 (4:138237737 A>C,T), RS1000209931 (4:138219558 T>C), RS10002145 (4:138252173 G>A,C), RS1000227533 (4:138167971 A>G), RS1000233025 (4:138270844 C>A)
Disease associations
OMIM: gene MIM:607933 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
5 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST006940_143 | Neurociticism | 3.000000e-08 |
| GCST008357_4 | Mood instability | 2.000000e-08 |
| GCST012038_3 | Sleep duration (> 10 hours) | 1.000000e-08 |
| GCST90002381_211 | Eosinophil count | 2.000000e-13 |
| GCST90002382_106 | Eosinophil percentage of white cells | 3.000000e-12 |
EFO canonical traits (4, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0007660 | neuroticism measurement |
| EFO:0008475 | mood instability measurement |
| EFO:0004842 | eosinophil count |
| EFO:0007991 | eosinophil percentage of leukocytes |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1075149 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
3 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 806,876 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL421 | SULFASALAZINE | 4 | 73,629 |
| CHEMBL863 | CYSTEINE | 4 | 733,144 |
| CHEMBL1614646 | SUSALIMOD | 2 | 103 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: transporter — SLC7 family
Most potent curated ligand interactions (2 total), top 2:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| imidazole ketone erastin | Inhibition | 7.52 | pIC50 |
| quisqualate | Inhibition | 5.3 | pIC50 |
ChEMBL bioactivities
25 potent at pChembl≥5 of 49 total, top 22 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 8.40 | IC50 | 4 | nM | CHEMBL3629669 |
| 8.00 | IC50 | 10 | nM | CHEMBL3629579 |
| 8.00 | IC50 | 10 | nM | CHEMBL3629668 |
| 8.00 | IC50 | 10 | nM | CHEMBL5571379 |
| 7.70 | IC50 | 20 | nM | CHEMBL3629578 |
| 7.52 | IC50 | 30 | nM | CHEMBL3629576 |
| 7.52 | IC50 | 30 | nM | CHEMBL3629671 |
| 7.52 | IC50 | 30 | nM | CHEMBL5564194 |
| 7.40 | IC50 | 40 | nM | CHEMBL3629577 |
| 7.22 | IC50 | 60 | nM | CHEMBL3629575 |
| 7.00 | IC50 | 100 | nM | CHEMBL3629670 |
| 7.00 | IC50 | 100 | nM | CHEMBL5590411 |
| 6.85 | IC50 | 140 | nM | ERASTIN |
| 6.80 | IC50 | 160 | nM | SULFASALAZINE |
| 6.70 | IC50 | 200 | nM | ERASTIN |
| 6.52 | IC50 | 300 | nM | CHEMBL3629580 |
| 6.52 | IC50 | 300 | nM | CHEMBL5569941 |
| 6.10 | IC50 | 800 | nM | CHEMBL3629574 |
| 5.37 | IC50 | 4300 | nM | CHEMBL5394859 |
| 5.37 | IC50 | 4300 | nM | CHEMBL5395544 |
| 5.30 | IC50 | 5000 | nM | QUISQUALATE |
| 5.30 | IC50 | 5000 | nM | CHEMBL94990 |
PubChem BioAssay actives
21 with measured affinity, of 160 total; 19 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 2-[[4-[2-(4-chlorophenoxy)acetyl]piperazin-1-yl]methyl]-3-[5-[2-[4-[(4-methoxyphenyl)methyl]piperazin-1-yl]acetyl]-2-propan-2-yloxyphenyl]quinazolin-4-one | 1252343: Inhibition of Xct in human CCF-STTG1 cells assessed as glutamate release after 2 hrs by fluorometry | ic50 | 0.0040 | uM |
| 2-[[4-[2-(4-chlorophenoxy)acetyl]piperazin-1-yl]methyl]-3-[5-(2-morpholin-4-ylacetyl)-2-propan-2-yloxyphenyl]quinazolin-4-one | 1252343: Inhibition of Xct in human CCF-STTG1 cells assessed as glutamate release after 2 hrs by fluorometry | ic50 | 0.0100 | uM |
| 2-[[4-[2-(4-chlorophenoxy)acetyl]piperazin-1-yl]methyl]-3-[2-propan-2-yloxy-5-[2-(4-prop-2-enylpiperazin-1-yl)acetyl]phenyl]quinazolin-4-one | 1252343: Inhibition of Xct in human CCF-STTG1 cells assessed as glutamate release after 2 hrs by fluorometry | ic50 | 0.0100 | uM |
| 2-[[4-[2-(4-chlorophenoxy)acetyl]piperazin-1-yl]methyl]-3-[4-(2-morpholin-4-ylacetyl)-2-propan-2-yloxyphenyl]quinazolin-4-one | 2106962: Inhibition of Xc- in human HT-1080 cells assessed as decrease in glutamate release incubated for 2 hrs by Amplex red assay | ic50 | 0.0100 | uM |
| 2-[[4-[2-(4-chlorophenoxy)acetyl]piperazin-1-yl]methyl]-3-[2-propan-2-yloxy-5-(2,2,2-trifluoroacetyl)phenyl]quinazolin-4-one | 1252343: Inhibition of Xct in human CCF-STTG1 cells assessed as glutamate release after 2 hrs by fluorometry | ic50 | 0.0200 | uM |
| 3-(5-acetyl-2-propan-2-yloxyphenyl)-2-[[4-[2-(4-chlorophenoxy)acetyl]piperazin-1-yl]methyl]quinazolin-4-one | 1252343: Inhibition of Xct in human CCF-STTG1 cells assessed as glutamate release after 2 hrs by fluorometry | ic50 | 0.0300 | uM |
| 2-[[4-[2-(4-chlorophenoxy)acetyl]piperazin-1-yl]methyl]-3-[4-(2-imidazol-1-ylacetyl)-2-propan-2-yloxyphenyl]quinazolin-4-one | 2106962: Inhibition of Xc- in human HT-1080 cells assessed as decrease in glutamate release incubated for 2 hrs by Amplex red assay | ic50 | 0.0300 | uM |
| 2-[[4-[2-(4-chlorophenoxy)acetyl]piperazin-1-yl]methyl]-3-[5-(2-imidazol-1-ylacetyl)-2-propan-2-yloxyphenyl]quinazolin-4-one | 1252343: Inhibition of Xct in human CCF-STTG1 cells assessed as glutamate release after 2 hrs by fluorometry | ic50 | 0.0300 | uM |
| 2-[[4-[2-(4-chlorophenoxy)acetyl]piperazin-1-yl]methyl]-3-[5-(2-fluoroacetyl)-2-propan-2-yloxyphenyl]quinazolin-4-one | 1252343: Inhibition of Xct in human CCF-STTG1 cells assessed as glutamate release after 2 hrs by fluorometry | ic50 | 0.0400 | uM |
| 3-[2-[[4-[2-(4-chlorophenoxy)acetyl]piperazin-1-yl]methyl]-4-oxoquinazolin-3-yl]-4-propan-2-yloxybenzaldehyde | 1252343: Inhibition of Xct in human CCF-STTG1 cells assessed as glutamate release after 2 hrs by fluorometry | ic50 | 0.0600 | uM |
| 2-[[4-[2-(4-chlorophenoxy)acetyl]piperazin-1-yl]methyl]-3-[5-(2-piperazin-1-ylacetyl)-2-propan-2-yloxyphenyl]quinazolin-4-one | 1252343: Inhibition of Xct in human CCF-STTG1 cells assessed as glutamate release after 2 hrs by fluorometry | ic50 | 0.1000 | uM |
| 2-[[4-[2-(4-chlorophenoxy)acetyl]piperazin-1-yl]methyl]-3-[4-(2-piperazin-1-ylacetyl)-2-propan-2-yloxyphenyl]quinazolin-4-one | 2106962: Inhibition of Xc- in human HT-1080 cells assessed as decrease in glutamate release incubated for 2 hrs by Amplex red assay | ic50 | 0.1000 | uM |
| 2-[1-[4-[2-(4-chlorophenoxy)acetyl]piperazin-1-yl]ethyl]-3-(2-ethoxyphenyl)quinazolin-4-one | 1534338: Inhibition of cystine/glutamate antiporter system xc- in human Calu1 cells assessed as reduction in L-[3,3’-14C]-cystine uptake in presence of Na+ free uptake buffer by scintillation counting assay | ic50 | 0.1400 | uM |
| 2-hydroxy-5-[[4-(pyridin-2-ylsulfamoyl)phenyl]diazenyl]benzoic acid | 1534336: Inhibition of xCT-mediated cystein/glutamate transporter (unknown origin) assessed as reduction in L-[14C]cyctein uptake | ic50 | 0.1600 | uM |
| 2-[[4-[2-(4-chlorophenoxy)acetyl]piperazin-1-yl]methyl]-3-[5-[2-(4-methylpiperazin-1-yl)acetyl]-2-propan-2-yloxyphenyl]quinazolin-4-one | 1252343: Inhibition of Xct in human CCF-STTG1 cells assessed as glutamate release after 2 hrs by fluorometry | ic50 | 0.3000 | uM |
| 2-[[4-[2-(4-chlorophenoxy)acetyl]piperazin-1-yl]methyl]-3-[4-[2-(4-methylpiperazin-1-yl)acetyl]-2-propan-2-yloxyphenyl]quinazolin-4-one | 2106962: Inhibition of Xc- in human HT-1080 cells assessed as decrease in glutamate release incubated for 2 hrs by Amplex red assay | ic50 | 0.3000 | uM |
| 2-[[4-[2-(4-chlorophenoxy)acetyl]piperazin-1-yl]methyl]-3-[5-(piperazin-1-ylmethyl)-2-propan-2-yloxyphenyl]quinazolin-4-one | 1252343: Inhibition of Xct in human CCF-STTG1 cells assessed as glutamate release after 2 hrs by fluorometry | ic50 | 0.8000 | uM |
| (2S)-2-amino-3-(3,5-dioxo-1,2,4-oxadiazolidin-2-yl)propanoic acid | 475922: Inhibition of amino acid transport system xc- | ic50 | 5.0000 | uM |
| 4-[(S)-amino(carboxy)methyl]benzoic acid | 475922: Inhibition of amino acid transport system xc- | ic50 | 5.0000 | uM |
CTD chemical–gene interactions
359 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | increases abundance, affects methylation, affects cotreatment, increases expression, decreases expression | 16 |
| ferrostatin-1 | affects reaction, decreases expression, decreases reaction, increases expression, affects expression | 10 |
| Estradiol | affects expression, affects cotreatment, decreases expression, increases expression | 10 |
| Valproic Acid | increases expression, affects expression, decreases expression, affects cotreatment | 10 |
| bisphenol A | affects expression, increases expression, decreases expression | 9 |
| Benzo(a)pyrene | affects expression, decreases expression, increases expression | 9 |
| Cisplatin | decreases expression, decreases response to substance, increases expression, decreases reaction, affects reaction (+5 more) | 9 |
| Cyclosporine | increases expression | 9 |
| Arsenic Trioxide | increases expression, decreases response to substance | 8 |
| Tobacco Smoke Pollution | increases expression | 7 |
| Particulate Matter | decreases expression, decreases reaction, increases abundance, increases expression | 7 |
| methylmercuric chloride | increases expression, affects response to substance | 6 |
| Air Pollutants | increases expression, affects cotreatment, decreases expression, increases abundance | 6 |
| Arsenic | affects methylation, decreases expression, increases expression, affects cotreatment, increases abundance | 6 |
| lead acetate | increases expression, affects cotreatment | 5 |
| perfluorooctanoic acid | increases expression | 5 |
| Cadmium | increases abundance, increases expression, decreases expression | 5 |
| Tunicamycin | increases expression | 5 |
| Aflatoxin B1 | affects expression, decreases expression, decreases methylation, increases expression | 5 |
| deoxynivalenol | decreases reaction, decreases expression, increases reaction | 4 |
| Acetaminophen | affects expression, affects cotreatment, increases expression | 4 |
| Deferoxamine | affects expression, affects reaction, decreases expression, decreases reaction | 4 |
| Hydrogen Peroxide | increases activity, increases uptake, affects expression, decreases expression, increases expression (+3 more) | 4 |
| Oxygen | increases expression, affects reaction, decreases expression, decreases abundance | 4 |
| Paraquat | decreases reaction, affects cotreatment, increases expression, decreases expression | 4 |
| Tetrachlorodibenzodioxin | affects cotreatment, increases expression, affects expression, decreases expression | 4 |
| Cadmium Chloride | decreases expression, increases abundance, increases expression | 4 |
| trichostatin A | increases expression, affects cotreatment | 3 |
| cinnamaldehyde | increases expression | 3 |
| mono-(2-ethylhexyl)phthalate | decreases expression, increases expression, increases reaction | 3 |
ChEMBL screening assays
72 unique, capped per target: 72 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1072817 | Binding | Inhibition of amino acid transport system xc- in human SNB19 cells assessed as [3H]L-glutamate uptake at 250 uM by liquid scintillation counting | Isoxazole analogues bind the system xc- transporter: structure-activity relationship and pharmacophore model. — Bioorg Med Chem |
Cellosaurus cell lines
6 cell lines: 6 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B7V7 | Abcam Hep-G2 SLC7A11 KO | Cancer cell line | Male |
| CVCL_D4QG | HCT116-SLC7A11-KO-c11 | Cancer cell line | Male |
| CVCL_D8AK | Ubigene A-549 SLC7A11 KO | Cancer cell line | Male |
| CVCL_E0P1 | Ubigene HeLa SLC7A11 KO | Cancer cell line | Female |
| CVCL_E1E5 | Ubigene U-251 MG SLC7A11 KO | Cancer cell line | Male |
| CVCL_E1ER | Ubigene U-87 MG SLC7A11 KO | Cancer cell line | Male |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.