SLC9A3-AS2

Summary

SLC9A3-AS2 (SLC9A3 antisense RNA 2, HGNC:58987) is a long non-coding RNA gene on chromosome 5p15.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58987
Approved symbol	SLC9A3-AS2
Name	SLC9A3 antisense RNA 2
Location	5p15.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000250385
Ensembl biotype	lncRNA
Entrez	107986395

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000515085, ENST00000652670

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000515085 — 2 exons

Exon	Start	End
ENSE00002064387	526412	526594
ENSE00002077071	524705	524963

Expression profiles

Bgee: expression breadth broad, 84 present calls, max score 77.73.

Top tissues by expression

84 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
muscle tissue	UBERON:0002385	77.73	gold quality
tibial nerve	UBERON:0001323	72.29	gold quality
right hemisphere of cerebellum	UBERON:0014890	71.48	gold quality
cerebellum	UBERON:0002037	67.99	gold quality
cerebellar cortex	UBERON:0002129	67.81	gold quality
cerebellar hemisphere	UBERON:0002245	67.58	gold quality
adult mammalian kidney	UBERON:0000082	65.72	gold quality
kidney	UBERON:0002113	65.23	gold quality
hindlimb stylopod muscle	UBERON:0004252	64.92	gold quality
mucosa of transverse colon	UBERON:0004991	64.67	gold quality
bone marrow cell	CL:0002092	64.45	silver quality
metanephros cortex	UBERON:0010533	63.74	gold quality
cortex of kidney	UBERON:0001225	63.69	gold quality
brain	UBERON:0000955	55.80	gold quality
body of stomach	UBERON:0001161	55.17	gold quality
gall bladder	UBERON:0002110	54.89	gold quality
stomach	UBERON:0000945	54.83	gold quality
fundus of stomach	UBERON:0001160	54.46	gold quality
sural nerve	UBERON:0015488	54.31	silver quality
left coronary artery	UBERON:0001626	53.51	gold quality
multicellular organism	UBERON:0000468	52.99	gold quality
prefrontal cortex	UBERON:0000451	52.20	gold quality
monocyte	CL:0000576	51.16	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	51.14	gold quality
duodenum	UBERON:0002114	50.75	gold quality
blood	UBERON:0000178	50.56	gold quality
muscle of leg	UBERON:0001383	49.18	gold quality
primary visual cortex	UBERON:0002436	49.14	silver quality
transverse colon	UBERON:0001157	48.91	gold quality
frontal cortex	UBERON:0001870	48.81	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.06

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.