SMG7-AS1

Summary

SMG7-AS1 (SMG7 antisense RNA 1, HGNC:24518) is a long non-coding RNA gene on chromosome 1q25.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:24518
Approved symbol	SMG7-AS1
Name	SMG7 antisense RNA 1
Location	1q25.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	DKFZP564C196
Ensembl gene	ENSG00000232860
Ensembl biotype	lncRNA
Entrez	284649
RNAcentral	URS000075EEAE — lncRNA, 2468 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 43 — 42 lncRNA, 1 TEC

ENST00000421703, ENST00000432837, ENST00000624060, ENST00000663067, ENST00000773644, ENST00000773645, ENST00000773646, ENST00000773647, ENST00000773648, ENST00000773649, ENST00000773650, ENST00000773651, ENST00000773652, ENST00000773653, ENST00000773654, ENST00000773655, ENST00000773656, ENST00000773657, ENST00000773658, ENST00000773659, ENST00000773660, ENST00000773661, ENST00000773662, ENST00000773663, ENST00000773664, ENST00000773665, ENST00000773666, ENST00000773667, ENST00000773668, ENST00000773669, ENST00000773670, ENST00000773671, ENST00000773672, ENST00000773673, ENST00000773674, ENST00000773675, ENST00000773676, ENST00000773677, ENST00000773678, ENST00000773679, ENST00000773680, ENST00000773681, ENST00000773682

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000421703 — 5 exons

Exon	Start	End
ENSE00001609531	183460874	183461668
ENSE00001661855	183470720	183471746
ENSE00001712893	183469674	183469799
ENSE00001743854	183461766	183461961
ENSE00001762964	183470465	183470540

Expression profiles

Bgee: expression breadth ubiquitous, 160 present calls, max score 93.55.

Top tissues by expression

287 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	93.55	gold quality
male germ cell	CL:0000015	90.56	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	90.02	gold quality
left testis	UBERON:0004533	84.69	gold quality
right testis	UBERON:0004534	84.07	gold quality
testis	UBERON:0000473	81.80	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.84	gold quality
sural nerve	UBERON:0015488	69.49	gold quality
granulocyte	CL:0000094	68.06	gold quality
ventricular zone	UBERON:0003053	63.09	gold quality
stromal cell of endometrium	CL:0002255	62.96	gold quality
right uterine tube	UBERON:0001302	62.11	gold quality
cortical plate	UBERON:0005343	61.87	gold quality
ganglionic eminence	UBERON:0004023	59.86	gold quality
bone marrow cell	CL:0002092	59.54	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	59.52	gold quality
hindlimb stylopod muscle	UBERON:0004252	58.78	gold quality
islet of Langerhans	UBERON:0000006	57.55	gold quality
lower esophagus mucosa	UBERON:0035834	57.13	gold quality
monocyte	CL:0000576	56.97	gold quality
mononuclear cell	CL:0000842	56.88	gold quality
right atrium auricular region	UBERON:0006631	54.63	gold quality
gall bladder	UBERON:0002110	54.50	gold quality
embryo	UBERON:0000922	54.40	gold quality
left ovary	UBERON:0002119	54.38	gold quality
adult organism	UBERON:0007023	54.28	gold quality
cardiac atrium	UBERON:0002081	54.23	gold quality
body of stomach	UBERON:0001161	53.64	gold quality
prefrontal cortex	UBERON:0000451	53.53	gold quality
left lobe of thyroid gland	UBERON:0001120	53.31	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.85

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.