SNAP47-AS1

Summary

SNAP47-AS1 (SNAP47 antisense RNA 1, HGNC:41501) is a long non-coding RNA gene on chromosome 1q42.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41501
Approved symbol	SNAP47-AS1
Name	SNAP47 antisense RNA 1
Location	1q42.13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000230005
Ensembl biotype	lncRNA
Entrez	100885800
RNAcentral	URS000077CDC1 — lncRNA, 1708 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000413347

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000413347 — 2 exons

Exon	Start	End
ENSE00001770305	227745775	227747191
ENSE00002251452	227743831	227744121

Expression profiles

Bgee: expression breadth broad, 80 present calls, max score 57.58.

Top tissues by expression

80 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ganglionic eminence	UBERON:0004023	57.58	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	55.97	gold quality
hindlimb stylopod muscle	UBERON:0004252	54.19	silver quality
lymph node	UBERON:0000029	52.23	silver quality
muscle of leg	UBERON:0001383	51.26	silver quality
islet of Langerhans	UBERON:0000006	50.03	gold quality
liver	UBERON:0002107	49.60	silver quality
gastrocnemius	UBERON:0001388	48.28	silver quality
right lobe of liver	UBERON:0001114	47.44	silver quality
prefrontal cortex	UBERON:0000451	47.41	silver quality
right adrenal gland	UBERON:0001233	47.25	gold quality
blood	UBERON:0000178	46.88	silver quality
right adrenal gland cortex	UBERON:0035827	46.83	gold quality
gall bladder	UBERON:0002110	46.79	silver quality
left adrenal gland cortex	UBERON:0035825	46.32	gold quality
duodenum	UBERON:0002114	46.15	silver quality
saliva-secreting gland	UBERON:0001044	45.90	silver quality
adrenal gland	UBERON:0002369	45.78	gold quality
left adrenal gland	UBERON:0001234	45.33	gold quality
cerebellum	UBERON:0002037	44.77	silver quality
heart left ventricle	UBERON:0002084	43.92	silver quality
heart	UBERON:0000948	43.80	silver quality
superior frontal gyrus	UBERON:0002661	43.76	silver quality
left ovary	UBERON:0002119	43.61	silver quality
fundus of stomach	UBERON:0001160	43.46	silver quality
ovary	UBERON:0000992	43.35	silver quality
body of pancreas	UBERON:0001150	43.33	silver quality
cerebellar cortex	UBERON:0002129	43.05	silver quality
right testis	UBERON:0004534	43.05	gold quality
myometrium	UBERON:0001296	42.53	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.49

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.