SNAR-C3

Summary

SNAR-C3 (small NF90 (ILF3) associated RNA C3, HGNC:34321) is a gene on chromosome 19q13.32.

Predicted to be located in cytoplasm and nucleus.

Source: NCBI Gene 100170226 — RefSeq curated summary.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:34321
Approved symbol	SNAR-C3
Name	small NF90 (ILF3) associated RNA C3
Location	19q13.32
Locus type	RNA, misc
Status	Approved
Entrez	100170226
RNAcentral	URS000041911A — ncRNA, 119 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS11490518 (19:47948665 G>C), RS11490519 (19:47948687 G>A), RS1156268095 (19:47950257 C>G,T), RS1156383782 (19:47949211 A>T), RS1156614378 (19:47949567 A>G,T), RS1157894617 (19:47949742 C>G), RS1158081766 (19:47950467 A>C), RS1159882370 (19:47949753 G>A), RS1159993639 (19:47950592 C>A,T), RS1162191263 (19:47950302 C>A,G,T), RS1164481506 (19:47949551 T>C), RS1164754960 (19:47949392 G>A), RS1165208319 (19:47950344 G>GT), RS1166266931 (19:47949378 G>A,T), RS1166478907 (19:47950775 C>A,T)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 1 entry (VIP=true, CPIC=false)

CTD chemical–gene interactions

3 total (human), top 3 by PubMed support.

Chemical	Actions (top 5)	PubMed papers
2-methyl-4-isothiazolin-3-one	increases expression	1
didecyldimethylammonium	decreases expression	1
Malathion	decreases expression	1

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.