SNAR-H

Summary

SNAR-H (small NF90 (ILF3) associated RNA H, HGNC:34329) is a gene on chromosome 2p12.

At a glance

• GWAS associations: 3

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:34329
Approved symbol	SNAR-H
Name	small NF90 (ILF3) associated RNA H
Location	2p12
Locus type	RNA, misc
Status	Approved
Aliases	snaR-2
Entrez	100170221
RNAcentral	URS0000216B3C — ncRNA, 120 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1002043834 (2:77956032 T>G), RS1004345187 (2:77956761 A>G), RS1004750636 (2:77955962 C>T), RS1005438274 (2:77954563 C>T), RS1006110569 (2:77956493 G>A,C,T), RS1006864582 (2:77956708 G>A), RS1006916881 (2:77956999 C>A,T), RS1008197594 (2:77956537 T>C), RS1010647050 (2:77956201 G>A), RS1011011650 (2:77956061 T>G), RS1011567066 (2:77956234 T>C), RS1012071735 (2:77955148 C>A,T), RS1014454021 (2:77956479 A>C,T), RS1015307190 (2:77955235 A>G), RS1015410422 (2:77955669 G>C,T)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

3 associations (top):

Study	Trait	p-value
GCST002942_8	Percentage gas trapping	5.000000e-07
GCST002986_1	Childhood and early adolescence aggressive behavior	5.000000e-08
GCST004068_55	Venous thromboembolism adjusted for sickle cell variant rs77121243-T	7.000000e-06

EFO canonical traits (1, from GWAS)

EFO ID	Trait name
EFO:0007628	gas trapping measurement

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 1 entry (VIP=true, CPIC=false)

CTD chemical–gene interactions

9 total (human), top 9 by PubMed support.

Chemical	Actions (top 5)	PubMed papers
2-methyl-4-isothiazolin-3-one	increases expression	1
didecyldimethylammonium	decreases expression	1
Glycerol	affects cotreatment, increases expression	1
Nicotine	affects cotreatment, increases expression	1
Rotenone	decreases expression	1
Silicon Dioxide	decreases expression	1
Tobacco Smoke Pollution	increases expression	1
Cadmium Chloride	decreases expression	1
Propylene Glycol	affects cotreatment, increases expression	1

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.