SNCAIP-AS2

Summary

SNCAIP-AS2 (SNCAIP antisense RNA 2, HGNC:58184) is a long non-coding RNA gene on chromosome 5q23.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58184
Approved symbol	SNCAIP-AS2
Name	SNCAIP antisense RNA 2
Location	5q23.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249621
Ensembl biotype	lncRNA
Entrez	139281641
RNAcentral	URS0002A5EE79 — lncRNA, 664 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000512105, ENST00000721254, ENST00000721255, ENST00000721256

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000512105 — 2 exons

Exon	Start	End
ENSE00002021269	122323320	122323358
ENSE00002077369	122321291	122321834

Expression profiles

Bgee: expression breadth ubiquitous, 102 present calls, max score 97.93.

Top tissues by expression

102 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right uterine tube	UBERON:0001302	97.93	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.63	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	79.25	gold quality
fallopian tube	UBERON:0003889	77.46	gold quality
right lung	UBERON:0002167	67.68	gold quality
calcaneal tendon	UBERON:0003701	67.61	gold quality
ganglionic eminence	UBERON:0004023	65.76	gold quality
ventricular zone	UBERON:0003053	65.71	gold quality
corpus callosum	UBERON:0002336	63.66	gold quality
lung	UBERON:0002048	63.01	gold quality
endocervix	UBERON:0000458	62.05	gold quality
left uterine tube	UBERON:0001303	61.18	gold quality
upper lobe of left lung	UBERON:0008952	60.80	gold quality
skeletal muscle tissue	UBERON:0001134	59.51	silver quality
stromal cell of endometrium	CL:0002255	59.12	gold quality
endometrium	UBERON:0001295	57.42	gold quality
islet of Langerhans	UBERON:0000006	57.19	gold quality
caudate nucleus	UBERON:0001873	57.13	gold quality
Ammon’s horn	UBERON:0001954	56.60	gold quality
liver	UBERON:0002107	56.02	silver quality
urinary bladder	UBERON:0001255	55.44	gold quality
prefrontal cortex	UBERON:0000451	55.24	gold quality
monocyte	CL:0000576	55.12	gold quality
uterine cervix	UBERON:0000002	55.12	gold quality
kidney	UBERON:0002113	54.98	gold quality
blood	UBERON:0000178	54.03	gold quality
amygdala	UBERON:0001876	53.44	gold quality
tonsil	UBERON:0002372	52.94	silver quality
hypothalamus	UBERON:0001898	52.69	gold quality
ovary	UBERON:0000992	52.58	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	8.59

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.