SND1-DT

Summary

SND1-DT (SND1 divergent transcript, HGNC:55639) is a long non-coding RNA gene on chromosome 7q32.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55639
Approved symbol	SND1-DT
Name	SND1 divergent transcript
Location	7q32.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000240790
Ensembl biotype	lncRNA
Entrez	121832805
RNAcentral	URS00026A1CB7 — lncRNA, 326 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000490314, ENST00000691038, ENST00000701795, ENST00000836785, ENST00000836786, ENST00000836787

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000490314 — 3 exons

Exon	Start	End
ENSE00001860623	127651673	127652012
ENSE00001903614	127645056	127645167
ENSE00001921585	127644685	127644727

Expression profiles

Bgee: expression breadth broad, 94 present calls, max score 84.86.

Top tissues by expression

94 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.86	gold quality
bone marrow cell	CL:0002092	65.09	silver quality
prefrontal cortex	UBERON:0000451	57.29	gold quality
bone marrow	UBERON:0002371	56.93	silver quality
monocyte	CL:0000576	55.26	silver quality
islet of Langerhans	UBERON:0000006	55.26	gold quality
calcaneal tendon	UBERON:0003701	53.52	silver quality
adrenal tissue	UBERON:0018303	53.36	gold quality
placenta	UBERON:0001987	52.70	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	52.33	gold quality
blood	UBERON:0000178	51.81	gold quality
right testis	UBERON:0004534	50.93	gold quality
testis	UBERON:0000473	50.29	gold quality
left testis	UBERON:0004533	50.11	gold quality
muscle of leg	UBERON:0001383	48.94	gold quality
liver	UBERON:0002107	48.81	gold quality
gastrocnemius	UBERON:0001388	47.81	silver quality
granulocyte	CL:0000094	46.58	silver quality
tonsil	UBERON:0002372	45.95	gold quality
left adrenal gland cortex	UBERON:0035825	45.80	gold quality
right lobe of liver	UBERON:0001114	45.79	silver quality
saliva-secreting gland	UBERON:0001044	45.67	gold quality
cerebellar cortex	UBERON:0002129	45.39	silver quality
kidney	UBERON:0002113	45.36	gold quality
multicellular organism	UBERON:0000468	45.18	gold quality
frontal cortex	UBERON:0001870	44.66	gold quality
adult mammalian kidney	UBERON:0000082	44.63	gold quality
smooth muscle tissue	UBERON:0001135	44.43	gold quality
left coronary artery	UBERON:0001626	44.37	silver quality
heart left ventricle	UBERON:0002084	44.34	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.21

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.