SND1-IT1

Summary

SND1-IT1 (SND1 intronic transcript 1, HGNC:24158) is a long non-coding RNA gene on chromosome 7q32.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:24158
Approved symbol	SND1-IT1
Name	SND1 intronic transcript 1
Location	7q32.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	NAG8, NSG-X
Ensembl gene	ENSG00000279078
Ensembl biotype	lncRNA
Entrez	27099
RNAcentral	URS000075E1A9 — lncRNA, 2569 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000623342

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000623342 — 1 exons

Exon	Start	End
ENSE00003757669	127997597	128000077

Expression profiles

Bgee: expression breadth broad, 100 present calls, max score 82.95.

Top tissues by expression

110 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.95	gold quality
bone marrow cell	CL:0002092	80.79	gold quality
cerebellar vermis	UBERON:0004720	75.65	silver quality
tonsil	UBERON:0002372	74.04	gold quality
testis	UBERON:0000473	73.85	gold quality
urinary bladder	UBERON:0001255	73.29	gold quality
colonic epithelium	UBERON:0000397	73.26	gold quality
bone marrow	UBERON:0002371	71.90	gold quality
skeletal muscle tissue	UBERON:0001134	71.34	gold quality
liver	UBERON:0002107	70.60	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	68.09	gold quality
endometrium epithelium	UBERON:0004811	65.65	gold quality
uterine cervix	UBERON:0000002	65.36	gold quality
quadriceps femoris	UBERON:0001377	64.53	gold quality
sural nerve	UBERON:0015488	63.04	silver quality
hindlimb stylopod muscle	UBERON:0004252	62.79	gold quality
placenta	UBERON:0001987	62.29	gold quality
superior frontal gyrus	UBERON:0002661	61.66	gold quality
blood	UBERON:0000178	61.08	gold quality
vastus lateralis	UBERON:0001379	60.35	gold quality
cortical plate	UBERON:0005343	59.35	gold quality
primary visual cortex	UBERON:0002436	59.26	gold quality
ventricular zone	UBERON:0003053	58.24	silver quality
epithelium of bronchus	UBERON:0002031	58.19	gold quality
prefrontal cortex	UBERON:0000451	58.06	gold quality
thymus	UBERON:0002370	57.59	silver quality
ganglionic eminence	UBERON:0004023	56.91	silver quality
adrenal tissue	UBERON:0018303	56.59	gold quality
corpus callosum	UBERON:0002336	56.48	gold quality
frontal cortex	UBERON:0001870	56.05	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.95

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• Exosome-mediated lncRNA SND1-IT1 from gastric cancer cells enhances malignant transformation of gastric mucosa cells via up-regulating SNAIL1. (PMID:35739527)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.