SNHG19

Summary

SNHG19 (small nucleolar RNA host gene 19, HGNC:49574) is a long non-coding RNA gene on chromosome 16p13.3.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 100507303 — RefSeq curated summary.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49574
Approved symbol	SNHG19
Name	small nucleolar RNA host gene 19
Location	16p13.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	SNORD60HG
Ensembl gene	ENSG00000260260
Ensembl biotype	lncRNA
Entrez	100507303
RNAcentral	URS00008E39F5 — lncRNA, 357 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000563192, ENST00000686899, ENST00000720507, ENST00000720508

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000563192 — 2 exons

Exon	Start	End
ENSE00004039293	2155143	2155427
ENSE00004039294	2154790	2154922

Expression profiles

Bgee: expression breadth ubiquitous, 136 present calls, max score 99.03.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 17.3797 / max 342.6100, expressed in 1749 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
155903	17.3797	1749

Top tissues by expression

137 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
thymus	UBERON:0002370	99.03	gold quality
pituitary gland	UBERON:0000007	98.81	gold quality
adenohypophysis	UBERON:0002196	98.73	gold quality
left ovary	UBERON:0002119	98.68	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	98.46	gold quality
right uterine tube	UBERON:0001302	98.44	gold quality
right ovary	UBERON:0002118	97.95	gold quality
ovary	UBERON:0000992	97.94	gold quality
left lobe of thyroid gland	UBERON:0001120	97.92	gold quality
body of pancreas	UBERON:0001150	97.87	gold quality
endocervix	UBERON:0000458	97.69	gold quality
right lobe of thyroid gland	UBERON:0001119	97.52	gold quality
thyroid gland	UBERON:0002046	97.51	gold quality
minor salivary gland	UBERON:0001830	97.37	gold quality
ectocervix	UBERON:0012249	97.36	gold quality
saliva-secreting gland	UBERON:0001044	97.34	gold quality
mucosa of transverse colon	UBERON:0004991	96.93	gold quality
prostate gland	UBERON:0002367	96.80	gold quality
skin of abdomen	UBERON:0001416	96.79	gold quality
vagina	UBERON:0000996	96.66	gold quality
muscle layer of sigmoid colon	UBERON:0035805	96.66	gold quality
skin of leg	UBERON:0001511	96.62	gold quality
body of uterus	UBERON:0009853	96.45	gold quality
lower esophagus mucosa	UBERON:0035834	96.41	gold quality
zone of skin	UBERON:0000014	96.37	gold quality
right hemisphere of cerebellum	UBERON:0014890	96.30	gold quality
left uterine tube	UBERON:0001303	96.27	gold quality
cerebellar hemisphere	UBERON:0002245	96.27	gold quality
cerebellum	UBERON:0002037	96.25	gold quality
cerebellar cortex	UBERON:0002129	96.24	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	12.01

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.