SNHG30

Summary

SNHG30 (small nucleolar RNA host gene 30, HGNC:52836) is a long non-coding RNA gene on chromosome 17q12.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 105371743 — RefSeq curated summary.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52836
Approved symbol	SNHG30
Name	small nucleolar RNA host gene 30
Location	17q12
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-1094M14.11
Ensembl gene	ENSG00000267321
Ensembl biotype	lncRNA
Entrez	105371743
RNAcentral	URS0000A773AA — lncRNA, 837 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000592381, ENST00000638682, ENST00000659685, ENST00000665667, ENST00000687979

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000592381 — 2 exons

Exon	Start	End
ENSE00002973061	35568120	35568501
ENSE00003986355	35573877	35574792

Expression profiles

Bgee: expression breadth ubiquitous, 136 present calls, max score 87.07.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 8.3336 / max 97.5973, expressed in 1734 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
160356	8.0576	1726
160357	0.1856	68
160358	0.0904	35

Top tissues by expression

138 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
thymus	UBERON:0002370	87.07	gold quality
monocyte	CL:0000576	85.10	gold quality
leukocyte	CL:0000738	84.46	gold quality
islet of Langerhans	UBERON:0000006	84.17	gold quality
cerebellar hemisphere	UBERON:0002245	81.34	gold quality
cerebellar cortex	UBERON:0002129	81.28	gold quality
cerebellum	UBERON:0002037	81.23	gold quality
cortical plate	UBERON:0005343	80.82	gold quality
right hemisphere of cerebellum	UBERON:0014890	80.44	gold quality
gastrocnemius	UBERON:0001388	80.26	gold quality
muscle of leg	UBERON:0001383	79.94	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	79.94	gold quality
nucleus accumbens	UBERON:0001882	79.73	gold quality
prefrontal cortex	UBERON:0000451	79.69	gold quality
amygdala	UBERON:0001876	79.55	gold quality
temporal lobe	UBERON:0001871	79.48	gold quality
right lung	UBERON:0002167	79.48	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.44	gold quality
adenohypophysis	UBERON:0002196	79.41	gold quality
ventricular zone	UBERON:0003053	79.38	gold quality
putamen	UBERON:0001874	79.29	gold quality
hindlimb stylopod muscle	UBERON:0004252	79.20	gold quality
spinal cord	UBERON:0002240	79.12	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	79.11	gold quality
ganglionic eminence	UBERON:0004023	79.04	gold quality
lower esophagus muscularis layer	UBERON:0035833	79.04	gold quality
popliteal artery	UBERON:0002250	79.03	gold quality
tibial artery	UBERON:0007610	79.03	gold quality
brain	UBERON:0000955	79.02	gold quality
lower esophagus	UBERON:0013473	79.01	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	6.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.