SNORA40C

Summary

SNORA40C (small nucleolar RNA, H/ACA box 40C, HGNC:52205) is a small nucleolar RNA gene on chromosome 6q21.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 109616968 — RefSeq curated summary.

At a glance

• Gene type: non-coding (snoRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52205
Approved symbol	SNORA40C
Name	small nucleolar RNA, H/ACA box 40C
Location	6q21
Locus type	RNA, small nucleolar
Status	Approved
Ensembl gene	ENSG00000212587
Ensembl biotype	snoRNA
Entrez	109616968
RNAcentral	URS000064E0DA — snoRNA, 128 nt, 2 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 snoRNA

ENST00000391285

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000391285 — 1 exons

Exon	Start	End
ENSE00001809021	110848546	110848673

Expression profiles

Bgee: expression breadth broad, 57 present calls, max score 80.07.

Top tissues by expression

57 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	80.07	gold quality
monocyte	CL:0000576	77.46	gold quality
superior frontal gyrus	UBERON:0002661	75.78	gold quality
blood	UBERON:0000178	75.61	gold quality
calcaneal tendon	UBERON:0003701	74.09	gold quality
bone marrow	UBERON:0002371	72.73	gold quality
placenta	UBERON:0001987	71.42	gold quality
body of stomach	UBERON:0001161	70.06	gold quality
stomach	UBERON:0000945	69.73	gold quality
tibial artery	UBERON:0007610	68.36	gold quality
nucleus accumbens	UBERON:0001882	68.16	gold quality
muscle layer of sigmoid colon	UBERON:0035805	67.20	gold quality
gastrocnemius	UBERON:0001388	66.77	gold quality
tibial nerve	UBERON:0001323	66.46	gold quality
left ovary	UBERON:0002119	66.40	gold quality
omental fat pad	UBERON:0010414	66.23	gold quality
esophagus mucosa	UBERON:0002469	65.88	gold quality
right atrium auricular region	UBERON:0006631	65.74	gold quality
urinary bladder	UBERON:0001255	65.27	gold quality
thoracic mammary gland	UBERON:0005200	65.15	gold quality
ascending aorta	UBERON:0001496	65.13	gold quality
thoracic aorta	UBERON:0001515	64.97	gold quality
heart	UBERON:0000948	64.14	gold quality
heart left ventricle	UBERON:0002084	63.56	gold quality
colon	UBERON:0001155	63.47	gold quality
minor salivary gland	UBERON:0001830	63.45	gold quality
lower esophagus muscularis layer	UBERON:0035833	63.32	gold quality
transverse colon	UBERON:0001157	62.99	gold quality
skin of abdomen	UBERON:0001416	62.93	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	62.68	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.66

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Paralogs (21): SNORA40B (ENSG00000208308), SNORA40 (ENSG00000210825), (ENSG00000212134), (ENSG00000212149), (ENSG00000212266), (ENSG00000212273), (ENSG00000212363), (ENSG00000212455), (ENSG00000212579), (ENSG00000222966), (ENSG00000251704), (ENSG00000252049), (ENSG00000252083), (ENSG00000252138), (ENSG00000252188), (ENSG00000252352), (ENSG00000252693), (ENSG00000253047), (ENSG00000253065), (ENSG00000273499), (ENSG00000274458)

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.