SNORA48

Summary

SNORA48 (small nucleolar RNA, H/ACA box 48, HGNC:32641) is a small nucleolar RNA gene on chromosome 17p13.1.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 652965 — RefSeq curated summary.

At a glance

• Gene type: non-coding (snoRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:32641
Approved symbol	SNORA48
Name	small nucleolar RNA, H/ACA box 48
Location	17p13.1
Locus type	RNA, small nucleolar
Status	Approved
Aliases	ACA48, SNORA48A
Ensembl gene	ENSG00000209582
Ensembl biotype	snoRNA
Entrez	652965
RNAcentral	URS0000438819 — snoRNA, 135 nt, 6 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 snoRNA

ENST00000386847

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000386847 — 1 exons

Exon	Start	End
ENSE00001501853	7574713	7574847

Expression profiles

Bgee: expression breadth broad, 90 present calls, max score 99.92.

FANTOM5 (CAGE): breadth broad, TPM avg 0.5512 / max 33.2296, expressed in 277 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
159265	0.5512	277

Top tissues by expression

90 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
adrenal tissue	UBERON:0018303	99.92	gold quality
sural nerve	UBERON:0015488	99.53	gold quality
stomach	UBERON:0000945	85.91	gold quality
kidney	UBERON:0002113	85.34	gold quality
blood	UBERON:0000178	84.06	gold quality
liver	UBERON:0002107	82.75	gold quality
adult mammalian kidney	UBERON:0000082	82.31	gold quality
lung	UBERON:0002048	81.84	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	77.24	gold quality
calcaneal tendon	UBERON:0003701	77.12	gold quality
duodenum	UBERON:0002114	74.30	gold quality
myometrium	UBERON:0001296	73.05	gold quality
monocyte	CL:0000576	71.87	gold quality
islet of Langerhans	UBERON:0000006	71.70	gold quality
heart	UBERON:0000948	71.56	gold quality
urinary bladder	UBERON:0001255	71.50	gold quality
skeletal muscle tissue	UBERON:0001134	70.21	gold quality
omental fat pad	UBERON:0010414	68.88	gold quality
intestine	UBERON:0000160	68.56	gold quality
endometrium	UBERON:0001295	68.14	gold quality
left lobe of thyroid gland	UBERON:0001120	67.89	gold quality
muscle of leg	UBERON:0001383	67.89	gold quality
multicellular organism	UBERON:0000468	67.57	gold quality
vermiform appendix	UBERON:0001154	67.12	gold quality
heart left ventricle	UBERON:0002084	66.45	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	66.35	gold quality
frontal cortex	UBERON:0001870	65.96	gold quality
left ovary	UBERON:0002119	65.57	gold quality
gastrocnemius	UBERON:0001388	65.46	gold quality
ovary	UBERON:0000992	64.94	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Paralogs (12): (ENSG00000212181), SNORA48B (ENSG00000212214), (ENSG00000212228), (ENSG00000212383), (ENSG00000212391), (ENSG00000212445), (ENSG00000212458), (ENSG00000212604), (ENSG00000212626), (ENSG00000252228), (ENSG00000252774), (ENSG00000252824)

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.