SNORD119

Summary

SNORD119 (small nucleolar RNA, C/D box 119, HGNC:33558) is a gene on chromosome 20p13.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:33558
Approved symbol	SNORD119
Name	small nucleolar RNA, C/D box 119
Location	20p13
Locus type	RNA, small nucleolar
Status	Approved
Entrez	100113378
RNAcentral	URS000075EC44 — snoRNA, 96 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1001068628 (20:2462855 A>G,T), RS1003496491 (20:2464483 G>A), RS1005480355 (20:2462513 T>C), RS1008070784 (20:2463395 A>G), RS1008573992 (20:2464895 A>C,T), RS1009470253 (20:2464824 C>G,T), RS1011142275 (20:2464189 A>C), RS1011250846 (20:2462827 C>A,T), RS1011987781 (20:2462837 C>A), RS1013397407 (20:2464166 C>A,T), RS1014740447 (20:2464516 A>G), RS1016315363 (20:2463401 G>C), RS1016693454 (20:2463773 G>A), RS1017583164 (20:2463399 T>C), RS1018114912 (20:2463721 G>A)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 1 entry (VIP=true, CPIC=false)

CTD chemical–gene interactions

2 total (human), top 2 by PubMed support.

Chemical	Actions (top 5)	PubMed papers
bisphenol A	decreases methylation	1
Benzo(a)pyrene	affects methylation	1

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.