SNORD13

Summary

SNORD13 (small nucleolar RNA, C/D box 13, HGNC:32711) is a small nucleolar RNA gene on chromosome 8p12.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 692084 — RefSeq curated summary.

At a glance

• Gene type: non-coding (snoRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:32711
Approved symbol	SNORD13
Name	small nucleolar RNA, C/D box 13
Location	8p12
Locus type	RNA, small nucleolar
Status	Approved
Aliases	U13, RNU13, SNORD13A
Ensembl gene	ENSG00000239039
Ensembl biotype	snoRNA
OMIM	616664
Entrez	692084
RNAcentral	URS000064F355 — snoRNA, 104 nt, 2 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 snoRNA

ENST00000459299

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000459299 — 1 exons

Exon	Start	End
ENSE00001809307	33513475	33513578

Expression profiles

Bgee: expression breadth ubiquitous, 105 present calls, max score 99.84.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 6.8367 / max 143.5478, expressed in 1287 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
88395	6.8367	1287

Top tissues by expression

105 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
adrenal tissue	UBERON:0018303	99.84	gold quality
sural nerve	UBERON:0015488	99.66	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	89.16	gold quality
bone marrow	UBERON:0002371	88.21	gold quality
blood	UBERON:0000178	87.73	gold quality
granulocyte	CL:0000094	87.67	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	87.19	gold quality
lymph node	UBERON:0000029	85.16	gold quality
calcaneal tendon	UBERON:0003701	84.97	gold quality
monocyte	CL:0000576	83.91	gold quality
corpus callosum	UBERON:0002336	83.36	gold quality
liver	UBERON:0002107	81.63	gold quality
skeletal muscle tissue	UBERON:0001134	80.90	gold quality
kidney	UBERON:0002113	79.88	gold quality
stomach	UBERON:0000945	78.73	gold quality
adrenal gland	UBERON:0002369	77.65	gold quality
lung	UBERON:0002048	77.05	gold quality
duodenum	UBERON:0002114	76.72	gold quality
left uterine tube	UBERON:0001303	76.62	gold quality
rectum	UBERON:0001052	76.57	gold quality
muscle of leg	UBERON:0001383	76.17	gold quality
fallopian tube	UBERON:0003889	76.02	gold quality
adult mammalian kidney	UBERON:0000082	76.01	gold quality
gastrocnemius	UBERON:0001388	74.35	gold quality
vermiform appendix	UBERON:0001154	74.29	gold quality
endometrium	UBERON:0001295	73.35	gold quality
left adrenal gland cortex	UBERON:0035825	73.25	gold quality
placenta	UBERON:0001987	73.14	gold quality
right lobe of liver	UBERON:0001114	73.11	gold quality
intestine	UBERON:0000160	72.90	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Paralogs (34): (ENSG00000238295), SNORD13E (ENSG00000238311), (ENSG00000238316), (ENSG00000238326), (ENSG00000238371), (ENSG00000238372), (ENSG00000238387), (ENSG00000238440), (ENSG00000238485), SNORD13P1 (ENSG00000238498), (ENSG00000238570), (ENSG00000238594), (ENSG00000238628), (ENSG00000238645), (ENSG00000238694), (ENSG00000238724), (ENSG00000238745), (ENSG00000238761), (ENSG00000238764), (ENSG00000238804), (ENSG00000238901), (ENSG00000238902), (ENSG00000238906), SNORD13D (ENSG00000239035), (ENSG00000239041), (ENSG00000239079), (ENSG00000239080), (ENSG00000239093), (ENSG00000239096), SNORD13P3 (ENSG00000239128), (ENSG00000239129), (ENSG00000239137), (ENSG00000239153), (ENSG00000271922)

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.