SNORD13B-2

Summary

SNORD13B-2 (small nucleolar RNA, C/D box 13B-2, HGNC:52251) is a gene on chromosome 5q13.2.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 109617021 — RefSeq curated summary.

At a glance

• Clinical variants (ClinVar): 1 total

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52251
Approved symbol	SNORD13B-2
Name	small nucleolar RNA, C/D box 13B-2
Location	5q13.2
Locus type	RNA, small nucleolar
Status	Approved
Entrez	109617021
RNAcentral	URS00006CAD88 — snoRNA, 104 nt, 3 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

1 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	1

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1003029988 (5:71087346 C>T), RS1003913306 (5:71088757 T>G), RS1012047196 (5:71087245 T>C), RS1013175470 (5:71087398 G>A,C,T), RS1013560293 (5:71088674 G>A,C), RS1015352307 (5:71088789 C>T), RS1027036520 (5:71087493 G>A,C), RS1027260345 (5:71088693 C>T), RS1028546732 (5:71089165 T>A,C), RS1035900235 (5:71087354 C>G), RS1040967975 (5:71087103 G>A), RS1041770667 (5:71088345 T>C), RS1041802794 (5:71087246 C>A), RS1050818431 (5:71087140 G>A), RS1053723263 (5:71088141 GA>G)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.