SNORD13D

Summary

SNORD13D (small nucleolar RNA, C/D box 13D, HGNC:52253) is a small nucleolar RNA gene on chromosome 15q21.3.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 109616990 — RefSeq curated summary.

At a glance

• Gene type: non-coding (snoRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52253
Approved symbol	SNORD13D
Name	small nucleolar RNA, C/D box 13D
Location	15q21.3
Locus type	RNA, small nucleolar
Status	Approved
Ensembl gene	ENSG00000239035
Ensembl biotype	snoRNA
Entrez	109616990
RNAcentral	URS0000ABD8E4 — snoRNA, 91 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 snoRNA

ENST00000459428

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000459428 — 1 exons

Exon	Start	End
ENSE00001969804	57278570	57278673

Expression profiles

Bgee: expression breadth broad, 97 present calls, max score 83.85.

Top tissues by expression

97 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
calcaneal tendon	UBERON:0003701	83.85	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	83.51	gold quality
skeletal muscle tissue	UBERON:0001134	83.45	gold quality
corpus callosum	UBERON:0002336	82.03	gold quality
adrenal tissue	UBERON:0018303	81.17	gold quality
endometrium	UBERON:0001295	78.90	gold quality
prefrontal cortex	UBERON:0000451	78.39	gold quality
monocyte	CL:0000576	76.88	gold quality
left coronary artery	UBERON:0001626	76.60	gold quality
bone marrow	UBERON:0002371	75.97	gold quality
stomach	UBERON:0000945	75.69	gold quality
kidney	UBERON:0002113	75.22	gold quality
muscle of leg	UBERON:0001383	75.01	gold quality
right adrenal gland cortex	UBERON:0035827	73.20	gold quality
gastrocnemius	UBERON:0001388	73.19	gold quality
blood	UBERON:0000178	73.14	gold quality
ectocervix	UBERON:0012249	73.06	gold quality
adult mammalian kidney	UBERON:0000082	72.79	gold quality
body of pancreas	UBERON:0001150	72.77	gold quality
fundus of stomach	UBERON:0001160	72.69	gold quality
liver	UBERON:0002107	72.50	gold quality
heart	UBERON:0000948	72.38	gold quality
urinary bladder	UBERON:0001255	72.32	gold quality
right adrenal gland	UBERON:0001233	71.96	gold quality
body of stomach	UBERON:0001161	71.86	gold quality
islet of Langerhans	UBERON:0000006	71.81	gold quality
adrenal gland	UBERON:0002369	71.51	gold quality
right atrium auricular region	UBERON:0006631	71.47	gold quality
right lung	UBERON:0002167	71.41	gold quality
right lobe of liver	UBERON:0001114	71.20	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.44

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Paralogs (34): (ENSG00000238295), SNORD13E (ENSG00000238311), (ENSG00000238316), (ENSG00000238326), (ENSG00000238371), (ENSG00000238372), (ENSG00000238387), (ENSG00000238440), (ENSG00000238485), SNORD13P1 (ENSG00000238498), (ENSG00000238570), (ENSG00000238594), (ENSG00000238628), (ENSG00000238645), (ENSG00000238694), (ENSG00000238724), (ENSG00000238745), (ENSG00000238761), (ENSG00000238764), (ENSG00000238804), (ENSG00000238901), (ENSG00000238902), (ENSG00000238906), SNORD13 (ENSG00000239039), (ENSG00000239041), (ENSG00000239079), (ENSG00000239080), (ENSG00000239093), (ENSG00000239096), SNORD13P3 (ENSG00000239128), (ENSG00000239129), (ENSG00000239137), (ENSG00000239153), (ENSG00000271922)

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.