SNORD13E

Summary

SNORD13E (small nucleolar RNA, C/D box 13E, HGNC:52254) is a small nucleolar RNA gene on chromosome 15q22.31.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 109617020 — RefSeq curated summary.

At a glance

• Gene type: non-coding (snoRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52254
Approved symbol	SNORD13E
Name	small nucleolar RNA, C/D box 13E
Location	15q22.31
Locus type	RNA, small nucleolar
Status	Approved
Ensembl gene	ENSG00000238311
Ensembl biotype	snoRNA
Entrez	109617020
RNAcentral	URS00006BABCA — snoRNA, 104 nt, 2 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 snoRNA

ENST00000459325

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000459325 — 1 exons

Exon	Start	End
ENSE00001988054	65696833	65696936

Expression profiles

Bgee: expression breadth ubiquitous, 106 present calls, max score 92.32.

Top tissues by expression

106 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow	UBERON:0002371	92.32	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	88.69	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	85.65	gold quality
calcaneal tendon	UBERON:0003701	83.56	gold quality
adrenal tissue	UBERON:0018303	83.11	gold quality
liver	UBERON:0002107	82.42	gold quality
right coronary artery	UBERON:0001625	81.45	gold quality
blood	UBERON:0000178	81.29	gold quality
monocyte	CL:0000576	79.73	gold quality
placenta	UBERON:0001987	79.31	gold quality
mucosa of stomach	UBERON:0001199	77.20	gold quality
stomach	UBERON:0000945	76.90	gold quality
gastrocnemius	UBERON:0001388	76.76	gold quality
right adrenal gland cortex	UBERON:0035827	76.73	gold quality
endocervix	UBERON:0000458	76.57	gold quality
islet of Langerhans	UBERON:0000006	75.99	gold quality
vermiform appendix	UBERON:0001154	75.84	gold quality
right lung	UBERON:0002167	75.66	gold quality
lower esophagus mucosa	UBERON:0035834	75.54	gold quality
ectocervix	UBERON:0012249	75.36	gold quality
body of pancreas	UBERON:0001150	75.00	gold quality
right lobe of liver	UBERON:0001114	74.90	gold quality
subcutaneous adipose tissue	UBERON:0002190	74.90	gold quality
body of stomach	UBERON:0001161	74.85	gold quality
corpus callosum	UBERON:0002336	74.83	gold quality
adipose tissue	UBERON:0001013	74.58	gold quality
left ovary	UBERON:0002119	74.45	gold quality
endometrium	UBERON:0001295	74.41	gold quality
tibial artery	UBERON:0007610	74.32	gold quality
popliteal artery	UBERON:0002250	74.31	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.35

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Paralogs (34): (ENSG00000238295), (ENSG00000238316), (ENSG00000238326), (ENSG00000238371), (ENSG00000238372), (ENSG00000238387), (ENSG00000238440), (ENSG00000238485), SNORD13P1 (ENSG00000238498), (ENSG00000238570), (ENSG00000238594), (ENSG00000238628), (ENSG00000238645), (ENSG00000238694), (ENSG00000238724), (ENSG00000238745), (ENSG00000238761), (ENSG00000238764), (ENSG00000238804), (ENSG00000238901), (ENSG00000238902), (ENSG00000238906), SNORD13D (ENSG00000239035), SNORD13 (ENSG00000239039), (ENSG00000239041), (ENSG00000239079), (ENSG00000239080), (ENSG00000239093), (ENSG00000239096), SNORD13P3 (ENSG00000239128), (ENSG00000239129), (ENSG00000239137), (ENSG00000239153), (ENSG00000271922)

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.