SNORD38C

Summary

SNORD38C (small nucleolar RNA, C/D box 38C, HGNC:52227) is a small nucleolar RNA gene on chromosome 3p21.1.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 109617024 — RefSeq curated summary.

At a glance

• Gene type: non-coding (snoRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52227
Approved symbol	SNORD38C
Name	small nucleolar RNA, C/D box 38C
Location	3p21.1
Locus type	RNA, small nucleolar
Status	Approved
Ensembl gene	ENSG00000207109
Ensembl biotype	snoRNA
Entrez	109617024
RNAcentral	URS0000ABD8BE — snoRNA, 67 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 snoRNA

ENST00000384381

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000384381 — 1 exons

Exon	Start	End
ENSE00001808245	53333060	53333128

Expression profiles

Bgee: expression breadth broad, 62 present calls, max score 84.12.

Top tissues by expression

62 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
adrenal tissue	UBERON:0018303	84.12	gold quality
kidney	UBERON:0002113	83.68	gold quality
endometrium	UBERON:0001295	82.18	gold quality
adult mammalian kidney	UBERON:0000082	80.02	gold quality
calcaneal tendon	UBERON:0003701	79.35	gold quality
muscle of leg	UBERON:0001383	79.28	gold quality
monocyte	CL:0000576	79.03	gold quality
blood	UBERON:0000178	77.77	gold quality
lung	UBERON:0002048	75.24	gold quality
liver	UBERON:0002107	74.91	gold quality
stomach	UBERON:0000945	74.78	gold quality
gastrocnemius	UBERON:0001388	72.79	gold quality
lower esophagus mucosa	UBERON:0035834	72.49	gold quality
heart	UBERON:0000948	71.11	gold quality
minor salivary gland	UBERON:0001830	70.59	gold quality
amygdala	UBERON:0001876	70.11	gold quality
intestine	UBERON:0000160	68.14	gold quality
heart left ventricle	UBERON:0002084	67.99	gold quality
right lobe of liver	UBERON:0001114	67.84	gold quality
transverse colon	UBERON:0001157	67.13	gold quality
subcutaneous adipose tissue	UBERON:0002190	66.67	gold quality
esophagus mucosa	UBERON:0002469	66.61	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	66.24	gold quality
body of stomach	UBERON:0001161	65.91	gold quality
left coronary artery	UBERON:0001626	65.82	gold quality
lower esophagus muscularis layer	UBERON:0035833	65.76	gold quality
thoracic aorta	UBERON:0001515	65.51	gold quality
ectocervix	UBERON:0012249	65.44	gold quality
skin of leg	UBERON:0001511	65.43	gold quality
right lobe of thyroid gland	UBERON:0001119	65.41	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.75

Regulation

Is transcription factor: no

Cross-species orthologs

3 orthologs

Organism	Symbol	Gene ID
danio_rerio		ENSDARG00000106293
mus_musculus	Gm22980	ENSMUSG00000064542
rattus_norvegicus	Snord38b	ENSRNOG00000057993

Paralogs (5): (ENSG00000200733), SNORD38A (ENSG00000202031), SNORD38D (ENSG00000207199), (ENSG00000252408), SNORD38B (ENSG00000281859)

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.