SNORD38D

Summary

SNORD38D (small nucleolar RNA, C/D box 38D, HGNC:52228) is a small nucleolar RNA gene on chromosome 8p11.22.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 109616979 — RefSeq curated summary.

At a glance

• Gene type: non-coding (snoRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52228
Approved symbol	SNORD38D
Name	small nucleolar RNA, C/D box 38D
Location	8p11.22
Locus type	RNA, small nucleolar
Status	Approved
Ensembl gene	ENSG00000207199
Ensembl biotype	snoRNA
Entrez	109616979
RNAcentral	URS0000650962 — snoRNA, 69 nt, 7 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 snoRNA

ENST00000384470

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000384470 — 1 exons

Exon	Start	End
ENSE00001807442	39018615	39018683

Expression profiles

Bgee: expression breadth broad, 80 present calls, max score 93.78.

Top tissues by expression

80 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	93.78	gold quality
calcaneal tendon	UBERON:0003701	90.03	gold quality
bone marrow	UBERON:0002371	88.95	gold quality
adrenal tissue	UBERON:0018303	87.47	gold quality
corpus callosum	UBERON:0002336	85.05	gold quality
lymph node	UBERON:0000029	81.56	gold quality
kidney	UBERON:0002113	80.86	gold quality
placenta	UBERON:0001987	79.26	gold quality
adult mammalian kidney	UBERON:0000082	78.27	gold quality
blood	UBERON:0000178	77.28	gold quality
stomach	UBERON:0000945	77.03	gold quality
monocyte	CL:0000576	76.53	gold quality
liver	UBERON:0002107	76.06	gold quality
endometrium	UBERON:0001295	75.68	gold quality
gastrocnemius	UBERON:0001388	73.45	gold quality
heart	UBERON:0000948	71.70	gold quality
lung	UBERON:0002048	71.53	gold quality
right lobe of liver	UBERON:0001114	71.21	gold quality
body of stomach	UBERON:0001161	70.40	gold quality
islet of Langerhans	UBERON:0000006	70.33	gold quality
heart left ventricle	UBERON:0002084	70.11	gold quality
colon	UBERON:0001155	69.91	gold quality
intestine	UBERON:0000160	69.64	gold quality
urinary bladder	UBERON:0001255	69.50	gold quality
subcutaneous adipose tissue	UBERON:0002190	69.07	gold quality
tibial artery	UBERON:0007610	68.89	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	68.49	gold quality
transverse colon	UBERON:0001157	68.46	gold quality
right atrium auricular region	UBERON:0006631	68.38	gold quality
adipose tissue	UBERON:0001013	68.23	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.33

Regulation

Is transcription factor: no

Cross-species orthologs

3 orthologs

Organism	Symbol	Gene ID
danio_rerio		ENSDARG00000106293
mus_musculus	Gm22980	ENSMUSG00000064542
rattus_norvegicus	Snord38b	ENSRNOG00000057993

Paralogs (5): (ENSG00000200733), SNORD38A (ENSG00000202031), SNORD38C (ENSG00000207109), (ENSG00000252408), SNORD38B (ENSG00000281859)

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.