SNORD54

Summary

SNORD54 (small nucleolar RNA, C/D box 54, HGNC:10204) is a small nucleolar RNA gene on chromosome 8q12.1.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 26795 — RefSeq curated summary.

At a glance

• Gene type: non-coding (snoRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:10204
Approved symbol	SNORD54
Name	small nucleolar RNA, C/D box 54
Location	8q12.1
Locus type	RNA, small nucleolar
Status	Approved
Aliases	U54
Ensembl gene	ENSG00000238650
Ensembl biotype	snoRNA
Entrez	26795
RNAcentral	URS000004A26B — snoRNA, 63 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 snoRNA

ENST00000459159

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000459159 — 1 exons

Exon	Start	End
ENSE00001807995	56073835	56073901

Expression profiles

Bgee: expression breadth broad, 12 present calls, max score 98.85.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.2495 / max 108.5483, expressed in 78 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
93130	0.2495	78

Top tissues by expression

12 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	98.85	gold quality
adrenal tissue	UBERON:0018303	87.07	gold quality
skeletal muscle tissue	UBERON:0001134	85.72	gold quality
heart	UBERON:0000948	85.00	gold quality
lung	UBERON:0002048	84.07	gold quality
liver	UBERON:0002107	83.88	gold quality
muscle of leg	UBERON:0001383	80.36	gold quality
blood	UBERON:0000178	76.38	gold quality
gastrocnemius	UBERON:0001388	74.09	gold quality
stomach	UBERON:0000945	73.09	gold quality
intestine	UBERON:0000160	69.98	gold quality
Ammon’s horn	UBERON:0001954	65.06	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

3 orthologs

Organism	Symbol	Gene ID
danio_rerio	SNORD54	ENSDARG00000083158
mus_musculus	Gm24016	ENSMUSG00000088351
rattus_norvegicus	Snord54	ENSRNOG00000059478

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.