SNORD58A

Summary

SNORD58A (small nucleolar RNA, C/D box 58A, HGNC:10208) is a small nucleolar RNA gene on chromosome 18q21.1.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 26791 — RefSeq curated summary.

At a glance

• Gene type: non-coding (snoRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:10208
Approved symbol	SNORD58A
Name	small nucleolar RNA, C/D box 58A
Location	18q21.1
Locus type	RNA, small nucleolar
Status	Approved
Aliases	U58a
Ensembl gene	ENSG00000206602
Ensembl biotype	snoRNA
Entrez	26791
RNAcentral	URS000005BADB — snoRNA, 65 nt, 7 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 snoRNA

ENST00000383875

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000383875 — 1 exons

Exon	Start	End
ENSE00001498885	49491283	49491347

Expression profiles

Bgee: expression breadth broad, 19 present calls, max score 99.58.

FANTOM5 (CAGE): breadth broad, TPM avg 0.4553 / max 19.3754, expressed in 225 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
171912	0.4553	225

Top tissues by expression

19 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	99.58	gold quality
lung	UBERON:0002048	87.43	gold quality
liver	UBERON:0002107	86.78	gold quality
Brodmann (1909) area 9	UBERON:0013540	83.99	gold quality
colon	UBERON:0001155	81.43	gold quality
adrenal tissue	UBERON:0018303	80.95	gold quality
duodenum	UBERON:0002114	79.66	gold quality
stomach	UBERON:0000945	77.40	gold quality
intestine	UBERON:0000160	76.97	gold quality
adult mammalian kidney	UBERON:0000082	76.54	gold quality
blood	UBERON:0000178	74.26	gold quality
right frontal lobe	UBERON:0002810	71.52	gold quality
calcaneal tendon	UBERON:0003701	66.12	gold quality
gastrocnemius	UBERON:0001388	65.27	gold quality
caudate nucleus	UBERON:0001873	63.79	gold quality
heart	UBERON:0000948	61.43	gold quality
anterior cingulate cortex	UBERON:0009835	58.88	gold quality
Ammon’s horn	UBERON:0001954	55.45	gold quality
putamen	UBERON:0001874	53.79	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

2 orthologs

Organism	Symbol	Gene ID
mus_musculus	Gm23301	ENSMUSG00000064647
rattus_norvegicus	LOC120098352	ENSRNOG00000059171

Paralogs (3): SNORD58C (ENSG00000202093), SNORD58 (ENSG00000212615), SNORD58B (ENSG00000271982)

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.