SNORD65C

Summary

SNORD65C (small nucleolar RNA, C/D box 65C, HGNC:52232) is a small nucleolar RNA gene on chromosome 7p15.3.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 109616981 — RefSeq curated summary.

At a glance

• Gene type: non-coding (snoRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52232
Approved symbol	SNORD65C
Name	small nucleolar RNA, C/D box 65C
Location	7p15.3
Locus type	RNA, small nucleolar
Status	Approved
Ensembl gene	ENSG00000212264
Ensembl biotype	snoRNA
Entrez	109616981
RNAcentral	URS000071087B — snoRNA, 71 nt, 6 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 snoRNA

ENST00000390962

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000390962 — 1 exons

Exon	Start	End
ENSE00001508746	23396446	23396516

Expression profiles

Bgee: expression breadth broad, 27 present calls, max score 96.31.

Top tissues by expression

27 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
kidney	UBERON:0002113	96.31	gold quality
stomach	UBERON:0000945	90.87	gold quality
lung	UBERON:0002048	90.40	gold quality
adrenal tissue	UBERON:0018303	85.59	gold quality
heart	UBERON:0000948	84.53	gold quality
intestine	UBERON:0000160	84.26	gold quality
tibial nerve	UBERON:0001323	82.97	gold quality
liver	UBERON:0002107	77.00	gold quality
placenta	UBERON:0001987	75.82	gold quality
gastrocnemius	UBERON:0001388	71.48	gold quality
colon	UBERON:0001155	67.78	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	67.10	gold quality
esophagus mucosa	UBERON:0002469	65.80	gold quality
lower esophagus muscularis layer	UBERON:0035833	65.58	gold quality
omental fat pad	UBERON:0010414	64.26	gold quality
left adrenal gland cortex	UBERON:0035825	64.11	gold quality
subcutaneous adipose tissue	UBERON:0002190	63.85	gold quality
skin of leg	UBERON:0001511	63.71	gold quality
ascending aorta	UBERON:0001496	62.73	gold quality
hypothalamus	UBERON:0001898	61.95	gold quality
putamen	UBERON:0001874	61.91	gold quality
muscle layer of sigmoid colon	UBERON:0035805	59.14	gold quality
vagina	UBERON:0000996	57.94	gold quality
right frontal lobe	UBERON:0002810	56.92	gold quality
testis	UBERON:0000473	46.66	gold quality
right testis	UBERON:0004534	45.53	gold quality
left testis	UBERON:0004533	45.17	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.33

Regulation

Is transcription factor: no

Cross-species orthologs

3 orthologs

Organism	Symbol	Gene ID
danio_rerio		ENSDARG00000080188
danio_rerio		ENSDARG00000080775
rattus_norvegicus	LOC120099030	ENSRNOG00000061849

Paralogs (4): (ENSG00000212191), (ENSG00000212229), SNORD65B (ENSG00000238936), SNORD65 (ENSG00000277512)

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.