SNORD88C

Summary

SNORD88C (small nucleolar RNA, C/D box 88C, HGNC:32749) is a small nucleolar RNA gene on chromosome 19q13.33.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 692204 — RefSeq curated summary.

At a glance

• Gene type: non-coding (snoRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:32749
Approved symbol	SNORD88C
Name	small nucleolar RNA, C/D box 88C
Location	19q13.33
Locus type	RNA, small nucleolar
Status	Approved
Aliases	HBII-180C
Ensembl gene	ENSG00000220988
Ensembl biotype	snoRNA
Entrez	692204
RNAcentral	URS000075A57C — snoRNA, 97 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 snoRNA

ENST00000408061

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000408061 — 1 exons

Exon	Start	End
ENSE00001807465	50802328	50802418

Expression profiles

Bgee: expression breadth broad, 60 present calls, max score 98.49.

Top tissues by expression

60 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	98.49	gold quality
liver	UBERON:0002107	88.13	gold quality
adrenal tissue	UBERON:0018303	84.64	gold quality
blood	UBERON:0000178	82.96	gold quality
Brodmann (1909) area 9	UBERON:0013540	79.98	gold quality
heart	UBERON:0000948	78.14	gold quality
monocyte	CL:0000576	76.37	gold quality
right lobe of thyroid gland	UBERON:0001119	76.17	gold quality
skeletal muscle tissue	UBERON:0001134	76.02	gold quality
muscle of leg	UBERON:0001383	75.33	gold quality
stomach	UBERON:0000945	74.85	gold quality
lung	UBERON:0002048	74.80	gold quality
adult mammalian kidney	UBERON:0000082	73.73	gold quality
gastrocnemius	UBERON:0001388	72.85	gold quality
right atrium auricular region	UBERON:0006631	70.61	gold quality
tibial nerve	UBERON:0001323	70.60	gold quality
calcaneal tendon	UBERON:0003701	70.33	gold quality
thoracic mammary gland	UBERON:0005200	70.25	gold quality
body of pancreas	UBERON:0001150	69.95	gold quality
body of stomach	UBERON:0001161	68.84	gold quality
muscle layer of sigmoid colon	UBERON:0035805	68.61	gold quality
kidney	UBERON:0002113	67.91	gold quality
ascending aorta	UBERON:0001496	67.48	gold quality
heart left ventricle	UBERON:0002084	66.05	gold quality
tibial artery	UBERON:0007610	65.91	gold quality
putamen	UBERON:0001874	65.23	gold quality
Ammon’s horn	UBERON:0001954	65.17	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	64.35	gold quality
subcutaneous adipose tissue	UBERON:0002190	63.88	gold quality
caudate nucleus	UBERON:0001873	63.41	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

2 orthologs

Organism	Symbol	Gene ID
mus_musculus	Gm26247	ENSMUSG00000080352
rattus_norvegicus	Snord88c	ENSRNOG00000057316

Paralogs (3): SNORD88A (ENSG00000221241), SNORD88B (ENSG00000221381), (ENSG00000221611)

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.