SNORD96A

Summary

SNORD96A (small nucleolar RNA, C/D box 96A, HGNC:32758) is a small nucleolar RNA gene on chromosome 5q35.3.

Predicted to be involved in RNA processing. Predicted to be located in nucleolus.

Source: NCBI Gene 619571 — RefSeq curated summary.

At a glance

• Gene type: non-coding (snoRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:32758
Approved symbol	SNORD96A
Name	small nucleolar RNA, C/D box 96A
Location	5q35.3
Locus type	RNA, small nucleolar
Status	Approved
Aliases	U96a
Ensembl gene	ENSG00000272296
Ensembl biotype	snoRNA
Entrez	619571
RNAcentral	URS00002C37BE — snoRNA, 72 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 snoRNA

ENST00000606577

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000606577 — 1 exons

Exon	Start	End
ENSE00003696022	181241814	181241892

Expression profiles

Bgee: expression breadth broad, 12 present calls, max score 96.84.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.2151 / max 27.0833, expressed in 66 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
65365	0.2151	66

Top tissues by expression

12 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	96.84	gold quality
liver	UBERON:0002107	88.70	gold quality
stomach	UBERON:0000945	85.52	gold quality
Brodmann (1909) area 9	UBERON:0013540	83.32	gold quality
lung	UBERON:0002048	82.41	gold quality
heart	UBERON:0000948	77.88	gold quality
adult mammalian kidney	UBERON:0000082	77.75	gold quality
blood	UBERON:0000178	75.27	gold quality
endometrium	UBERON:0001295	72.62	gold quality
colon	UBERON:0001155	71.73	gold quality
calcaneal tendon	UBERON:0003701	52.82	silver quality
right hemisphere of cerebellum	UBERON:0014890	36.43	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

2 orthologs

Organism	Symbol	Gene ID
mus_musculus	Snord96a	ENSMUSG00000064725
rattus_norvegicus	Snord96a	ENSRNOG00000060502

Paralogs (1): SNORD96B (ENSG00000208883)

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.