SNX29-AS1

Summary

SNX29-AS1 (SNX29 antisense RNA 1, HGNC:58483) is a long non-coding RNA gene on chromosome 16p13.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58483
Approved symbol	SNX29-AS1
Name	SNX29 antisense RNA 1
Location	16p13.13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260488
Ensembl biotype	lncRNA
Entrez	141974273

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000570197

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000570197 — 2 exons

Exon	Start	End
ENSE00002605719	11976851	11977036
ENSE00002625747	11977436	11977850

Expression profiles

Bgee: expression breadth ubiquitous, 112 present calls, max score 75.67.

Top tissues by expression

112 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
colonic epithelium	UBERON:0000397	75.67	gold quality
sural nerve	UBERON:0015488	74.84	gold quality
bone marrow cell	CL:0002092	65.98	silver quality
endometrium	UBERON:0001295	61.87	gold quality
calcaneal tendon	UBERON:0003701	61.71	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.74	gold quality
cortex of kidney	UBERON:0001225	59.50	gold quality
kidney	UBERON:0002113	58.23	gold quality
bone marrow	UBERON:0002371	57.86	gold quality
adult mammalian kidney	UBERON:0000082	57.77	gold quality
skeletal muscle tissue	UBERON:0001134	57.23	gold quality
blood	UBERON:0000178	55.31	gold quality
gall bladder	UBERON:0002110	54.41	gold quality
stromal cell of endometrium	CL:0002255	53.98	silver quality
lymph node	UBERON:0000029	53.66	gold quality
granulocyte	CL:0000094	52.71	gold quality
liver	UBERON:0002107	52.52	gold quality
islet of Langerhans	UBERON:0000006	52.18	gold quality
monocyte	CL:0000576	52.15	silver quality
subcutaneous adipose tissue	UBERON:0002190	51.84	gold quality
muscle of leg	UBERON:0001383	51.40	gold quality
prefrontal cortex	UBERON:0000451	50.98	gold quality
vermiform appendix	UBERON:0001154	50.53	gold quality
right adrenal gland cortex	UBERON:0035827	50.46	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	49.97	gold quality
primary visual cortex	UBERON:0002436	49.88	silver quality
gastrocnemius	UBERON:0001388	49.71	gold quality
thoracic mammary gland	UBERON:0005200	49.52	gold quality
adipose tissue	UBERON:0001013	49.49	gold quality
tonsil	UBERON:0002372	49.22	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.85

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.