SNX29-AS3

Summary

SNX29-AS3 (SNX29 antisense RNA 3, HGNC:58619) is a long non-coding RNA gene on chromosome 16p13.12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58619
Approved symbol	SNX29-AS3
Name	SNX29 antisense RNA 3
Location	16p13.12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259899
Ensembl biotype	lncRNA
Entrez	105371085

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000564505

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000564505 — 2 exons

Exon	Start	End
ENSE00004078106	12560751	12561146
ENSE00004078107	12610738	12611083

Expression profiles

Bgee: expression breadth ubiquitous, 111 present calls, max score 96.38.

Top tissues by expression

111 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	96.38	gold quality
bone marrow cell	CL:0002092	71.54	silver quality
bone marrow	UBERON:0002371	61.80	gold quality
stromal cell of endometrium	CL:0002255	57.75	gold quality
cortex of kidney	UBERON:0001225	56.64	gold quality
sural nerve	UBERON:0015488	56.58	silver quality
monocyte	CL:0000576	56.13	gold quality
calcaneal tendon	UBERON:0003701	54.62	gold quality
placenta	UBERON:0001987	54.01	gold quality
metanephros cortex	UBERON:0010533	53.46	gold quality
tonsil	UBERON:0002372	53.17	silver quality
lymph node	UBERON:0000029	53.12	gold quality
uterine cervix	UBERON:0000002	53.11	gold quality
islet of Langerhans	UBERON:0000006	52.94	gold quality
kidney	UBERON:0002113	52.58	gold quality
corpus callosum	UBERON:0002336	52.22	silver quality
superior frontal gyrus	UBERON:0002661	52.09	gold quality
blood	UBERON:0000178	51.77	silver quality
vermiform appendix	UBERON:0001154	51.04	gold quality
adult mammalian kidney	UBERON:0000082	50.15	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	50.12	gold quality
ectocervix	UBERON:0012249	49.36	gold quality
gall bladder	UBERON:0002110	49.01	gold quality
endometrium	UBERON:0001295	48.92	gold quality
muscle of leg	UBERON:0001383	48.47	silver quality
prefrontal cortex	UBERON:0000451	48.41	gold quality
urinary bladder	UBERON:0001255	48.34	gold quality
left uterine tube	UBERON:0001303	48.16	gold quality
left coronary artery	UBERON:0001626	47.73	gold quality
gastrocnemius	UBERON:0001388	47.71	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.48

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.