SPNS2-AS1

Summary

SPNS2-AS1 (SPNS2 antisense RNA 1, HGNC:55787) is a long non-coding RNA gene on chromosome 17p13.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55787
Approved symbol	SPNS2-AS1
Name	SPNS2 antisense RNA 1
Location	17p13.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229782
Ensembl biotype	lncRNA
Entrez	107985053
RNAcentral	URS0002A261F7 — lncRNA, 1972 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000416958, ENST00000809720, ENST00000809721, ENST00000809722, ENST00000809723, ENST00000809724, ENST00000809725

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000416958 — 2 exons

Exon	Start	End
ENSE00004205812	4499627	4499913
ENSE00004205814	4496031	4497715

Expression profiles

Bgee: expression breadth ubiquitous, 119 present calls, max score 71.00.

Top tissues by expression

119 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
metanephros cortex	UBERON:0010533	71.00	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	70.34	gold quality
primary visual cortex	UBERON:0002436	69.17	gold quality
lower esophagus mucosa	UBERON:0035834	69.09	gold quality
right frontal lobe	UBERON:0002810	68.88	gold quality
cortex of kidney	UBERON:0001225	68.51	gold quality
kidney	UBERON:0002113	68.05	gold quality
adult mammalian kidney	UBERON:0000082	67.57	gold quality
right lobe of liver	UBERON:0001114	67.52	gold quality
Brodmann (1909) area 9	UBERON:0013540	67.38	gold quality
skeletal muscle tissue	UBERON:0001134	67.13	gold quality
gall bladder	UBERON:0002110	67.07	gold quality
frontal cortex	UBERON:0001870	66.91	gold quality
liver	UBERON:0002107	66.89	gold quality
putamen	UBERON:0001874	66.66	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	66.28	gold quality
hindlimb stylopod muscle	UBERON:0004252	66.12	gold quality
nucleus accumbens	UBERON:0001882	65.73	gold quality
prefrontal cortex	UBERON:0000451	65.66	gold quality
cerebral cortex	UBERON:0000956	65.49	gold quality
smooth muscle tissue	UBERON:0001135	65.48	gold quality
caudate nucleus	UBERON:0001873	65.25	gold quality
superior frontal gyrus	UBERON:0002661	65.09	gold quality
ectocervix	UBERON:0012249	64.98	gold quality
anterior cingulate cortex	UBERON:0009835	64.41	gold quality
lymph node	UBERON:0000029	64.14	gold quality
placenta	UBERON:0001987	64.05	gold quality
bone marrow	UBERON:0002371	62.24	gold quality
spleen	UBERON:0002106	62.14	gold quality
subcutaneous adipose tissue	UBERON:0002190	61.87	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.48

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.