SRCAP-AS1

Summary

SRCAP-AS1 (SRCAP antisense RNA 1, HGNC:55348) is a long non-coding RNA gene on chromosome 16p11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55348
Approved symbol	SRCAP-AS1
Name	SRCAP antisense RNA 1
Location	16p11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261840
Ensembl biotype	lncRNA
Entrez	730183

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000564775, ENST00000568500, ENST00000662983, ENST00000686453, ENST00000784532, ENST00000784533, ENST00000784534, ENST00000784535

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000564775 — 2 exons

Exon	Start	End
ENSE00003984988	30697704	30697931
ENSE00004159363	30698881	30699060

Expression profiles

Bgee: expression breadth ubiquitous, 134 present calls, max score 95.54.

Top tissues by expression

134 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	95.54	gold quality
right testis	UBERON:0004534	95.22	gold quality
testis	UBERON:0000473	94.59	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.05	gold quality
pituitary gland	UBERON:0000007	84.93	gold quality
adenohypophysis	UBERON:0002196	84.53	gold quality
right uterine tube	UBERON:0001302	82.18	gold quality
right hemisphere of cerebellum	UBERON:0014890	82.06	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	81.73	gold quality
cerebellar hemisphere	UBERON:0002245	81.38	gold quality
cerebellar cortex	UBERON:0002129	81.29	gold quality
cerebellum	UBERON:0002037	81.22	gold quality
substantia nigra	UBERON:0002038	80.85	gold quality
amygdala	UBERON:0001876	80.54	gold quality
temporal lobe	UBERON:0001871	80.52	gold quality
putamen	UBERON:0001874	80.46	gold quality
left lobe of thyroid gland	UBERON:0001120	80.45	gold quality
thyroid gland	UBERON:0002046	80.14	gold quality
right lobe of thyroid gland	UBERON:0001119	79.62	gold quality
Ammon’s horn	UBERON:0001954	79.27	gold quality
gastrocnemius	UBERON:0001388	79.24	gold quality
caudate nucleus	UBERON:0001873	79.08	gold quality
muscle of leg	UBERON:0001383	78.84	gold quality
primary visual cortex	UBERON:0002436	78.81	gold quality
endocervix	UBERON:0000458	78.61	gold quality
tibial nerve	UBERON:0001323	78.52	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	78.49	gold quality
brain	UBERON:0000955	78.49	gold quality
left ovary	UBERON:0002119	78.36	gold quality
hypothalamus	UBERON:0001898	78.32	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.20

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.