SRGAP2-AS1

Summary

SRGAP2-AS1 (SRGAP2 antisense RNA 1, HGNC:40902) is a long non-coding RNA gene on chromosome 1p11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40902
Approved symbol	SRGAP2-AS1
Name	SRGAP2 antisense RNA 1
Location	1p11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000230806
Ensembl biotype	lncRNA
Entrez	100873165
RNAcentral	URS000057041D — lncRNA, 2504 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000429055, ENST00000437515, ENST00000757288

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000429055 — 3 exons

Exon	Start	End
ENSE00001609800	121397478	121397666
ENSE00001615356	121397763	121397839
ENSE00001679596	121398665	121398806

Expression profiles

Bgee: expression breadth broad, 100 present calls, max score 75.75.

Top tissues by expression

100 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	75.75	gold quality
sural nerve	UBERON:0015488	75.34	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	73.67	gold quality
cortical plate	UBERON:0005343	71.06	gold quality
ganglionic eminence	UBERON:0004023	68.07	gold quality
urinary bladder	UBERON:0001255	64.87	silver quality
bone marrow cell	CL:0002092	62.71	silver quality
uterine cervix	UBERON:0000002	62.52	silver quality
skeletal muscle tissue	UBERON:0001134	60.21	silver quality
primary visual cortex	UBERON:0002436	58.33	gold quality
cortex of kidney	UBERON:0001225	58.02	gold quality
liver	UBERON:0002107	56.43	silver quality
calcaneal tendon	UBERON:0003701	55.91	gold quality
lung	UBERON:0002048	55.46	silver quality
placenta	UBERON:0001987	55.38	gold quality
gall bladder	UBERON:0002110	55.15	gold quality
adrenal gland	UBERON:0002369	54.45	gold quality
testis	UBERON:0000473	54.10	gold quality
monocyte	CL:0000576	53.18	gold quality
blood	UBERON:0000178	53.16	silver quality
prefrontal cortex	UBERON:0000451	53.13	gold quality
hindlimb stylopod muscle	UBERON:0004252	52.79	silver quality
kidney	UBERON:0002113	52.75	silver quality
right lobe of liver	UBERON:0001114	52.57	gold quality
gastrocnemius	UBERON:0001388	52.31	gold quality
tonsil	UBERON:0002372	52.28	silver quality
corpus callosum	UBERON:0002336	51.94	gold quality
myometrium	UBERON:0001296	51.67	silver quality
superior frontal gyrus	UBERON:0002661	51.28	gold quality
amygdala	UBERON:0001876	50.95	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.48

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.