SRGAP3-AS1

Summary

SRGAP3-AS1 (SRGAP3 antisense RNA 1, HGNC:40898) is a long non-coding RNA gene on chromosome 3p25.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40898
Approved symbol	SRGAP3-AS1
Name	SRGAP3 antisense RNA 1
Location	3p25.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224808
Ensembl biotype	lncRNA
Entrez	100874103
RNAcentral	URS0002A1D9E4 — lncRNA, 583 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000414633, ENST00000817609

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000414633 — 2 exons

Exon	Start	End
ENSE00004221367	9015721	9015979
ENSE00004221370	9014075	9014291

Expression profiles

Bgee: expression breadth broad, 80 present calls, max score 76.75.

Top tissues by expression

80 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	76.75	gold quality
colonic epithelium	UBERON:0000397	71.14	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	66.58	gold quality
tonsil	UBERON:0002372	65.39	gold quality
primary visual cortex	UBERON:0002436	55.57	gold quality
prefrontal cortex	UBERON:0000451	54.88	gold quality
blood	UBERON:0000178	54.58	gold quality
superior frontal gyrus	UBERON:0002661	54.57	gold quality
calcaneal tendon	UBERON:0003701	54.28	silver quality
monocyte	CL:0000576	53.14	gold quality
body of pancreas	UBERON:0001150	53.05	gold quality
endometrium	UBERON:0001295	52.56	silver quality
corpus callosum	UBERON:0002336	52.00	gold quality
thoracic mammary gland	UBERON:0005200	49.39	silver quality
left adrenal gland cortex	UBERON:0035825	48.28	gold quality
heart left ventricle	UBERON:0002084	47.76	gold quality
right uterine tube	UBERON:0001302	47.74	gold quality
kidney	UBERON:0002113	47.45	silver quality
thyroid gland	UBERON:0002046	47.15	gold quality
left uterine tube	UBERON:0001303	47.11	gold quality
gastrocnemius	UBERON:0001388	46.50	silver quality
tibial artery	UBERON:0007610	45.78	gold quality
cerebellum	UBERON:0002037	45.73	silver quality
cerebellar cortex	UBERON:0002129	45.63	silver quality
substantia nigra	UBERON:0002038	45.58	gold quality
intestine	UBERON:0000160	45.57	silver quality
cerebellar hemisphere	UBERON:0002245	45.50	silver quality
left lobe of thyroid gland	UBERON:0001120	45.25	gold quality
heart	UBERON:0000948	45.22	silver quality
lower esophagus mucosa	UBERON:0035834	45.20	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.82

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.