SRGAP3-AS3

Summary

SRGAP3-AS3 (SRGAP3 antisense RNA 3, HGNC:40900) is a long non-coding RNA gene on chromosome 3p25.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40900
Approved symbol	SRGAP3-AS3
Name	SRGAP3 antisense RNA 3
Location	3p25.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000227929
Ensembl biotype	lncRNA
Entrez	100288831
RNAcentral	URS000075D7AD — lncRNA, 1223 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000432981

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000432981 — 5 exons

Exon	Start	End
ENSE00001593155	9217362	9217476
ENSE00001671648	9217731	9218553
ENSE00001789205	9216895	9216989
ENSE00003790046	9219467	9219508
ENSE00003790915	9219209	9219356

Expression profiles

Bgee: expression breadth broad, 56 present calls, max score 85.58.

Top tissues by expression

56 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.58	silver quality
uterine cervix	UBERON:0000002	75.43	gold quality
bone marrow cell	CL:0002092	65.34	silver quality
right testis	UBERON:0004534	61.86	gold quality
left testis	UBERON:0004533	60.07	gold quality
ovary	UBERON:0000992	59.96	silver quality
testis	UBERON:0000473	59.50	gold quality
tonsil	UBERON:0002372	58.13	silver quality
prostate gland	UBERON:0002367	53.25	silver quality
thyroid gland	UBERON:0002046	53.19	gold quality
multicellular organism	UBERON:0000468	52.75	gold quality
monocyte	CL:0000576	52.72	silver quality
primary visual cortex	UBERON:0002436	52.48	gold quality
blood	UBERON:0000178	51.86	silver quality
adrenal gland	UBERON:0002369	51.29	silver quality
kidney	UBERON:0002113	50.58	silver quality
adult mammalian kidney	UBERON:0000082	49.60	gold quality
intestine	UBERON:0000160	49.48	gold quality
lung	UBERON:0002048	49.20	gold quality
superior frontal gyrus	UBERON:0002661	48.89	gold quality
caudate nucleus	UBERON:0001873	48.82	gold quality
calcaneal tendon	UBERON:0003701	48.52	silver quality
colon	UBERON:0001155	48.25	gold quality
prefrontal cortex	UBERON:0000451	47.82	silver quality
stomach	UBERON:0000945	47.40	silver quality
esophagus	UBERON:0001043	46.88	silver quality
adrenal tissue	UBERON:0018303	46.57	silver quality
cerebellum	UBERON:0002037	46.38	silver quality
corpus callosum	UBERON:0002336	46.33	silver quality
cerebellar cortex	UBERON:0002129	46.12	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.