SRPK2-AS1

Summary

SRPK2-AS1 (SRPK2 antisense RNA 1, HGNC:40565) is a long non-coding RNA gene on chromosome 7q22.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40565
Approved symbol	SRPK2-AS1
Name	SRPK2 antisense RNA 1
Location	7q22.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000242154
Ensembl biotype	lncRNA
Entrez	141725175

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000476569

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000476569 — 2 exons

Exon	Start	End
ENSE00001872610	105306252	105306642
ENSE00001880791	105304277	105304431

Expression profiles

Bgee: expression breadth ubiquitous, 127 present calls, max score 86.75.

Top tissues by expression

127 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.75	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	75.98	gold quality
bone marrow cell	CL:0002092	75.21	gold quality
colonic epithelium	UBERON:0000397	73.71	gold quality
bone marrow	UBERON:0002371	73.08	gold quality
skeletal muscle tissue	UBERON:0001134	71.19	gold quality
corpus callosum	UBERON:0002336	67.56	gold quality
blood	UBERON:0000178	67.31	gold quality
adrenal tissue	UBERON:0018303	67.27	gold quality
cortical plate	UBERON:0005343	66.49	gold quality
monocyte	CL:0000576	65.40	gold quality
leukocyte	CL:0000738	65.33	gold quality
hindlimb stylopod muscle	UBERON:0004252	64.76	gold quality
sural nerve	UBERON:0015488	63.17	silver quality
islet of Langerhans	UBERON:0000006	61.91	gold quality
calcaneal tendon	UBERON:0003701	61.86	gold quality
prefrontal cortex	UBERON:0000451	59.61	gold quality
granulocyte	CL:0000094	58.80	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	58.57	gold quality
endometrium	UBERON:0001295	58.21	gold quality
tonsil	UBERON:0002372	58.15	gold quality
muscle of leg	UBERON:0001383	58.04	gold quality
primary visual cortex	UBERON:0002436	58.02	gold quality
liver	UBERON:0002107	57.86	gold quality
gastrocnemius	UBERON:0001388	57.79	gold quality
mucosa of transverse colon	UBERON:0004991	57.53	gold quality
gall bladder	UBERON:0002110	57.39	gold quality
kidney	UBERON:0002113	56.92	gold quality
lymph node	UBERON:0000029	56.45	gold quality
urinary bladder	UBERON:0001255	56.26	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.