SSH2-AS1

Summary

SSH2-AS1 (SSH2 antisense RNA 1, HGNC:58555) is a long non-coding RNA gene on chromosome 17q11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58555
Approved symbol	SSH2-AS1
Name	SSH2 antisense RNA 1
Location	17q11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000263370
Ensembl biotype	lncRNA
Entrez	107984990

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000581240, ENST00000776414

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000581240 — 2 exons

Exon	Start	End
ENSE00002721272	29639627	29639731
ENSE00002727973	29640661	29640825

Expression profiles

Bgee: expression breadth ubiquitous, 123 present calls, max score 92.64.

Top tissues by expression

123 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.64	gold quality
hindlimb stylopod muscle	UBERON:0004252	90.55	gold quality
muscle of leg	UBERON:0001383	84.45	gold quality
corpus callosum	UBERON:0002336	84.41	gold quality
gastrocnemius	UBERON:0001388	83.62	gold quality
sural nerve	UBERON:0015488	83.51	gold quality
skeletal muscle tissue	UBERON:0001134	83.28	gold quality
colonic epithelium	UBERON:0000397	80.48	gold quality
monocyte	CL:0000576	78.44	gold quality
blood	UBERON:0000178	77.85	gold quality
ganglionic eminence	UBERON:0004023	75.49	gold quality
apex of heart	UBERON:0002098	74.94	gold quality
bone marrow cell	CL:0002092	73.95	silver quality
bone marrow	UBERON:0002371	70.22	gold quality
lymph node	UBERON:0000029	68.29	gold quality
calcaneal tendon	UBERON:0003701	67.53	gold quality
heart left ventricle	UBERON:0002084	66.17	gold quality
prefrontal cortex	UBERON:0000451	66.12	gold quality
vermiform appendix	UBERON:0001154	64.64	gold quality
subcutaneous adipose tissue	UBERON:0002190	64.58	gold quality
superior frontal gyrus	UBERON:0002661	64.14	gold quality
heart	UBERON:0000948	64.13	gold quality
primary visual cortex	UBERON:0002436	63.66	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	63.29	gold quality
placenta	UBERON:0001987	63.15	gold quality
duodenum	UBERON:0002114	63.06	gold quality
right lung	UBERON:0002167	62.59	gold quality
islet of Langerhans	UBERON:0000006	62.24	gold quality
adipose tissue	UBERON:0001013	62.15	gold quality
gall bladder	UBERON:0002110	62.13	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.04

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.