ST3GAL1-DT

Summary

ST3GAL1-DT (ST3GAL1 divergent transcript, HGNC:55372) is a long non-coding RNA gene on chromosome 8q24.22.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55372
Approved symbol	ST3GAL1-DT
Name	ST3GAL1 divergent transcript
Location	8q24.22
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261220
Ensembl biotype	lncRNA
Entrez	119545630
RNAcentral	URS00026A232F — lncRNA, 3285 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000561761, ENST00000749562, ENST00000749563, ENST00000749564, ENST00000749565

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000561761 — 1 exons

Exon	Start	End
ENSE00004093336	133572138	133573861

Expression profiles

Bgee: expression breadth ubiquitous, 171 present calls, max score 88.43.

Top tissues by expression

244 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
kidney epithelium	UBERON:0004819	88.43	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.05	silver quality
cardiac muscle of right atrium	UBERON:0003379	82.97	gold quality
left ventricle myocardium	UBERON:0006566	82.80	gold quality
monocyte	CL:0000576	81.34	gold quality
leukocyte	CL:0000738	80.53	gold quality
apex of heart	UBERON:0002098	80.08	gold quality
upper arm skin	UBERON:0004263	79.83	gold quality
epithelial cell of pancreas	CL:0000083	77.91	gold quality
colonic epithelium	UBERON:0000397	77.52	gold quality
right uterine tube	UBERON:0001302	76.39	gold quality
right coronary artery	UBERON:0001625	76.37	gold quality
right lobe of thyroid gland	UBERON:0001119	76.14	gold quality
anterior cingulate cortex	UBERON:0009835	75.79	gold quality
spleen	UBERON:0002106	75.74	gold quality
gastrocnemius	UBERON:0001388	75.65	gold quality
left lobe of thyroid gland	UBERON:0001120	75.60	gold quality
descending thoracic aorta	UBERON:0002345	75.52	gold quality
hindlimb stylopod muscle	UBERON:0004252	75.39	gold quality
right hemisphere of cerebellum	UBERON:0014890	75.21	gold quality
cerebellar hemisphere	UBERON:0002245	75.09	gold quality
left coronary artery	UBERON:0001626	74.99	gold quality
ascending aorta	UBERON:0001496	74.88	gold quality
muscle of leg	UBERON:0001383	74.85	gold quality
cerebellar cortex	UBERON:0002129	74.77	gold quality
thoracic aorta	UBERON:0001515	74.75	gold quality
heart left ventricle	UBERON:0002084	74.69	gold quality
thyroid gland	UBERON:0002046	74.49	gold quality
right frontal lobe	UBERON:0002810	74.37	gold quality
cortical plate	UBERON:0005343	74.17	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.58

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.