ST3GAL3-AS1

Summary

ST3GAL3-AS1 (ST3GAL3 antisense RNA 1, HGNC:40529) is a long non-coding RNA gene on chromosome 1p34.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40529
Approved symbol	ST3GAL3-AS1
Name	ST3GAL3 antisense RNA 1
Location	1p34.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229444
Ensembl biotype	lncRNA
Entrez	101929592
RNAcentral	URS00005C9EA5 — lncRNA, 469 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000437753, ENST00000794685, ENST00000794690, ENST00000794691

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000437753 — 4 exons

Exon	Start	End
ENSE00001605748	43720471	43720551
ENSE00001652001	43709392	43709535
ENSE00001683972	43727233	43727343
ENSE00001703141	43718994	43719126

Expression profiles

Bgee: expression breadth ubiquitous, 147 present calls, max score 97.67.

Top tissues by expression

238 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
gastrocnemius	UBERON:0001388	97.67	gold quality
hindlimb stylopod muscle	UBERON:0004252	97.60	gold quality
muscle of leg	UBERON:0001383	97.26	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	96.57	gold quality
skeletal muscle tissue	UBERON:0001134	89.81	gold quality
vastus lateralis	UBERON:0001379	89.18	silver quality
quadriceps femoris	UBERON:0001377	88.92	silver quality
muscle tissue	UBERON:0002385	86.82	gold quality
tibialis anterior	UBERON:0001385	84.16	silver quality
deltoid	UBERON:0001476	83.56	silver quality
biceps brachii	UBERON:0001507	82.56	silver quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.57	gold quality
buccal mucosa cell	CL:0002336	76.85	silver quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	75.83	silver quality
sural nerve	UBERON:0015488	72.41	gold quality
cardiac muscle of right atrium	UBERON:0003379	68.65	gold quality
left ventricle myocardium	UBERON:0006566	64.83	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	64.21	gold quality
pigmented layer of retina	UBERON:0001782	63.58	gold quality
adrenal tissue	UBERON:0018303	63.51	gold quality
endothelial cell	CL:0000115	62.07	gold quality
gall bladder	UBERON:0002110	61.62	gold quality
pancreatic ductal cell	CL:0002079	59.95	silver quality
smooth muscle tissue	UBERON:0001135	59.47	gold quality
ileal mucosa	UBERON:0000331	58.52	silver quality
calcaneal tendon	UBERON:0003701	58.07	gold quality
myocardium	UBERON:0002349	57.47	gold quality
lower lobe of lung	UBERON:0008949	56.85	silver quality
oocyte	CL:0000023	56.79	gold quality
epithelial cell of pancreas	CL:0000083	56.37	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.57

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.