ST3GAL5-AS1

Summary

ST3GAL5-AS1 (ST3GAL5 antisense RNA 1, HGNC:51129) is a long non-coding RNA gene on chromosome 2p11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51129
Approved symbol	ST3GAL5-AS1
Name	ST3GAL5 antisense RNA 1
Location	2p11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232504
Ensembl biotype	lncRNA
Entrez	101928113
RNAcentral	URS000075B96E — lncRNA, 1116 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000455121, ENST00000608140, ENST00000665352, ENST00000718698, ENST00000718699

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000455121 — 2 exons

Exon	Start	End
ENSE00001658850	85889280	85889803
ENSE00002147410	85890722	85890980

Expression profiles

Bgee: expression breadth ubiquitous, 124 present calls, max score 87.79.

FANTOM5 (CAGE): breadth broad, TPM avg 1.0809 / max 108.5483, expressed in 299 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
21278	0.7774	200
21277	0.2181	105
21279	0.0853	47

Top tissues by expression

124 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
corpus callosum	UBERON:0002336	87.79	gold quality
thyroid gland	UBERON:0002046	72.30	gold quality
right lobe of thyroid gland	UBERON:0001119	72.13	gold quality
left lobe of thyroid gland	UBERON:0001120	72.09	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	70.25	gold quality
monocyte	CL:0000576	70.02	gold quality
leukocyte	CL:0000738	69.41	gold quality
sural nerve	UBERON:0015488	67.43	silver quality
right adrenal gland cortex	UBERON:0035827	65.99	gold quality
right adrenal gland	UBERON:0001233	65.97	gold quality
bone marrow cell	CL:0002092	65.84	silver quality
left adrenal gland	UBERON:0001234	64.89	gold quality
islet of Langerhans	UBERON:0000006	64.86	gold quality
adrenal gland	UBERON:0002369	64.66	gold quality
prefrontal cortex	UBERON:0000451	64.53	gold quality
calcaneal tendon	UBERON:0003701	64.42	gold quality
left adrenal gland cortex	UBERON:0035825	64.34	gold quality
urinary bladder	UBERON:0001255	63.82	gold quality
substantia nigra	UBERON:0002038	63.82	gold quality
ganglionic eminence	UBERON:0004023	63.70	gold quality
skeletal muscle tissue	UBERON:0001134	62.82	gold quality
ventricular zone	UBERON:0003053	62.75	gold quality
granulocyte	CL:0000094	62.65	gold quality
Ammon’s horn	UBERON:0001954	61.82	gold quality
putamen	UBERON:0001874	60.89	gold quality
lymph node	UBERON:0000029	60.33	gold quality
primary visual cortex	UBERON:0002436	60.29	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.13	gold quality
frontal cortex	UBERON:0001870	60.01	gold quality
amygdala	UBERON:0001876	59.65	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.99

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.