STAG2-AS1

Summary

STAG2-AS1 (STAG2 antisense RNA 1, HGNC:55727) is a long non-coding RNA gene on chromosome Xq25.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55727
Approved symbol	STAG2-AS1
Name	STAG2 antisense RNA 1
Location	Xq25
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232412
Ensembl biotype	lncRNA
Entrez	101928402
RNAcentral	URS0000812202 — lncRNA, 340 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000426367, ENST00000771111, ENST00000771112, ENST00000771113

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000426367 — 2 exons

Exon	Start	End
ENSE00004133784	123961189	123961639
ENSE00004133785	123959228	123959405

Expression profiles

Bgee: expression breadth ubiquitous, 128 present calls, max score 90.02.

Top tissues by expression

128 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	90.02	gold quality
bone marrow cell	CL:0002092	78.48	gold quality
ventricular zone	UBERON:0003053	75.68	gold quality
bone marrow	UBERON:0002371	74.06	gold quality
ganglionic eminence	UBERON:0004023	72.53	gold quality
skeletal muscle tissue	UBERON:0001134	71.60	gold quality
hindlimb stylopod muscle	UBERON:0004252	71.59	gold quality
muscle tissue	UBERON:0002385	71.57	gold quality
right uterine tube	UBERON:0001302	71.49	gold quality
pituitary gland	UBERON:0000007	71.43	gold quality
adenohypophysis	UBERON:0002196	71.07	gold quality
right lobe of thyroid gland	UBERON:0001119	70.58	gold quality
thyroid gland	UBERON:0002046	70.53	gold quality
nucleus accumbens	UBERON:0001882	70.45	gold quality
left lobe of thyroid gland	UBERON:0001120	70.42	gold quality
putamen	UBERON:0001874	70.35	gold quality
amygdala	UBERON:0001876	70.11	gold quality
apex of heart	UBERON:0002098	70.07	gold quality
monocyte	CL:0000576	69.63	gold quality
caudate nucleus	UBERON:0001873	69.36	gold quality
granulocyte	CL:0000094	69.14	gold quality
prefrontal cortex	UBERON:0000451	68.99	gold quality
Ammon’s horn	UBERON:0001954	68.55	gold quality
tonsil	UBERON:0002372	68.41	gold quality
prostate gland	UBERON:0002367	68.01	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	67.99	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	67.99	gold quality
substantia nigra	UBERON:0002038	67.84	gold quality
muscle of leg	UBERON:0001383	67.77	gold quality
brain	UBERON:0000955	67.73	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.33

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.