STIM2-AS1

Summary

STIM2-AS1 (STIM2 antisense RNA 1, HGNC:40879) is a long non-coding RNA gene on chromosome 4p15.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40879
Approved symbol	STIM2-AS1
Name	STIM2 antisense RNA 1
Location	4p15.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000240005
Ensembl biotype	lncRNA
Entrez	105374546
RNAcentral	URS0000A777FE — lncRNA, 673 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000467484, ENST00000472346, ENST00000489096, ENST00000663047, ENST00000667363, ENST00000808207, ENST00000808208

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000467484 — 2 exons

Exon	Start	End
ENSE00001938336	26859806	26860028
ENSE00001944018	26860341	26860599

Expression profiles

Bgee: expression breadth ubiquitous, 130 present calls, max score 93.96.

FANTOM5 (CAGE): breadth broad, TPM avg 0.6724 / max 53.2280, expressed in 354 samples.

FANTOM5 promoters (4 alternative TSS)

Promoter ID	TPM avg	Samples expressed
51720	0.4116	196
51722	0.2307	75
51723	0.0175	5
51721	0.0125	3

Top tissues by expression

133 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	93.96	gold quality
left testis	UBERON:0004533	92.62	gold quality
testis	UBERON:0000473	92.28	gold quality
right testis	UBERON:0004534	91.66	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	86.92	gold quality
thymus	UBERON:0002370	82.33	silver quality
quadriceps femoris	UBERON:0001377	80.40	gold quality
bone marrow cell	CL:0002092	76.78	gold quality
monocyte	CL:0000576	75.55	gold quality
bone marrow	UBERON:0002371	74.44	gold quality
mucosa of transverse colon	UBERON:0004991	74.36	gold quality
granulocyte	CL:0000094	74.29	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	73.88	gold quality
ganglionic eminence	UBERON:0004023	73.77	gold quality
islet of Langerhans	UBERON:0000006	73.54	gold quality
pancreas	UBERON:0001264	72.91	gold quality
body of pancreas	UBERON:0001150	72.07	gold quality
liver	UBERON:0002107	71.95	gold quality
skeletal muscle tissue	UBERON:0001134	71.90	gold quality
right adrenal gland	UBERON:0001233	71.32	gold quality
hindlimb stylopod muscle	UBERON:0004252	71.27	gold quality
nucleus accumbens	UBERON:0001882	70.79	gold quality
prefrontal cortex	UBERON:0000451	70.34	gold quality
adult mammalian kidney	UBERON:0000082	70.30	gold quality
kidney	UBERON:0002113	70.23	gold quality
substantia nigra	UBERON:0002038	70.22	gold quality
right lobe of liver	UBERON:0001114	70.06	gold quality
superior frontal gyrus	UBERON:0002661	69.89	gold quality
tonsil	UBERON:0002372	69.64	gold quality
temporal lobe	UBERON:0001871	69.52	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.65

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.