STK4
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Also known as MST1KRS2YSK3
Summary
STK4 (serine/threonine kinase 4, HGNC:11408) is a protein-coding gene on chromosome 20q13.12, encoding Serine/threonine-protein kinase 4 (Q13043). Stress-activated, pro-apoptotic kinase which, following caspase-cleavage, enters the nucleus and induces chromatin condensation followed by internucleosomal DNA fragmentation.
The protein encoded by this gene is a cytoplasmic kinase that is structurally similar to the yeast Ste20p kinase, which acts upstream of the stress-induced mitogen-activated protein kinase cascade. The encoded protein can phosphorylate myelin basic protein and undergoes autophosphorylation. A caspase-cleaved fragment of the encoded protein has been shown to be capable of phosphorylating histone H2B. The particular phosphorylation catalyzed by this protein has been correlated with apoptosis, and it’s possible that this protein induces the chromatin condensation observed in this process.
Source: NCBI Gene 6789 — RefSeq curated summary.
At a glance
- Gene–disease (curated): combined immunodeficiency due to STK4 deficiency (Definitive, ClinGen)
- GWAS associations: 7
- Clinical variants (ClinVar): 310 total — 15 pathogenic, 5 likely-pathogenic
- Phenotypes (HPO): 84
- Druggable target: yes — 38 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_006282
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:11408 |
| Approved symbol | STK4 |
| Name | serine/threonine kinase 4 |
| Location | 20q13.12 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | MST1, KRS2, YSK3 |
| Ensembl gene | ENSG00000101109 |
| Ensembl biotype | protein_coding |
| OMIM | 604965 |
| Entrez | 6789 |
Gene structure
Transcript identifiers
Ensembl transcripts: 18 — 7 nonsense_mediated_decay, 5 protein_coding, 4 protein_coding_CDS_not_defined, 2 retained_intron
ENST00000372801, ENST00000372806, ENST00000474717, ENST00000487587, ENST00000488618, ENST00000499879, ENST00000698218, ENST00000698219, ENST00000698220, ENST00000698221, ENST00000698222, ENST00000698223, ENST00000698224, ENST00000698225, ENST00000698226, ENST00000698227, ENST00000698228, ENST00000925605
RefSeq mRNA: 2 — MANE Select: NM_006282
NM_001352385, NM_006282
CCDS: CCDS13341, CCDS86957
Canonical transcript exons
ENST00000372806 — 11 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000662330 | 44997169 | 44997306 |
| ENSE00000662331 | 45000392 | 45000520 |
| ENSE00000662332 | 45001167 | 45001353 |
| ENSE00000662333 | 45024973 | 45025130 |
| ENSE00001458697 | 45075018 | 45080021 |
| ENSE00003498696 | 44978443 | 44978571 |
| ENSE00003528774 | 44972078 | 44972158 |
| ENSE00003741458 | 44981829 | 44981943 |
| ENSE00003751036 | 44987132 | 44987296 |
| ENSE00003789167 | 44995090 | 44995257 |
| ENSE00003973020 | 44966512 | 44966603 |
Expression profiles
Bgee: expression breadth ubiquitous, 267 present calls, max score 95.67.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 27.2779 / max 1320.2105, expressed in 1767 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 184766 | 27.0464 | 1767 |
| 184767 | 0.2315 | 80 |
Top tissues by expression
291 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| colonic epithelium | UBERON:0000397 | 95.67 | gold quality |
| buccal mucosa cell | CL:0002336 | 95.64 | gold quality |
| blood | UBERON:0000178 | 95.49 | gold quality |
| monocyte | CL:0000576 | 95.14 | gold quality |
| leukocyte | CL:0000738 | 94.56 | gold quality |
| mononuclear cell | CL:0000842 | 94.50 | gold quality |
| superficial temporal artery | UBERON:0001614 | 94.35 | gold quality |
| trabecular bone tissue | UBERON:0002483 | 94.12 | gold quality |
| pylorus | UBERON:0001166 | 93.71 | gold quality |
| tonsil | UBERON:0002372 | 93.38 | gold quality |
| lymph node | UBERON:0000029 | 93.13 | gold quality |
| saphenous vein | UBERON:0007318 | 92.94 | gold quality |
| cardia of stomach | UBERON:0001162 | 92.90 | gold quality |
| medial globus pallidus | UBERON:0002477 | 92.53 | gold quality |
| lower lobe of lung | UBERON:0008949 | 92.31 | gold quality |
| bone marrow | UBERON:0002371 | 92.28 | gold quality |
| superior surface of tongue | UBERON:0007371 | 92.17 | gold quality |
| nipple | UBERON:0002030 | 92.03 | gold quality |
| globus pallidus | UBERON:0001875 | 91.56 | gold quality |
| trigeminal ganglion | UBERON:0001675 | 91.37 | gold quality |
| granulocyte | CL:0000094 | 91.20 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 91.15 | gold quality |
| inferior vagus X ganglion | UBERON:0005363 | 91.10 | gold quality |
| superior vestibular nucleus | UBERON:0007227 | 90.62 | gold quality |
| mammary duct | UBERON:0001765 | 90.32 | gold quality |
| ventral tegmental area | UBERON:0002691 | 90.10 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 90.04 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 89.77 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 89.76 | gold quality |
| adrenal tissue | UBERON:0018303 | 89.70 | gold quality |
Single-cell (SCXA)
Detected in 14 experiment(s), a significant marker in 12.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-9841 | yes | 583.93 |
| E-GEOD-135922 | yes | 456.70 |
| E-MTAB-10885 | yes | 390.20 |
| E-MTAB-8142 | yes | 104.63 |
| E-CURD-46 | yes | 43.17 |
| E-MTAB-10287 | yes | 34.62 |
| E-HCAD-1 | yes | 30.01 |
| E-CURD-122 | yes | 24.28 |
| E-HCAD-10 | yes | 20.90 |
| E-MTAB-8498 | yes | 8.75 |
| E-CURD-119 | yes | 4.23 |
| E-CURD-97 | no | 1956.21 |
| E-HCAD-8 | no | 390.42 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
259 targeting STK4, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-4682 | 100.00 | 68.89 | 1258 |
| HSA-MIR-200B-3P | 100.00 | 73.31 | 2693 |
| HSA-MIR-200C-3P | 100.00 | 73.35 | 2685 |
| HSA-MIR-429 | 100.00 | 73.44 | 2698 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-8485 | 100.00 | 77.57 | 4731 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-196A-1-3P | 99.99 | 72.15 | 2772 |
| HSA-MIR-186-5P | 99.99 | 70.83 | 3707 |
| HSA-MIR-3185 | 99.99 | 68.12 | 1959 |
| HSA-MIR-548P | 99.98 | 72.25 | 3784 |
| HSA-MIR-4803 | 99.98 | 71.99 | 3117 |
| HSA-MIR-373-5P | 99.98 | 75.36 | 4753 |
| HSA-MIR-616-5P | 99.98 | 75.58 | 4775 |
| HSA-MIR-520D-5P | 99.98 | 73.34 | 4883 |
| HSA-MIR-524-5P | 99.98 | 73.43 | 4882 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-MIR-6888-3P | 99.97 | 65.95 | 1170 |
| HSA-MIR-3148 | 99.97 | 75.06 | 6478 |
| HSA-MIR-548AN | 99.97 | 70.91 | 2817 |
| HSA-MIR-5688 | 99.96 | 73.23 | 4504 |
| HSA-MIR-4267 | 99.96 | 66.53 | 2368 |
| HSA-MIR-495-3P | 99.96 | 72.81 | 4197 |
| HSA-MIR-493-5P | 99.96 | 72.47 | 2382 |
| HSA-MIR-9-3P | 99.96 | 70.88 | 2068 |
| HSA-MIR-548AJ-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-548X-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-570-3P | 99.96 | 72.41 | 4910 |
Literature-anchored findings (GeneRIF, showing 40)
- Caspase-catalyzed cleavage and activation of Mst1 correlates with eosinophil but not neutrophil apoptosis. (PMID:11964314)
- promotion of MST1-induced apoptosis by DAP4 by enabling colocalization of MST with p53 (PMID:12384512)
- Mammalian Sterile20-like kinase 1 has a role in the regulation of apoptosis [review] (PMID:15157167)
- our results suggest that alteration of the Sav-RASSF1-Hpo tumor suppressor pathway may occur through hypermethylation of the CpG island promoter of MST1, MST2 and/or RASSF1A in human sarcomas (PMID:17538946)
- Akt blocks MstI-triggered FOXO3 nuclear translocation by phosphorylating MstI, promoting cell survival. (PMID:17726016)
- Mst1 and its caspase cleavage products are direct inhibitors of Akt (PMID:17932490)
- Studies provide new insights into how MST1 substrate selectivity is modulated with implications for understanding apoptotic signaling through MST1 kinase. (PMID:18510339)
- Mst1 is a novel mediator of cardiac troponin I phosphorylation in the heart and may contribute to the modulation of myofilament function under a variety of physiological and pathophysiological conditions (PMID:18986304)
- findings identify NDR1/2 as novel proapoptotic kinases and key members of the RASSF1A/MST1 signaling cascade (PMID:19062280)
- hWW45 is required to enhance MST1-mediated apoptosis in vivo and thus is a critical player in an MST1-driven cell death signaling pathway. (PMID:19212654)
- MST1-FOXO1 signaling is an important link survival factor deprivation-induced neuronal cell death (PMID:19221179)
- Data suggest thta MST kinases 1/2 serve to monitor cytoskeletal integrity and couple the JNK1/SAPK1 pathway to the regulation of the cell cycle regulatory protein p21Waf1. (PMID:19822666)
- MST1 and hMOB1 signaling controls centrosome duplication. (PMID:19836237)
- hSav1 is a newly identified protein that interacts with Mst1 and augments Mst1-mediated apoptosis. (PMID:19950692)
- tolerance to increased levels of intracellular ROS provided by the Mst1-FoxOs signaling pathway is crucial for the maintenance of naive T cell homeostasis in the periphery (PMID:19956688)
- these findings indicate that MST1 is a major determinant of RASSF2 protein stability, and suggest that RASSF2 acts in a complex manner that extends beyond simple protein-protein association to play an important role in MST1 regulation. (PMID:19962960)
- MST1 directly phosphorylated Aurora B and inhibited its kinase activity in vitro; depletion of Aurora B restored the stability of kinetochore-microtubule attachment in cells depleted of MST1 or NDR1. (PMID:20171103)
- The identified Mst1 as a binding partner that interacts with PHLPPs both in vivo and in vitro. PHLPPs dephosphorylate Mst1 on the T387 inhibitory site, which activate Mst1 and its downstream effectors p38 and JNK to induce apoptosis. (PMID:20513427)
- H2AX is a substrate of MST1, which functions to induce apoptotic chromatin condensation and DNA fragmentation (PMID:20921231)
- Through binding to MST1/2, RASSF1A supports maintenance of MST1/2 phosphorylation, promoting an active state of the MST kinases and favoring induction of apoptosis. (PMID:21199877)
- novel regulatory mechanism involving the phosphorylation of Sirt1 by MST1 kinase which leads to p53 activation, with implications for our understanding of signaling mechanisms during DNA damage-induced apoptosis (PMID:21212262)
- Phage microarrays containing colorectal cancer cDNA libraries were prepared to identify phage-expressed peptides recognized by tumor-specific autoantibodies from patient sera. (PMID:21228115)
- MST1 was also found in androgen receptor (AR)-chromatin complexes, and enforced expression of MST1 reduced the binding of AR to a well-characterized, androgen-responsive region within the prostate-specific antigen promo (PMID:21512132)
- results show a novel PRX-I function to cause cell death in response to high levels of oxidative stress by activating MST1, which underlies the p53-dependent cytotoxicity caused by anticancer agents (PMID:21516123)
- Findings show a biological role for MICAL-1 in apoptosis and define a novel negative regulatory mechanism of MST-NDR signaling. (PMID:21730291)
- Data indicate that dimerization domain of MST1 is unstructured as monomer and undergoes dimerization-induced folding. Data indicate that inhibitory domain of MST1 is disordered region both as single domain and as construct with dimerization domain. (PMID:22112013)
- MST1 mutations in autosomal recessive primary immunodeficiency characterized by defective naive T-cell survival. (PMID:22174160)
- STK4 deficiency is a novel human primary immunodeficiency syndrome. (PMID:22294732)
- Data suggest that phosphoinositide-3-kinase/Akt and mammalian target of rapamycin (mTOR) pathway signaling differentially regulate phospho-Mst1-Thr-120/Thr-183. (PMID:22619175)
- Low expression of MST1 may be related with the pathogenesis and prognosis of acute leukemia. (PMID:22739148)
- Mst1 exhibits a growth promoting activity in HCC cells upon NORE1B downregulation. (PMID:23347832)
- Mst1 inactivates Prdx1 by phosphorylating it at Thr-90 and Thr-183, leading to accumulation of hydrogen peroxide in cells. (PMID:23386615)
- Results indicated that Mst1 might be a promising anticancer target. (PMID:23419720)
- In a yeast two-hybrid screen of a heart cDNA library with Mst1 as bait, glyceraldehyde-3-phosphate dehydrogenase (GAPDH) was identified as an Mst1-interacting protein. (PMID:23527007)
- Inhibition of Mst1 kinase activation in cardiomyocytes protects against cell hypoxia. (PMID:23647599)
- MST1 plays a tumor suppressive role and is a prognostic factor in human breast cancer. (PMID:23737290)
- Phosphorylated by the MST1. (PMID:23893242)
- results suggest that Mst1 coordinately regulates autophagy and apoptosis by phosphorylating Beclin1 and consequently modulating a three-way interaction among Bcl-2 proteins, Beclin1 and Bax (PMID:24141421)
- Results indicate that changes in phosphorylation orchestrate interactions between kinases and phosphatases in Hippo (MST1/2 protein kinases) signaling, providing a putative mechanism for pathway regulation. (PMID:24255178)
- PHLPP1 is a binding protein for Mst1 and it modulates the Hippo pathway by dephosphorylating Mst1 at the inhibitory Thr(387) of Mst1. (PMID:24393845)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Stk4 | ENSMUSG00000018209 |
| rattus_norvegicus | Stk4 | ENSRNOG00000013529 |
Paralogs (35): MAP3K14 (ENSG00000006062), MAP4K3 (ENSG00000011566), MAP4K5 (ENSG00000012983), MAP2K3 (ENSG00000034152), SLK (ENSG00000065613), MAP4K4 (ENSG00000071054), STK10 (ENSG00000072786), PAK3 (ENSG00000077264), STRADB (ENSG00000082146), MAP3K1 (ENSG00000095015), PAK5 (ENSG00000101349), STK24 (ENSG00000102572), STK3 (ENSG00000104375), MAP4K1 (ENSG00000104814), MAP3K8 (ENSG00000107968), MAP2K6 (ENSG00000108984), NEK4 (ENSG00000114904), STK25 (ENSG00000115694), NRK (ENSG00000123572), PAK4 (ENSG00000130669), STK26 (ENSG00000134602), TAOK3 (ENSG00000135090), PAK6 (ENSG00000137843), MINK1 (ENSG00000141503), PAK1 (ENSG00000149269), TAOK2 (ENSG00000149930), TNIK (ENSG00000154310), TAOK1 (ENSG00000160551), MAP4K2 (ENSG00000168067), OXSR1 (ENSG00000172939), MAP3K19 (ENSG00000176601), PAK2 (ENSG00000180370), SBK2 (ENSG00000187550), STK39 (ENSG00000198648), STRADA (ENSG00000266173)
Protein
Protein identifiers
Serine/threonine-protein kinase 4 — Q13043 (reviewed: Q13043)
Alternative names: Mammalian STE20-like protein kinase 1, STE20-like kinase MST1, Serine/threonine-protein kinase Krs-2
All UniProt accessions (10): Q13043, A0A087WVN8, A0A087WYT4, A0A8V8TLH7, A0A8V8TLK1, A0A8V8TM13, A0A8V8TM18, A0A8V8TN08, A0A8V8TNA0, F5H5B4
UniProt curated annotations — full annotation on UniProt →
Function. Stress-activated, pro-apoptotic kinase which, following caspase-cleavage, enters the nucleus and induces chromatin condensation followed by internucleosomal DNA fragmentation. Key component of the Hippo signaling pathway which plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein STK3/MST2 and STK4/MST1, in complex with its regulatory protein SAV1, phosphorylates and activates LATS1/2 in complex with its regulatory protein MOB1, which in turn phosphorylates and inactivates YAP1 oncoprotein and WWTR1/TAZ. Phosphorylation of YAP1 by LATS2 inhibits its translocation into the nucleus to regulate cellular genes important for cell proliferation, cell death, and cell migration. STK3/MST2 and STK4/MST1 are required to repress proliferation of mature hepatocytes, to prevent activation of facultative adult liver stem cells (oval cells), and to inhibit tumor formation. Phosphorylates ‘Ser-14’ of histone H2B (H2BS14ph) during apoptosis. Phosphorylates FOXO3 upon oxidative stress, which results in its nuclear translocation and cell death initiation. Phosphorylates MOBKL1A, MOBKL1B and RASSF2. Phosphorylates TNNI3 (cardiac Tn-I) and alters its binding affinity to TNNC1 (cardiac Tn-C) and TNNT2 (cardiac Tn-T). Phosphorylates FOXO1 on ‘Ser-212’ and regulates its activation and stimulates transcription of PMAIP1 in a FOXO1-dependent manner. Phosphorylates SIRT1 and inhibits SIRT1-mediated p53/TP53 deacetylation, thereby promoting p53/TP53 dependent transcription and apoptosis upon DNA damage. Acts as an inhibitor of PKB/AKT1. Phosphorylates AR on ‘Ser-650’ and suppresses its activity by intersecting with PKB/AKT1 signaling and antagonizing formation of AR-chromatin complexes.
Subunit / interactions. Homodimer; mediated via the coiled-coil region. Interacts with NORE1, which inhibits autoactivation. Interacts with and stabilizes SAV1. Interacts with RASSF1. Interacts with FOXO3. Interacts with RASSF2 (via SARAH domain). Interacts with AR, PKB/AKT1, TNNI3 and SIRT1. Interacts with DLG5 (via PDZ domain 3). Interacts with MARK3 in the presence of DLG5. Interacts with SCRIB in the presence of DLG5.
Subcellular location. Cytoplasm. Nucleus.
Tissue specificity. Expressed in prostate cancer and levels increase from the normal to the malignant state (at protein level). Ubiquitously expressed.
Post-translational modifications. Autophosphorylated on serine and threonine residues. Phosphorylation at Thr-387 by PKB/AKT1, leads to inhibition of its: kinase activity, nuclear translocation and autophosphorylation at Thr-183. It also diminishes its cleavage by caspases and its ability to phosphorylate FOXO3. Proteolytically cleaved by caspase-3 during apoptosis at Asp-326 and Asp-349 resulting in a 37 kDa or a 39 kDa subunit respectively. The 39 kDa subunit is further cleaved into the 37 kDa form. Proteolytic cleavage results in kinase activation and nuclear translocation of the truncated form (MST1/N). It is less likely that cleavage at Asp-349 is a prerequisite for activation as this site is not conserved in the murine ortholog.
Disease relevance. Immunodeficiency 110 with lymphoproliferation (IMD110) [MIM:614868] An autosomal recessive, primary T-cell immunodeficiency syndrome characterized by progressive loss of naive T-cells, recurrent bacterial, viral, and fungal infections, warts, and abscesses, autoimmune manifestations, and cardiac malformations, including atrial septal defect. Patients are at risk for developing lymphoproliferative disorders or lymphoma. The disease is caused by variants affecting the gene represented in this entry.
Activity regulation. Inhibited by the C-terminal non-catalytic region. Activated by caspase-cleavage. Full activation also requires homodimerization and autophosphorylation of Thr-183. Activated by RASSF1 which acts by preventing its dephosphorylation.
Induction. Activity increases during mitosis.
Similarity. Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q13043-1 | 1 | yes |
| Q13043-2 | 2 |
RefSeq proteins (2): NP_001339314, NP_006273* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000719 | Prot_kinase_dom | Domain |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR011524 | SARAH_dom | Domain |
| IPR017441 | Protein_kinase_ATP_BS | Binding_site |
| IPR024205 | Mst1_2_SARAH_domain | Domain |
| IPR036674 | p53_tetramer_sf | Homologous_superfamily |
| IPR050629 | STE20/SPS1-PAK | Family |
Pfam: PF00069, PF11629
Enzyme classification (BRENDA):
- EC 2.7.11.1 — non-specific serine/threonine protein kinase (BRENDA: 71 organisms, 682 substrates, 228 inhibitors, 23 Km, 6 kcat entries)
Substrate kinetics (BRENDA)
8 substrates with measured Km, best-characterized 8. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| ATP | 0.0007–0.64 | 11 |
| KKRAARATSNVFA | 0.013–0.045 | 3 |
| PAH1 PHOSPHATIDATE PHOSPHATASE | 0.0002 | 2 |
| RRRLSSLRA | 0.0036–0.0037 | 2 |
| GTP | 0.46 | 1 |
| KKRAARASSNVFA | 0.02 | 1 |
| LYS-LYS-PHE-ASN-ARG-THR-LEU-SER-VAL-ALA | 0.0093 | 1 |
| MYELIN BASIC PROTEIN | 0.145 | 1 |
Catalyzed reactions (Rhea), 2 shown:
- L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+) (RHEA:17989)
- L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+) (RHEA:46608)
UniProt features (71 total): helix 18, modified residue 11, strand 9, mutagenesis site 7, sequence variant 5, turn 4, chain 3, binding site 2, site 2, splice variant 2, domain 2, compositionally biased region 2, sequence conflict 1, region of interest 1, coiled-coil region 1, active site 1
Structure
Experimental structures (PDB)
16 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 8PAV | X-RAY DIFFRACTION | 1.9 |
| 4NR2 | X-RAY DIFFRACTION | 2 |
| 8A5J | X-RAY DIFFRACTION | 2.12 |
| 8PAW | X-RAY DIFFRACTION | 2.14 |
| 3COM | X-RAY DIFFRACTION | 2.2 |
| 4OH8 | X-RAY DIFFRACTION | 2.28 |
| 5TWG | X-RAY DIFFRACTION | 2.3 |
| 9VX3 | X-RAY DIFFRACTION | 2.39 |
| 5TWH | X-RAY DIFFRACTION | 2.5 |
| 7CEA | X-RAY DIFFRACTION | 2.55 |
| 6YAT | X-RAY DIFFRACTION | 2.58 |
| 9IIC | X-RAY DIFFRACTION | 2.78 |
| 7CEB | X-RAY DIFFRACTION | 2.89 |
| 8JG5 | ELECTRON MICROSCOPY | 3.04 |
| 7CEC | ELECTRON MICROSCOPY | 3.9 |
| 2JO8 | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q13043-F1 | 76.45 | 0.49 |
Antibody-complex structures (SAbDab): 5 — 7CEA, 7CEB, 7CEC, 8JG5, 9VX3
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (3): 326–327 (cleavage; by caspase-3); 349–350 (cleavage; by caspase-3); 149 (proton acceptor)
Ligand- & substrate-binding residues (2): 36–44; 59
Post-translational modifications (11): 1, 3, 183, 265, 320, 340, 367, 387, 410, 414, 433
Mutagenesis-validated functional residues (7):
| Position | Phenotype |
|---|---|
| 59 | loss of activity. |
| 175 | no effect on activity. |
| 177 | no effect on activity. |
| 183 | loss of activity. |
| 326 | resistant to proteolytic cleavage by caspase during apoptosis; when associated with n-349. |
| 349 | resistant to proteolytic cleavage by caspase during apoptosis; when associated with n-326. |
| 444 | loss of homodimerization, activation, and autophosphorylation. |
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-2028269 | Signaling by Hippo |
| R-HSA-162582 | Signal Transduction |
MSigDB gene sets: 763 (showing top):
MODULE_172, GOBP_MORPHOGENESIS_OF_AN_EPITHELIUM, GCACCTT_MIR18A_MIR18B, VERHAAK_AML_WITH_NPM1_MUTATED_DN, MODULE_97, RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP, GOBP_EMBRYONIC_HEMOPOIESIS, GOBP_EMBRYO_DEVELOPMENT_ENDING_IN_BIRTH_OR_EGG_HATCHING, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_REGULATION_OF_FAT_CELL_DIFFERENTIATION, GRUETZMANN_PANCREATIC_CANCER_DN, LU_IL4_SIGNALING, GOBP_REGULATION_OF_PHOSPHORYLATION, GOBP_INTRACELLULAR_PROTEIN_TRANSPORT, GAANYNYGACNY_UNKNOWN
GO Biological Process (43): cell morphogenesis (GO:0000902), branching involved in blood vessel morphogenesis (GO:0001569), neural tube formation (GO:0001841), positive regulation of protein phosphorylation (GO:0001934), endocardium development (GO:0003157), protein phosphorylation (GO:0006468), protein import into nucleus (GO:0006606), apoptotic process (GO:0006915), signal transduction (GO:0007165), central nervous system development (GO:0007417), extrinsic apoptotic signaling pathway via death domain receptors (GO:0008625), peptidyl-serine phosphorylation (GO:0018105), keratinocyte differentiation (GO:0030216), positive regulation of peptidyl-serine phosphorylation (GO:0033138), organ growth (GO:0035265), hippo signaling (GO:0035329), positive regulation of hippo signaling (GO:0035332), intracellular signal transduction (GO:0035556), positive regulation of apoptotic process (GO:0043065), regulation of MAPK cascade (GO:0043408), positive regulation of fat cell differentiation (GO:0045600), negative regulation of organ growth (GO:0046621), protein autophosphorylation (GO:0046777), epithelial cell proliferation (GO:0050673), negative regulation of epithelial cell proliferation (GO:0050680), protein stabilization (GO:0050821), protein tetramerization (GO:0051262), canonical Wnt signaling pathway (GO:0060070), primitive hemopoiesis (GO:0060215), cell differentiation involved in embryonic placenta development (GO:0060706), regulation of cell differentiation involved in embryonic placenta development (GO:0060800), negative regulation of canonical Wnt signaling pathway (GO:0090090), hepatocyte apoptotic process (GO:0097284), positive regulation of extrinsic apoptotic signaling pathway via death domain receptors (GO:1902043), positive regulation of hepatocyte apoptotic process (GO:1903945), positive regulation of substrate-dependent cell migration, cell attachment to substrate (GO:1904237), MAPK cascade (GO:0000165), cell population proliferation (GO:0008283), negative regulation of cell population proliferation (GO:0008285), anatomical structure morphogenesis (GO:0009653)
GO Molecular Function (16): magnesium ion binding (GO:0000287), protein kinase activity (GO:0004672), protein serine/threonine kinase activity (GO:0004674), ATP binding (GO:0005524), identical protein binding (GO:0042802), protein homodimerization activity (GO:0042803), protein serine/threonine kinase activator activity (GO:0043539), RNA polymerase II-specific DNA-binding transcription factor binding (GO:0061629), protein serine kinase activity (GO:0106310), nucleotide binding (GO:0000166), MAP kinase kinase activity (GO:0004708), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740), protein kinase binding (GO:0019901), metal ion binding (GO:0046872)
GO Cellular Component (6): nucleus (GO:0005634), nucleoplasm (GO:0005654), cytoplasm (GO:0005737), cytosol (GO:0005829), nuclear body (GO:0016604), protein-containing complex (GO:0032991)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Signal Transduction | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| protein phosphorylation | 2 |
| intracellular anatomical structure | 2 |
| MAPK cascade | 2 |
| protein kinase activity | 2 |
| anatomical structure morphogenesis | 1 |
| angiogenesis | 1 |
| blood vessel morphogenesis | 1 |
| branching morphogenesis of an epithelial tube | 1 |
| embryonic epithelial tube formation | 1 |
| neural tube development | 1 |
| regulation of protein phosphorylation | 1 |
| positive regulation of protein modification process | 1 |
| positive regulation of phosphorylation | 1 |
| heart development | 1 |
| anatomical structure development | 1 |
| phosphorylation | 1 |
| protein modification process | 1 |
| intracellular protein transport | 1 |
| protein localization to nucleus | 1 |
| import into nucleus | 1 |
| establishment of protein localization to organelle | 1 |
| programmed cell death | 1 |
| apoptotic signaling pathway | 1 |
| execution phase of apoptosis | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| nervous system development | 1 |
| system development | 1 |
| extrinsic apoptotic signaling pathway | 1 |
| peptidyl-serine modification | 1 |
| epidermal cell differentiation | 1 |
| skin development | 1 |
| positive regulation of protein phosphorylation | 1 |
| peptidyl-serine phosphorylation | 1 |
| regulation of peptidyl-serine phosphorylation | 1 |
| multicellular organismal process | 1 |
Protein interactions and networks
STRING
1070 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| STK4 | SAV1 | Q9H4B6 | 995 |
| STK4 | MOB1A | Q9H8S9 | 904 |
| STK4 | RASSF1 | Q9NS23 | 756 |
| STK4 | MOB1B | Q7L9L4 | 707 |
| STK4 | WWTR1 | Q9GZV5 | 683 |
| STK4 | RASSF5 | Q8WWW0 | 679 |
| STK4 | YAP1 | P46937 | 676 |
| STK4 | TEAD1 | P28347 | 623 |
| STK4 | SCRIB | Q14160 | 607 |
| STK4 | RASSF2 | P50749 | 600 |
| STK4 | MOB3A | Q96BX8 | 583 |
| STK4 | LATS1 | O95835 | 569 |
| STK4 | MBP | P02686 | 568 |
| STK4 | FOXO3 | O43524 | 563 |
| STK4 | LATS2 | Q9NRM7 | 560 |
IntAct
229 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| STK3 | RASSF2 | psi-mi:“MI:0914”(association) | 0.950 |
| SAV1 | STK4 | psi-mi:“MI:0915”(physical association) | 0.940 |
| STK4 | SAV1 | psi-mi:“MI:0915”(physical association) | 0.940 |
| SAV1 | STK4 | psi-mi:“MI:0914”(association) | 0.940 |
| STK4 | RASSF2 | psi-mi:“MI:0914”(association) | 0.930 |
| STK4 | RASSF2 | psi-mi:“MI:0915”(physical association) | 0.930 |
| RASSF2 | STK4 | psi-mi:“MI:0914”(association) | 0.930 |
| STK3 | STK4 | psi-mi:“MI:0915”(physical association) | 0.910 |
| RASSF5 | STK4 | psi-mi:“MI:0915”(physical association) | 0.880 |
| STK4 | RASSF4 | psi-mi:“MI:0915”(physical association) | 0.830 |
| RASSF4 | STK4 | psi-mi:“MI:0915”(physical association) | 0.830 |
| RASSF4 | STK4 | psi-mi:“MI:0914”(association) | 0.830 |
| RASSF3 | STK4 | psi-mi:“MI:0915”(physical association) | 0.820 |
| STK4 | RASSF3 | psi-mi:“MI:0915”(physical association) | 0.820 |
| SLMAP | STK4 | psi-mi:“MI:0915”(physical association) | 0.790 |
| RASSF6 | STK4 | psi-mi:“MI:0915”(physical association) | 0.780 |
| STK4 | RASSF6 | psi-mi:“MI:0915”(physical association) | 0.780 |
| RASSF6 | STK4 | psi-mi:“MI:0914”(association) | 0.780 |
| STK4 | RASSF1 | psi-mi:“MI:0915”(physical association) | 0.730 |
| STK4 | MAP1B | psi-mi:“MI:0914”(association) | 0.730 |
BioGRID (2168): STK4 (Affinity Capture-Western), STK4 (Affinity Capture-MS), STK4 (Affinity Capture-MS), STK4 (Affinity Capture-MS), STK4 (Affinity Capture-MS), STK4 (Affinity Capture-MS), STK4 (Affinity Capture-MS), STK4 (Affinity Capture-MS), STK4 (Affinity Capture-MS), STK4 (Affinity Capture-MS), STK4 (Affinity Capture-MS), ANXA1 (Affinity Capture-MS), CDC37 (Affinity Capture-MS), MAP1B (Affinity Capture-MS), MAP1S (Affinity Capture-MS)
ESM2 similar proteins: A4K2M3, A4K2P5, A4K2Q5, A4K2S1, A4K2T0, A4K2W5, A4K2Y1, A8XJW8, O00506, O54748, O61125, O75914, O88643, P29678, P31938, P35465, P36583, Q01986, Q02750, Q07192, Q08E52, Q13043, Q13153, Q13177, Q13188, Q17850, Q29502, Q5E9L6, Q5ZJK4, Q61036, Q62829, Q63980, Q64303, Q6IP06, Q6P3Q4, Q6PA14, Q7YQL3, Q7YQL4, Q7ZUQ3, Q802A6
Diamond homologs: A0A078CGE6, A0A194W8T8, A2AQW0, A2QHV0, A4K2M3, A4K2P5, A4K2Q5, A4K2S1, A4K2T0, A4K2W5, A4K2Y1, A7A1P0, A8XJW8, A9RVK2, A9SY39, B0LT89, B0XXN8, B5VNQ3, C4YRB7, E9Q3S4, F4HRJ4, G4N7X0, G4NDR3, H2L099, O00506, O14047, O14305, O22040, O22042, O24527, O54748, O61122, O61125, O81472, O95382, P0CY23, P0CY24, P23561, P27636, P28829
SIGNOR signaling
86 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| MST1 | up-regulates | STK4 | phosphorylation |
| STK4 | up-regulates | LATS1 | phosphorylation |
| AKT | down-regulates | STK4 | phosphorylation |
| MAPK8 | up-regulates | STK4 | phosphorylation |
| SAV1 | up-regulates | STK4 | binding |
| STK4 | unknown | H2BC3 | phosphorylation |
| RASSF1 | up-regulates | STK4 | binding |
| STK4 | up-regulates | LATS2 | phosphorylation |
| STK4 | up-regulates | MOB1A | phosphorylation |
| STK4 | up-regulates | MOB1B | phosphorylation |
| STK4 | up-regulates | FOXO1 | phosphorylation |
| STK4 | up-regulates | FOXO3 | phosphorylation |
| STK4 | up-regulates | FOXO4 | phosphorylation |
| STK4 | down-regulates | ABL1 | phosphorylation |
| STK4 | unknown | TNNI3 | phosphorylation |
| RAF1 | down-regulates | STK4 | binding |
| TAOK3 | up-regulates | STK4 | phosphorylation |
| AKT2 | down-regulates | STK4 | phosphorylation |
| AKT3 | down-regulates | STK4 | phosphorylation |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 148 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Activation of BAD and translocation to mitochondria | 5 | 38.1× | 7e-05 |
| Signaling by Hippo | 5 | 27.2× | 2e-04 |
| Activation of BH3-only proteins | 5 | 24.8× | 2e-04 |
| Intrinsic Pathway for Apoptosis | 6 | 17.6× | 2e-04 |
| Apoptosis | 7 | 11.8× | 2e-04 |
| Translocation of SLC2A4 (GLUT4) to the plasma membrane | 7 | 10.8× | 3e-04 |
| Macroautophagy | 9 | 10.4× | 7e-05 |
| Programmed Cell Death | 7 | 10.2× | 3e-04 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| mitophagy | 11 | 27.3× | 1e-10 |
| autophagosome maturation | 7 | 19.2× | 3e-05 |
| regulation of signal transduction by p53 class mediator | 5 | 15.0× | 4e-03 |
| autophagosome assembly | 8 | 14.0× | 3e-05 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
310 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 15 |
| Likely pathogenic | 5 |
| Uncertain significance | 127 |
| Likely benign | 128 |
| Benign | 12 |
Top pathogenic / likely-pathogenic (20)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1068530 | NM_006282.5(STK4):c.922C>T (p.Gln308Ter) | Pathogenic |
| 1075656 | NM_006282.5(STK4):c.442C>T (p.Arg148Ter) | Pathogenic |
| 1455329 | NM_006282.5(STK4):c.373G>T (p.Glu125Ter) | Pathogenic |
| 2727529 | NM_006282.5(STK4):c.871C>T (p.Arg291Ter) | Pathogenic |
| 2993502 | NM_006282.5(STK4):c.994C>T (p.Arg332Ter) | Pathogenic |
| 3587269 | NM_006282.5(STK4):c.343C>T (p.Arg115Ter) | Pathogenic |
| 3642667 | NM_006282.5(STK4):c.964G>T (p.Glu322Ter) | Pathogenic |
| 3727861 | NM_006282.5(STK4):c.92dup (p.Asp31fs) | Pathogenic |
| 37323 | NM_006282.5(STK4):c.349C>T (p.Arg117Ter) | Pathogenic |
| 37324 | NM_006282.5(STK4):c.1103del (p.Met368fs) | Pathogenic |
| 37325 | NM_006282.5(STK4):c.749G>A (p.Trp250Ter) | Pathogenic |
| 4695606 | NM_006282.5(STK4):c.297G>A (p.Trp99Ter) | Pathogenic |
| 4717418 | NM_006282.5(STK4):c.1135_1138del (p.Gly379fs) | Pathogenic |
| 4849144 | NC_000020.10:g.(?43595152)(43708663_?)del | Pathogenic |
| 835262 | NM_006282.5(STK4):c.733C>T (p.Arg245Ter) | Pathogenic |
| 1722416 | NM_006282.5(STK4):c.831+2T>C | Likely pathogenic |
| 2020904 | NM_006282.5(STK4):c.36-1G>A | Likely pathogenic |
| 2050900 | NM_006282.5(STK4):c.961-2A>G | Likely pathogenic |
| 2429218 | NM_006282.5(STK4):c.395C>A (p.Ser132Ter) | Likely pathogenic |
| 3587270 | NM_006282.5(STK4):c.775A>T (p.Lys259Ter) | Likely pathogenic |
SpliceAI
5127 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 20:44972070:A:AG | acceptor_gain | 1.0000 |
| 20:44972073:CACA:C | acceptor_loss | 1.0000 |
| 20:44972076:A:AG | acceptor_gain | 1.0000 |
| 20:44972076:AG:A | acceptor_gain | 1.0000 |
| 20:44972077:G:GG | acceptor_gain | 1.0000 |
| 20:44972077:G:GT | acceptor_loss | 1.0000 |
| 20:44972077:GG:G | acceptor_gain | 1.0000 |
| 20:44972077:GGC:G | acceptor_gain | 1.0000 |
| 20:44972077:GGCA:G | acceptor_gain | 1.0000 |
| 20:44972154:GAAGG:G | donor_gain | 1.0000 |
| 20:44972157:GG:G | donor_gain | 1.0000 |
| 20:44972158:GG:G | donor_gain | 1.0000 |
| 20:44973298:A:AG | acceptor_gain | 1.0000 |
| 20:44973298:AAGTT:A | acceptor_gain | 1.0000 |
| 20:44973299:A:G | acceptor_gain | 1.0000 |
| 20:44973300:G:GG | acceptor_gain | 1.0000 |
| 20:44978433:A:AG | acceptor_gain | 1.0000 |
| 20:44978434:A:G | acceptor_gain | 1.0000 |
| 20:44978436:T:G | acceptor_gain | 1.0000 |
| 20:44978439:A:AG | acceptor_gain | 1.0000 |
| 20:44978439:ATAG:A | acceptor_gain | 1.0000 |
| 20:44978440:T:G | acceptor_gain | 1.0000 |
| 20:44978440:TA:T | acceptor_loss | 1.0000 |
| 20:44978441:A:AG | acceptor_gain | 1.0000 |
| 20:44978441:AGGTC:A | acceptor_loss | 1.0000 |
| 20:44978442:G:GA | acceptor_gain | 1.0000 |
| 20:44978442:G:GT | acceptor_loss | 1.0000 |
| 20:44978442:GGTC:G | acceptor_gain | 1.0000 |
| 20:44978568:ACAG:A | donor_gain | 1.0000 |
| 20:44978569:CAG:C | donor_loss | 1.0000 |
AlphaMissense
3241 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 20:44972119:C:A | P26Q | 1.000 |
| 20:44972130:T:C | F30L | 1.000 |
| 20:44972131:T:C | F30S | 1.000 |
| 20:44972132:T:A | F30L | 1.000 |
| 20:44972132:T:G | F30L | 1.000 |
| 20:44972149:T:A | L36H | 1.000 |
| 20:44972149:T:C | L36P | 1.000 |
| 20:44972151:G:A | G37R | 1.000 |
| 20:44972151:G:C | G37R | 1.000 |
| 20:44972152:G:A | G37E | 1.000 |
| 20:44972152:G:T | G37V | 1.000 |
| 20:44972157:G:A | G39R | 1.000 |
| 20:44972157:G:C | G39R | 1.000 |
| 20:44972157:G:T | G39W | 1.000 |
| 20:44972158:G:A | G39E | 1.000 |
| 20:44972158:G:C | G39A | 1.000 |
| 20:44972158:G:T | G39V | 1.000 |
| 20:44978444:T:C | S40P | 1.000 |
| 20:44978447:T:C | Y41H | 1.000 |
| 20:44978450:G:A | G42S | 1.000 |
| 20:44978450:G:C | G42R | 1.000 |
| 20:44978450:G:T | G42C | 1.000 |
| 20:44978451:G:A | G42D | 1.000 |
| 20:44978451:G:T | G42V | 1.000 |
| 20:44978456:G:C | V44L | 1.000 |
| 20:44978456:G:T | V44L | 1.000 |
| 20:44978457:T:A | V44E | 1.000 |
| 20:44978457:T:C | V44A | 1.000 |
| 20:44978464:A:C | K46N | 1.000 |
| 20:44978464:A:T | K46N | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000008293 (20:45003845 T>C), RS1000012317 (20:45065105 T>C), RS1000075904 (20:44972621 A>C,T), RS1000078337 (20:45002389 T>A), RS1000091481 (20:44968797 T>G), RS1000109848 (20:45010814 C>G,T), RS1000148788 (20:45057889 C>G), RS1000200515 (20:44979556 C>T), RS1000239735 (20:45072701 T>G), RS1000254637 (20:45025240 C>A,T), RS1000278333 (20:44997042 G>A,T), RS1000284228 (20:45058872 T>A), RS1000315488 (20:45058266 A>G), RS1000319025 (20:45079273 T>A), RS1000346942 (20:45079646 C>T)
Disease associations
OMIM: gene MIM:604965 | disease phenotypes: MIM:614868
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| combined immunodeficiency due to STK4 deficiency | Definitive | Autosomal recessive |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| combined immunodeficiency due to STK4 deficiency | Definitive | AR |
Mondo (2): combined immunodeficiency due to STK4 deficiency (MONDO:0013934), severe combined immunodeficiency (MONDO:0015974)
Orphanet (2): Combined immunodeficiency due to STK4 deficiency (Orphanet:314689), Severe combined immunodeficiency (Orphanet:183660)
HPO phenotypes
84 total (30 of 84 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000083 | Renal insufficiency |
| HP:0000554 | Uveitis |
| HP:0000716 | Depression |
| HP:0000938 | Osteopenia |
| HP:0000939 | Osteoporosis |
| HP:0000952 | Jaundice |
| HP:0000989 | Pruritus |
| HP:0001081 | Cholelithiasis |
| HP:0001298 | Encephalopathy |
| HP:0001394 | Cirrhosis |
| HP:0001395 | Hepatic fibrosis |
| HP:0001396 | Cholestasis |
| HP:0001402 | Hepatocellular carcinoma |
| HP:0001409 | Portal hypertension |
| HP:0001433 | Hepatosplenomegaly |
| HP:0001541 | Ascites |
| HP:0001581 | Recurrent skin infections |
| HP:0001635 | Congestive heart failure |
| HP:0001655 | Patent foramen ovale |
| HP:0001684 | Secundum atrial septal defect |
| HP:0001733 | Pancreatitis |
| HP:0001744 | Splenomegaly |
| HP:0001824 | Weight loss |
| HP:0001875 | Decreased total neutrophil count |
| HP:0001879 | Abnormal eosinophil morphology |
| HP:0001888 | Decreased total lymphocyte count |
| HP:0001890 | Autoimmune hemolytic anemia |
| HP:0001945 | Fever |
| HP:0001954 | Recurrent fever |
GWAS associations
7 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST008103_18 | Bipolar disorder | 1.000000e-08 |
| GCST008103_27 | Bipolar disorder | 3.000000e-08 |
| GCST011102_23 | Bipolar disorder | 6.000000e-09 |
| GCST012465_42 | Bipolar disorder | 1.000000e-09 |
| GCST90002395_597 | Mean platelet volume | 8.000000e-17 |
| GCST90002395_598 | Mean platelet volume | 1.000000e-15 |
| GCST90002402_592 | Platelet count | 6.000000e-11 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004309 | platelet count |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D016511 | Severe Combined Immunodeficiency | C16.320.798.750; C16.614.815; C18.452.284.800; C20.673.795.750 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL4523663 (PROTEIN FAMILY), CHEMBL4598 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
38 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 178,882 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1289926 | AXITINIB | 4 | 15,732 |
| CHEMBL180022 | NERATINIB | 4 | 9,404 |
| CHEMBL288441 | BOSUTINIB | 4 | 12,255 |
| CHEMBL502835 | NINTEDANIB | 4 | 8,545 |
| CHEMBL535 | SUNITINIB | 4 | 79,020 |
| CHEMBL5416410 | DASATINIB | 4 | 655 |
| CHEMBL601719 | CRIZOTINIB | 4 | 14,403 |
| CHEMBL608533 | MIDOSTAURIN | 4 | 7,259 |
| CHEMBL2105728 | CRENOLANIB | 3 | 2,167 |
| CHEMBL223360 | LINIFANIB | 3 | 3,925 |
| CHEMBL274654 | ORANTINIB | 3 | 3,596 |
| CHEMBL3137331 | DEFACTINIB | 3 | 1,229 |
| CHEMBL491473 | CEDIRANIB | 3 | 9,098 |
| CHEMBL522892 | DOVITINIB | 3 | 4,944 |
| CHEMBL603469 | LESTAURTINIB | 3 | |
| CHEMBL91829 | RUBOXISTAURIN | 3 | 77 |
| CHEMBL1230609 | FORETINIB | 2 | 3,096 |
| CHEMBL1231124 | AZD-1480 | 2 | 1,576 |
| CHEMBL1232461 | MOLIBRESIB | 2 | 1,538 |
| CHEMBL1721885 | SU-014813 | 2 | 363 |
| CHEMBL1738757 | REBASTINIB | 2 | |
| CHEMBL1944698 | ZOTIRACICLIB | 2 | |
| CHEMBL402548 | DANUSERTIB | 2 | |
| CHEMBL4116008 | CERDULATINIB | 2 | |
| CHEMBL572878 | TOZASERTIB | 2 | |
| CHEMBL574737 | UCN-01 | 2 | |
| CHEMBL607707 | PELITINIB | 2 | |
| CHEMBL1084546 | PF-00562271 | 1 | |
| CHEMBL1908397 | KW-2449 | 1 | |
| CHEMBL2041933 | AZD-7762 | 1 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — MST subfamily
Most potent curated ligand interactions (6 total), top 6:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| cerdulatinib | Inhibition | 8.4 | pIC50 |
| IHMT-MST1-58 | Inhibition | 7.64 | pIC50 |
| SBP-3264 | Inhibition | 7.59 | pIC50 |
| bosutinib | Inhibition | 6.72 | pIC50 |
| compound 38 [PMID: 20817473] | Inhibition | 6.39 | pIC50 |
| XMU-MP-1 | Inhibition | 6.31 | pIC50 |
Binding affinities (BindingDB)
9 measured of 10 human assays (10 total across all organisms); most potent 9 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| Staurosporine | KD | 1.7 nM |
| PKC-412 | KD | 190 nM |
| 1-[4-(3-amino-1H-indazol-4-yl)phenyl]-3-(2-fluoro-5-methyl-phenyl)urea | KD | 450 nM |
| (3Z)-4-amino-5-fluoro-3-[5-(4-methylpiperazino)-1,3-dihydrobenzimidazol-2-ylidene]carbostyril | KD | 520 nM |
| N-[4-({4-[(3-methyl-1H-pyrazol-5-yl)amino]-6-(4-methylpiperazin-1-yl)pyrimidin-2-yl}sulfanyl)phenyl]cyclopropanecarboxamide | KD | 1100 nM |
| 5-[(Z)-(5-fluoranyl-2-oxidanylidene-1H-indol-3-ylidene)methyl]-2,4-dimethyl-N-[(2S)-3-morpholin-4-yl-2-oxidanyl-propyl]-1H-pyrrole-3-carboxamide | KD | 2600 nM |
| 1-Acyl-1H-[1,2,4]triazole-3,5-diamine Analogue 3b | KD | 3100 nM |
| (E)-N-[4-(3-chloro-4-fluoro-anilino)-3-cyano-7-ethoxy-6-quinolyl]-4-(dimethylamino)but-2-enamide | KD | 3500 nM |
| N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carboxamide | KD | 3500 nM |
ChEMBL bioactivities
362 potent at pChembl≥5 of 371 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
PubChem BioAssay actives
211 with measured affinity, of 1500 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (2S,3R,4R,6R)-3-methoxy-2-methyl-4-(methylamino)-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-16-one | 2090804: Inhibition of MST1 (unknown origin) expressed in HEK293T cells using NanoGlo as substrate incubated for 20 hrs by NanoBRET assay | ec50 | 0.0002 | uM |
| (15S,16S,18R)-16-hydroxy-16-(hydroxymethyl)-15-methyl-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8,10,12,20,22,24,26-nonaen-3-one | 507631: Binding affinity to MST1 | kd | 0.0030 | uM |
| 3-(2,2-difluoro-10,12-dimethyl-1-aza-3-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-3,5,7,9,11-pentaen-4-yl)-N-[2-[2-[2-[2-[[(2S,3R,4R,6R)-3-methoxy-2-methyl-16-oxo-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-4-yl]-methylamino]ethoxy]ethoxy]ethoxy]ethyl]propanamide | 1526304: Binding affinity to recombinant full-length N-terminal His-FLAG-GST-tagged STK4 (unknown origin) expressed in baculovirus infected Sf9 insect cells incubated for 1 hr by TR-FRET assay | kd | 0.0040 | uM |
| 4-(cyclopropylamino)-2-[4-(4-ethylsulfonylpiperazin-1-yl)anilino]pyrimidine-5-carboxamide | 1993890: Inhibition of MST1 (unknown origin) | ic50 | 0.0040 | uM |
| 3-(2,2-difluoro-10,12-dimethyl-1-aza-3-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-3,5,7,9,11-pentaen-4-yl)-N-[2-[2-[2-[2-[[(2S,3R,4R,6R)-3-methoxy-2-methyl-16-oxo-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-4-yl]amino]ethoxy]ethoxy]ethoxy]ethyl]propanamide | 1526304: Binding affinity to recombinant full-length N-terminal His-FLAG-GST-tagged STK4 (unknown origin) expressed in baculovirus infected Sf9 insect cells incubated for 1 hr by TR-FRET assay | kd | 0.0070 | uM |
| methyl 2-hydroxy-3-[N-[4-[methyl-[2-(4-methylpiperazin-1-yl)acetyl]amino]phenyl]-C-phenylcarbonimidoyl]-1H-indole-6-carboxylate | 625055: Binding constant for MST1 kinase domain | kd | 0.0090 | uM |
| 4-[(2,9-dimethyl-8-oxo-6-thia-2,9,12,14-tetrazatricyclo[8.4.0.03,7]tetradeca-1(14),3(7),4,10,12-pentaen-13-yl)amino]benzenesulfonamide | 2189163: Inhibition of MST1 (unknown origin) in presence of ATP by enzymatic assay | ic50 | 0.0098 | uM |
| Midostaurin | 507631: Binding affinity to MST1 | kd | 0.0170 | uM |
| Sunitinib | 435433: Binding constant for full-length MST1 | kd | 0.0190 | uM |
| 4-[[5,8-dimethyl-7-(2-methylphenyl)-6-oxo-7H-pteridin-2-yl]amino]benzenesulfonamide | 1887162: Inhibition of recombinant full length N-terminal GST -tagged human MST1 expressed in baculovirus infected Sf9 insect cells using KKSRGDYMTMQIG as substrate incubated for 1 hr in presence of ATP by ADP-Glo luminescent assay | ic50 | 0.0230 | uM |
| N-[1-[5-(3-chlorophenyl)-7H-pyrrolo[2,3-d]pyrimidin-4-yl]piperidin-4-yl]acetamide | 1820716: Inhibition of recombinant N-terminal His6-tagged human STK4 (43 to 431 residues) expressed in Escherichia coli using myelin basic protein as substrate in presence of ATP by ADP-Glo luminescence kinase assay | ic50 | 0.0260 | uM |
| methyl (15S,16R,18R)-16-hydroxy-15-methyl-3-oxo-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8,10,12,20,22,24,26-nonaene-16-carboxylate | 1425185: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.0290 | uM |
| 4-[3-(3-chlorophenyl)-1H-pyrrolo[2,3-b]pyridin-4-yl]morpholine | 1820721: Binding affinity to recombinant N-terminal His6-tagged human STK4 (43 to 431 residues) expressed in Escherichia coli assessed as inhibition constant | ki | 0.0330 | uM |
| 4-[5-(3-chlorophenyl)-7H-pyrrolo[2,3-d]pyrimidin-4-yl]morpholine | 1820716: Inhibition of recombinant N-terminal His6-tagged human STK4 (43 to 431 residues) expressed in Escherichia coli using myelin basic protein as substrate in presence of ATP by ADP-Glo luminescence kinase assay | ic50 | 0.0350 | uM |
| 4-[5-(3-methylphenyl)-7H-pyrrolo[2,3-d]pyrimidin-4-yl]morpholine | 1820716: Inhibition of recombinant N-terminal His6-tagged human STK4 (43 to 431 residues) expressed in Escherichia coli using myelin basic protein as substrate in presence of ATP by ADP-Glo luminescence kinase assay | ic50 | 0.0350 | uM |
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149512: Binding affinity to human STK4 incubated for 45 mins by Kinobead based pull down assay | kd | 0.0380 | uM |
| 3-[[5-(3-chlorophenyl)-7H-pyrrolo[2,3-d]pyrimidin-4-yl]-methylamino]-2-methylpropan-1-ol | 1820716: Inhibition of recombinant N-terminal His6-tagged human STK4 (43 to 431 residues) expressed in Escherichia coli using myelin basic protein as substrate in presence of ATP by ADP-Glo luminescence kinase assay | ic50 | 0.0380 | uM |
| 4-[[7-(2,6-difluorophenyl)-5,8-dimethyl-6-oxo-7H-pteridin-2-yl]amino]benzenesulfonamide | 1887162: Inhibition of recombinant full length N-terminal GST -tagged human MST1 expressed in baculovirus infected Sf9 insect cells using KKSRGDYMTMQIG as substrate incubated for 1 hr in presence of ATP by ADP-Glo luminescent assay | ic50 | 0.0420 | uM |
| 5-(3-chlorophenyl)-4-piperidin-1-yl-7H-pyrrolo[2,3-d]pyrimidine | 1820716: Inhibition of recombinant N-terminal His6-tagged human STK4 (43 to 431 residues) expressed in Escherichia coli using myelin basic protein as substrate in presence of ATP by ADP-Glo luminescence kinase assay | ic50 | 0.0480 | uM |
| 5-cyano-N-[2-(cyclohexen-1-yl)-4-[1-[2-(dimethylamino)acetyl]piperidin-4-yl]phenyl]-1H-imidazole-2-carboxamide;hydrochloride | 625055: Binding constant for MST1 kinase domain | kd | 0.0480 | uM |
| 3-(4-morpholin-4-yl-7H-pyrrolo[2,3-d]pyrimidin-5-yl)benzamide | 1820716: Inhibition of recombinant N-terminal His6-tagged human STK4 (43 to 431 residues) expressed in Escherichia coli using myelin basic protein as substrate in presence of ATP by ADP-Glo luminescence kinase assay | ic50 | 0.0500 | uM |
| 4-[[7-(2-ethylphenyl)-5,8-dimethyl-6-oxo-7H-pteridin-2-yl]amino]benzenesulfonamide | 1887162: Inhibition of recombinant full length N-terminal GST -tagged human MST1 expressed in baculovirus infected Sf9 insect cells using KKSRGDYMTMQIG as substrate incubated for 1 hr in presence of ATP by ADP-Glo luminescent assay | ic50 | 0.0510 | uM |
| N-cyclopropyl-4-[[5,8-dimethyl-7-(2-methylphenyl)-6-oxo-7H-pteridin-2-yl]amino]benzenesulfonamide | 1887162: Inhibition of recombinant full length N-terminal GST -tagged human MST1 expressed in baculovirus infected Sf9 insect cells using KKSRGDYMTMQIG as substrate incubated for 1 hr in presence of ATP by ADP-Glo luminescent assay | ic50 | 0.0530 | uM |
| 3-(carbamoylamino)-5-(3-fluorophenyl)-N-[(3S)-piperidin-3-yl]thiophene-2-carboxamide | 1425185: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.0560 | uM |
| 4-[[5,8-dimethyl-6-oxo-7-[2-(trifluoromethyl)phenyl]-7H-pteridin-2-yl]amino]benzenesulfonamide | 1887162: Inhibition of recombinant full length N-terminal GST -tagged human MST1 expressed in baculovirus infected Sf9 insect cells using KKSRGDYMTMQIG as substrate incubated for 1 hr in presence of ATP by ADP-Glo luminescent assay | ic50 | 0.0560 | uM |
| 4-[[7-(2-bromophenyl)-5,8-dimethyl-6-oxo-7H-pteridin-2-yl]amino]benzenesulfonamide | 1887162: Inhibition of recombinant full length N-terminal GST -tagged human MST1 expressed in baculovirus infected Sf9 insect cells using KKSRGDYMTMQIG as substrate incubated for 1 hr in presence of ATP by ADP-Glo luminescent assay | ic50 | 0.0570 | uM |
| 4-[5-(3-fluorophenyl)-7H-pyrrolo[2,3-d]pyrimidin-4-yl]morpholine | 1820716: Inhibition of recombinant N-terminal His6-tagged human STK4 (43 to 431 residues) expressed in Escherichia coli using myelin basic protein as substrate in presence of ATP by ADP-Glo luminescence kinase assay | ic50 | 0.0590 | uM |
| N-(cyclopropylmethyl)-4-[[5,8-dimethyl-7-(2-methylphenyl)-6-oxo-7H-pteridin-2-yl]amino]benzenesulfonamide | 1887162: Inhibition of recombinant full length N-terminal GST -tagged human MST1 expressed in baculovirus infected Sf9 insect cells using KKSRGDYMTMQIG as substrate incubated for 1 hr in presence of ATP by ADP-Glo luminescent assay | ic50 | 0.0600 | uM |
| 1-[6-(3,5-dichloro-4-hydroxyphenyl)-4-[[4-[(dimethylamino)methyl]cyclohexyl]amino]-1,5-naphthyridin-3-yl]ethanone | 1425185: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.0670 | uM |
| 4-[[7-(2-fluorophenyl)-5,8-dimethyl-6-oxo-7H-pteridin-2-yl]amino]benzenesulfonamide | 1887162: Inhibition of recombinant full length N-terminal GST -tagged human MST1 expressed in baculovirus infected Sf9 insect cells using KKSRGDYMTMQIG as substrate incubated for 1 hr in presence of ATP by ADP-Glo luminescent assay | ic50 | 0.0750 | uM |
| 4-[[5,8-dimethyl-7-(2-methylpropyl)-6-oxo-7H-pteridin-2-yl]amino]benzenesulfonamide | 1887162: Inhibition of recombinant full length N-terminal GST -tagged human MST1 expressed in baculovirus infected Sf9 insect cells using KKSRGDYMTMQIG as substrate incubated for 1 hr in presence of ATP by ADP-Glo luminescent assay | ic50 | 0.0770 | uM |
| N-(cyclopropylmethyl)-4-[[7-(2,6-difluorophenyl)-5,8-dimethyl-6-oxo-7H-pteridin-2-yl]amino]benzenesulfonamide | 1887162: Inhibition of recombinant full length N-terminal GST -tagged human MST1 expressed in baculovirus infected Sf9 insect cells using KKSRGDYMTMQIG as substrate incubated for 1 hr in presence of ATP by ADP-Glo luminescent assay | ic50 | 0.0790 | uM |
| 2-[[5-(3-chlorophenyl)-7H-pyrrolo[2,3-d]pyrimidin-4-yl]-methylamino]ethanol | 1820716: Inhibition of recombinant N-terminal His6-tagged human STK4 (43 to 431 residues) expressed in Escherichia coli using myelin basic protein as substrate in presence of ATP by ADP-Glo luminescence kinase assay | ic50 | 0.0790 | uM |
| 1-[5-(3-chlorophenyl)-7H-pyrrolo[2,3-d]pyrimidin-4-yl]piperidin-4-ol | 1820716: Inhibition of recombinant N-terminal His6-tagged human STK4 (43 to 431 residues) expressed in Escherichia coli using myelin basic protein as substrate in presence of ATP by ADP-Glo luminescence kinase assay | ic50 | 0.0800 | uM |
| 5-(3-chlorophenyl)-N,N-dimethyl-7H-pyrrolo[2,3-d]pyrimidin-4-amine | 1820716: Inhibition of recombinant N-terminal His6-tagged human STK4 (43 to 431 residues) expressed in Escherichia coli using myelin basic protein as substrate in presence of ATP by ADP-Glo luminescence kinase assay | ic50 | 0.0810 | uM |
| 4-[(5,8-dimethyl-6-oxo-7-thiophen-2-yl-7H-pteridin-2-yl)amino]benzenesulfonamide | 1887162: Inhibition of recombinant full length N-terminal GST -tagged human MST1 expressed in baculovirus infected Sf9 insect cells using KKSRGDYMTMQIG as substrate incubated for 1 hr in presence of ATP by ADP-Glo luminescent assay | ic50 | 0.0880 | uM |
| 4-(5-thiophen-2-yl-7H-pyrrolo[2,3-d]pyrimidin-4-yl)morpholine | 1820716: Inhibition of recombinant N-terminal His6-tagged human STK4 (43 to 431 residues) expressed in Escherichia coli using myelin basic protein as substrate in presence of ATP by ADP-Glo luminescence kinase assay | ic50 | 0.0910 | uM |
| N-[2-[(1R,4R)-2,5-diazabicyclo[2.2.1]heptan-2-yl]-5-fluorophenyl]-2-(2-fluoro-6-methoxyphenyl)pyrimidine-4-carboxamide | 1922873: Inhibition of STK4 (unknown origin) incubated for 90 mins in presence of ATP by microplate reader assay | ic50 | 0.0940 | uM |
| 3-[[5-(3-chlorophenyl)-7H-pyrrolo[2,3-d]pyrimidin-4-yl]amino]propan-1-ol | 1820716: Inhibition of recombinant N-terminal His6-tagged human STK4 (43 to 431 residues) expressed in Escherichia coli using myelin basic protein as substrate in presence of ATP by ADP-Glo luminescence kinase assay | ic50 | 0.0940 | uM |
| 4-(cyclopropylamino)-2-[4-(4-ethylsulfonylpiperazin-1-yl)anilino]pyrimidine-5-carboxamide;hydrochloride | 1425185: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.1020 | uM |
| 4-[(5’,8’-dimethyl-6’-oxospiro[cyclopropane-1,7’-pteridine]-2’-yl)amino]benzenesulfonamide | 1887162: Inhibition of recombinant full length N-terminal GST -tagged human MST1 expressed in baculovirus infected Sf9 insect cells using KKSRGDYMTMQIG as substrate incubated for 1 hr in presence of ATP by ADP-Glo luminescent assay | ic50 | 0.1030 | uM |
| 4-[[5,8-dimethyl-7-(2-methylphenyl)-6-oxo-7H-pteridin-2-yl]amino]-N-methylbenzenesulfonamide | 1887162: Inhibition of recombinant full length N-terminal GST -tagged human MST1 expressed in baculovirus infected Sf9 insect cells using KKSRGDYMTMQIG as substrate incubated for 1 hr in presence of ATP by ADP-Glo luminescent assay | ic50 | 0.1040 | uM |
| N-[2-[(2S,4S)-4-amino-2-(hydroxymethyl)pyrrolidin-1-yl]-4-(2-methyl-3-pyridinyl)phenyl]-2-(2-fluoro-6-methoxyphenyl)pyrimidine-4-carboxamide | 1922873: Inhibition of STK4 (unknown origin) incubated for 90 mins in presence of ATP by microplate reader assay | ic50 | 0.1120 | uM |
| (2S,3R,4R,6R,18S)-18-hydroxy-3-methoxy-2-methyl-4-(methylamino)-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-16-one | 1425185: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.1140 | uM |
| 4-[[5,8-dimethyl-7-(2-methylphenyl)-6-oxo-7H-pteridin-2-yl]amino]-N-ethylbenzenesulfonamide | 1887162: Inhibition of recombinant full length N-terminal GST -tagged human MST1 expressed in baculovirus infected Sf9 insect cells using KKSRGDYMTMQIG as substrate incubated for 1 hr in presence of ATP by ADP-Glo luminescent assay | ic50 | 0.1190 | uM |
| N-[2-[(1S,4S)-2,5-diazabicyclo[2.2.1]heptan-2-yl]-4-(2-methyl-3-pyridinyl)phenyl]-2-(2-fluoro-6-methoxyphenyl)pyrimidine-4-carboxamide | 1922873: Inhibition of STK4 (unknown origin) incubated for 90 mins in presence of ATP by microplate reader assay | ic50 | 0.1220 | uM |
| 4-[[7-(2-chlorophenyl)-5,8-dimethyl-6-oxo-7H-pteridin-2-yl]amino]benzenesulfonamide | 1887162: Inhibition of recombinant full length N-terminal GST -tagged human MST1 expressed in baculovirus infected Sf9 insect cells using KKSRGDYMTMQIG as substrate incubated for 1 hr in presence of ATP by ADP-Glo luminescent assay | ic50 | 0.1290 | uM |
| 4-[(5’,8’-dimethyl-6’-oxospiro[cyclopentane-1,7’-pteridine]-2’-yl)amino]benzenesulfonamide | 1887162: Inhibition of recombinant full length N-terminal GST -tagged human MST1 expressed in baculovirus infected Sf9 insect cells using KKSRGDYMTMQIG as substrate incubated for 1 hr in presence of ATP by ADP-Glo luminescent assay | ic50 | 0.1290 | uM |
| 5-[(Z)-(5-fluoro-2-oxo-1H-indol-3-ylidene)methyl]-N-[(2S)-2-hydroxy-3-morpholin-4-ylpropyl]-2,4-dimethyl-1H-pyrrole-3-carboxamide | 435433: Binding constant for full-length MST1 | kd | 0.1300 | uM |
| 4-[[5-amino-1-(2,6-difluorobenzoyl)-1,2,4-triazol-3-yl]amino]benzenesulfonamide | 435433: Binding constant for full-length MST1 | kd | 0.1300 | uM |
CTD chemical–gene interactions
50 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects expression, increases expression | 4 |
| methylmercuric chloride | increases expression, affects cotreatment | 3 |
| sodium arsenite | affects methylation, affects cotreatment, increases abundance, increases expression | 3 |
| trichostatin A | affects expression, decreases expression, increases expression | 2 |
| Irinotecan | decreases expression, affects cotreatment, affects response to substance | 2 |
| Acetaminophen | increases expression | 2 |
| Nickel | increases expression | 2 |
| 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide | decreases expression | 2 |
| FR900359 | decreases phosphorylation | 1 |
| XMU-MP-1 | decreases reaction, increases expression | 1 |
| manganese chloride | affects cotreatment, increases abundance, increases expression | 1 |
| potassium chromate(VI) | affects cotreatment, decreases expression | 1 |
| leptomycin B | increases activity, increases reaction | 1 |
| methacrylaldehyde | affects cotreatment, increases oxidation | 1 |
| beta-methylcholine | affects expression | 1 |
| epigallocatechin gallate | affects cotreatment, decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| licochalcone A | decreases expression, increases expression, decreases reaction | 1 |
| ginsenoside Rg3 | increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| torcetrapib | increases expression | 1 |
| abrine | decreases expression | 1 |
| dorsomorphin | affects cotreatment, increases expression | 1 |
| Bortezomib | increases localization, increases reaction, decreases reaction, increases response to substance, increases activity | 1 |
| Sunitinib | increases expression | 1 |
| Acrolein | increases oxidation, affects cotreatment | 1 |
| Arsenic | increases abundance, increases expression, affects cotreatment | 1 |
| Benzo(a)pyrene | increases expression | 1 |
| Chelating Agents | affects binding, increases expression | 1 |
| Copper | affects binding, increases expression | 1 |
ChEMBL screening assays
362 unique, capped per target: 362 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4345771 | Binding | Activation of MST1/2 in human SUM159 cells assessed as effect on phosphorylation at T183/T180 residues at 0.25 to 1.5 uM measured after 12 hrs by Western blot analysis | Targeting YAP Degradation by a Novel 1,2,4-Oxadiazole Derivative via Restoration of the Function of the Hippo Pathway. — ACS Med Chem Lett |
Cellosaurus cell lines
10 cell lines: 9 cancer cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B2HR | Abcam HeLa STK4 KO | Cancer cell line | Female |
| CVCL_B7ZP | Abcam Raji STK4 KO | Cancer cell line | Male |
| CVCL_C0AH | Abcam THP-1 STK4 KO | Cancer cell line | Male |
| CVCL_C7C5 | Abcam PC-3 STK4 KO | Cancer cell line | Male |
| CVCL_D8BT | Ubigene A-549 STK4 KO | Cancer cell line | Male |
| CVCL_D8WL | Ubigene HCT 116 STK4 KO | Cancer cell line | Male |
| CVCL_D9TE | Ubigene HEK293 STK4 KO | Transformed cell line | Female |
| CVCL_E0QB | Ubigene HeLa STK4 KO | Cancer cell line | Female |
| CVCL_TQ95 | HAP1 STK4 (-) 1 | Cancer cell line | Male |
| CVCL_TQ96 | HAP1 STK4 (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
44 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00220766 | PHASE3 | COMPLETED | Rapid Infusion of Immune Globulin Intravenous (Human) In Primary Immunodeficiency Patients |
| NCT01420627 | PHASE3 | COMPLETED | EZN-2279 in Patients With ADA-SCID |
| NCT06940570 | PHASE3 | SUSPENDED | Methadone as an Alternative Treatment for Children Underdoing HSCT |
| NCT00000603 | PHASE2 | COMPLETED | Cord Blood Stem Cell Transplantation Study (COBLT) |
| NCT00794508 | PHASE2 | COMPLETED | MND-ADA Transduction of CD34+ Cells From Children With ADA-SCID |
| NCT01182675 | PHASE2 | TERMINATED | Hematopoietic Stem Cell Transplantation (HSCT) for Children With SCID Utilizing Alemtuzumab, Plerixafor & Filgrastim |
| NCT01529827 | PHASE2 | COMPLETED | Fludarabine Phosphate, Melphalan, and Low-Dose Total-Body Irradiation Followed by Donor Peripheral Blood Stem Cell Transplant in Treating Patients With Hematologic Malignancies |
| NCT01821781 | PHASE2 | ACTIVE_NOT_RECRUITING | Immune Disorder HSCT Protocol |
| NCT02177760 | PHASE2 | WITHDRAWN | Sirolimus Prophylaxis for aGVHD in TME SCID |
| NCT03619551 | PHASE2 | ACTIVE_NOT_RECRUITING | Conditioning SCID Infants Diagnosed Early |
| NCT00008450 | PHASE1 | COMPLETED | Total-Body Irradiation Followed By Cyclosporine and Mycophenolate Mofetil in Treating Patients With Severe Combined Immunodeficiency Undergoing Donor Bone Marrow Transplant |
| NCT00028236 | PHASE1 | COMPLETED | Stem Cell Gene Therapy to Treat X-Linked Severe Combined Immunodeficiency (XSCID) |
| NCT00152100 | PHASE1 | COMPLETED | Transplantation of Hematopoietic Cells in Children With Severe Combined Immunodeficiency Syndrome |
| NCT02860559 | PHASE1 | UNKNOWN | Safety and Early Efficacy Study of TBX-1400 in Patients With Severe Combined Immunodeficiency |
| NCT01019876 | PHASE2/PHASE3 | COMPLETED | Risk-Adapted Allogeneic Stem Cell Transplantation For Mixed Donor Chimerism In Patients With Non-Malignant Diseases |
| NCT00228852 | PHASE1/PHASE2 | COMPLETED | IMM 0212: Busulfan With Fludarabine and Antithymocyte Globulin as Preparative Therapy for Hematopoietic Stem Cell Transplant for the Treatment of Severe Congenital T-Cell Immunodeficiency |
| NCT00579137 | PHASE1/PHASE2 | TERMINATED | Allogeneic SCT Of Pts With SCID And Other Primary Immunodeficiency Disorders |
| NCT01129544 | PHASE1/PHASE2 | COMPLETED | Gene Transfer for Severe Combined Immunodeficiency, X-linked (SCID-X1) Using a Self-inactivating (SIN) Gammaretroviral Vector |
| NCT01852370 | PHASE1/PHASE2 | ENROLLING_BY_INVITATION | Sequential Cadaveric Lung and Bone Marrow Transplant for Immune Deficiency Diseases |
| NCT02127892 | PHASE1/PHASE2 | TERMINATED | SCID Bu/Flu/ATG Study With T Cell Depletion |
| NCT02963064 | PHASE1/PHASE2 | TERMINATED | JSP191 Antibody Targeting Conditioning in SCID Patients |
| NCT03513328 | PHASE1/PHASE2 | COMPLETED | Conditioning Regimen for Allogeneic Hematopoietic Stem-Cell Transplantation |
| NCT03538899 | PHASE1/PHASE2 | RECRUITING | Autologous Gene Therapy for Artemis-Deficient SCID |
| NCT03597594 | PHASE1/PHASE2 | ACTIVE_NOT_RECRUITING | Haplocompatible Transplant Using TCRα/β Depletion Followed by CD45RA-Depleted Donor Lymphocyte Infusions for Severe Combined Immunodeficiency (SCID) |
| NCT00001255 | Not specified | COMPLETED | Gene Transfer Therapy for Severe Combined Immunodeficieny Disease (SCID) Due to Adenosine Deaminase (ADA) Deficiency: A Natural History Study |
| NCT00006054 | Not specified | TERMINATED | Allogeneic Bone Marrow Transplantation in Patients With Primary Immunodeficiencies |
| NCT00006335 | Not specified | COMPLETED | Influences on Female Adolescents’ Decisions Regarding Testing for Carrier Status of XSCID |
| NCT00055172 | Not specified | RECRUITING | Genetic Basis of Immunodeficiency |
| NCT00695279 | Not specified | COMPLETED | Long Term Follow Up Of Patients Who Have Received Gene Therapy Or Gene Marked Products |
| NCT00845416 | Not specified | COMPLETED | Newborn Screening for Severe Combined Immunodeficiency (SCID) in a High-Risk Population |
| NCT01186913 | Not specified | ENROLLING_BY_INVITATION | Natural History Study of SCID Disorders |
| NCT01346150 | Not specified | UNKNOWN | Patients Treated for SCID (1968-Present) |
| NCT01652092 | Not specified | ACTIVE_NOT_RECRUITING | Allogeneic Hematopoietic Stem Cell Transplant for Patients With Primary Immune Deficiencies |
| NCT01953016 | Not specified | COMPLETED | Participation in a Research Registry for Immune Disorders |
| NCT02231983 | Not specified | UNKNOWN | Clinical Characteristics and Genetic Profiles of Severe Combined Immunodeficiency in China |
| NCT02590328 | Not specified | COMPLETED | Neonatal Screening of Severe Combined Immunodeficiencies |
| NCT04049084 | Not specified | ENROLLING_BY_INVITATION | An Observational LTFU Study for Patients Previously Treated With Autologous ex Vivo Gene Therapy for ADA-SCID |
| NCT04172181 | Not specified | UNKNOWN | Multi-center Clinical Study of Cord Blood Stem Cell Transplantation for SCID |
| NCT04246840 | Not specified | COMPLETED | Study Through Imaging of Visceral Lymphoid Organs in Patients With SCID Who Have Recieved Bone Marrow Allograft |
| NCT04331483 | Not specified | WITHDRAWN | A Study to Assess a Physical Activity Program in Children, Adolescents and Young Adults Requiring Hematopoietic Stem Cell Allografts |
Related Atlas pages
- Associated diseases: combined immunodeficiency due to STK4 deficiency
- Targeted by drugs: Bosutinib
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): bipolar disorder, combined immunodeficiency due to STK4 deficiency, severe combined immunodeficiency