STUB1-DT

Summary

STUB1-DT (STUB1 divergent transcript, HGNC:54519) is a long non-coding RNA gene on chromosome 16p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54519
Approved symbol	STUB1-DT
Name	STUB1 divergent transcript
Location	16p13.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	LA16c-313D11.9
Ensembl gene	ENSG00000260394
Ensembl biotype	lncRNA
Entrez	105371184
RNAcentral	URS000001DDD6 — lncRNA, 1220 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 15 — 15 lncRNA

ENST00000567091, ENST00000571933, ENST00000722587, ENST00000722588, ENST00000722589, ENST00000722590, ENST00000722591, ENST00000722592, ENST00000722593, ENST00000722594, ENST00000722595, ENST00000722596, ENST00000722597, ENST00000722598, ENST00000722599

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000567091 — 4 exons

Exon	Start	End
ENSE00002598243	679209	679366
ENSE00002611326	678936	679029
ENSE00004043369	678504	678807
ENSE00004043389	679604	679847

Expression profiles

Bgee: expression breadth ubiquitous, 123 present calls, max score 90.95.

Top tissues by expression

221 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	90.95	gold quality
buccal mucosa cell	CL:0002336	67.84	gold quality
nasal cavity epithelium	UBERON:0005384	64.53	gold quality
pigmented layer of retina	UBERON:0001782	64.20	gold quality
parotid gland	UBERON:0001831	63.62	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	62.38	gold quality
biceps brachii	UBERON:0001507	61.71	gold quality
tendon	UBERON:0000043	60.52	gold quality
secondary oocyte	CL:0000655	60.46	gold quality
lateral nuclear group of thalamus	UBERON:0002736	60.31	gold quality
apex of heart	UBERON:0002098	60.17	gold quality
tendon of biceps brachii	UBERON:0008188	60.00	gold quality
heart right ventricle	UBERON:0002080	59.86	gold quality
myocardium	UBERON:0002349	58.93	gold quality
cerebellar hemisphere	UBERON:0002245	58.86	gold quality
cerebellar cortex	UBERON:0002129	58.69	gold quality
oral cavity	UBERON:0000167	58.68	gold quality
right hemisphere of cerebellum	UBERON:0014890	58.65	gold quality
jejunal mucosa	UBERON:0000399	58.45	gold quality
seminal vesicle	UBERON:0000998	58.22	gold quality
cerebellum	UBERON:0002037	58.21	gold quality
decidua	UBERON:0002450	58.21	gold quality
mammary duct	UBERON:0001765	57.89	gold quality
corpus epididymis	UBERON:0004359	57.86	gold quality
bronchial epithelial cell	CL:0002328	57.56	gold quality
monocyte	CL:0000576	57.10	gold quality
cauda epididymis	UBERON:0004360	57.10	gold quality
caput epididymis	UBERON:0004358	57.07	gold quality
bronchus	UBERON:0002185	56.76	gold quality
vastus lateralis	UBERON:0001379	55.79	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.43

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.