STYK1
gene geneOn this page
Also known as SuRTK106DKFZp761P1010NOK
Summary
STYK1 (serine/threonine/tyrosine kinase 1, HGNC:18889) is a protein-coding gene on chromosome 12p13.2, encoding Tyrosine-protein kinase STYK1 (Q6J9G0). Probable tyrosine protein-kinase, which has strong transforming capabilities on a variety of cell lines.
Receptor protein tyrosine kinases, like STYK1, play important roles in diverse cellular and developmental processes, such as cell proliferation, differentiation, and survival (Liu et al., 2004 [PubMed 15150103]).
Source: NCBI Gene 55359 — RefSeq curated summary.
At a glance
- Clinical variants (ClinVar): 76 total
- MANE Select transcript:
NM_018423
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:18889 |
| Approved symbol | STYK1 |
| Name | serine/threonine/tyrosine kinase 1 |
| Location | 12p13.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | SuRTK106, DKFZp761P1010, NOK |
| Ensembl gene | ENSG00000060140 |
| Ensembl biotype | protein_coding |
| OMIM | 611433 |
| Entrez | 55359 |
Gene structure
Transcript identifiers
Ensembl transcripts: 19 — 19 protein_coding
ENST00000075503, ENST00000535345, ENST00000538867, ENST00000541561, ENST00000542562, ENST00000542924, ENST00000878937, ENST00000878938, ENST00000878939, ENST00000878940, ENST00000878941, ENST00000878942, ENST00000878943, ENST00000878944, ENST00000878945, ENST00000954950, ENST00000954951, ENST00000954952, ENST00000954953
RefSeq mRNA: 1 — MANE Select: NM_018423
NM_018423
CCDS: CCDS8629
Canonical transcript exons
ENST00000075503 — 11 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000482411 | 10624651 | 10624859 |
| ENSE00000720554 | 10621876 | 10621972 |
| ENSE00000720574 | 10622638 | 10622678 |
| ENSE00000720575 | 10627641 | 10627724 |
| ENSE00000720576 | 10629493 | 10629674 |
| ENSE00000720578 | 10631045 | 10631308 |
| ENSE00000720579 | 10633990 | 10634124 |
| ENSE00001145475 | 10618923 | 10620348 |
| ENSE00001145482 | 10634567 | 10634686 |
| ENSE00001161001 | 10637071 | 10637196 |
| ENSE00001161009 | 10673966 | 10674052 |
Expression profiles
Bgee: expression breadth ubiquitous, 219 present calls, max score 97.10.
FANTOM5 (CAGE): breadth broad, TPM avg 0.7208 / max 19.4437, expressed in 353 samples.
FANTOM5 promoters (1 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 129536 | 0.7208 | 353 |
Top tissues by expression
273 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| endothelial cell | CL:0000115 | 97.10 | gold quality |
| amniotic fluid | UBERON:0000173 | 95.37 | gold quality |
| pancreatic ductal cell | CL:0002079 | 93.45 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 91.01 | gold quality |
| rectum | UBERON:0001052 | 86.04 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 85.58 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 84.96 | silver quality |
| epithelium of esophagus | UBERON:0001976 | 84.54 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 84.24 | gold quality |
| squamous epithelium | UBERON:0006914 | 83.87 | gold quality |
| colonic mucosa | UBERON:0000317 | 83.70 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 83.63 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 83.55 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 83.18 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 82.01 | gold quality |
| esophagus mucosa | UBERON:0002469 | 79.62 | gold quality |
| cervix squamous epithelium | UBERON:0006922 | 79.34 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 79.25 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 78.25 | gold quality |
| prefrontal cortex | UBERON:0000451 | 78.08 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 77.67 | gold quality |
| secondary oocyte | CL:0000655 | 77.08 | gold quality |
| minor salivary gland | UBERON:0001830 | 77.00 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 76.83 | gold quality |
| bronchial epithelial cell | CL:0002328 | 76.25 | gold quality |
| transverse colon | UBERON:0001157 | 76.21 | gold quality |
| nasal cavity mucosa | UBERON:0001826 | 75.89 | gold quality |
| type B pancreatic cell | CL:0000169 | 75.61 | gold quality |
| olfactory bulb | UBERON:0002264 | 75.50 | gold quality |
| primary visual cortex | UBERON:0002436 | 75.14 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 5.49 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
71 targeting STYK1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-8485 | 100.00 | 77.57 | 4731 |
| HSA-MIR-513A-5P | 100.00 | 69.77 | 2465 |
| HSA-MIR-4789-3P | 99.99 | 70.75 | 2484 |
| HSA-MIR-511-3P | 99.99 | 68.85 | 1467 |
| HSA-MIR-186-5P | 99.99 | 70.83 | 3707 |
| HSA-MIR-27A-3P | 99.98 | 72.13 | 2955 |
| HSA-MIR-27B-3P | 99.98 | 72.13 | 2955 |
| HSA-MIR-9985 | 99.98 | 72.11 | 2939 |
| HSA-MIR-4482-3P | 99.98 | 72.50 | 3147 |
| HSA-MIR-5688 | 99.96 | 73.23 | 4504 |
| HSA-MIR-495-3P | 99.96 | 72.81 | 4197 |
| HSA-MIR-493-5P | 99.96 | 72.47 | 2382 |
| HSA-MIR-128-3P | 99.95 | 71.17 | 2484 |
| HSA-MIR-216A-3P | 99.95 | 71.19 | 2505 |
| HSA-MIR-627-3P | 99.90 | 71.42 | 3316 |
| HSA-MIR-629-3P | 99.85 | 67.99 | 1875 |
| HSA-MIR-205-5P | 99.81 | 70.05 | 1557 |
| HSA-MIR-6739-5P | 99.80 | 67.87 | 2806 |
| HSA-MIR-204-5P | 99.79 | 71.62 | 2439 |
| HSA-MIR-211-5P | 99.79 | 71.65 | 2440 |
| HSA-MIR-577 | 99.78 | 69.13 | 2479 |
| HSA-MIR-3934-3P | 99.76 | 65.51 | 1351 |
| HSA-MIR-6733-5P | 99.74 | 67.94 | 2759 |
| HSA-MIR-4699-3P | 99.71 | 70.15 | 3142 |
| HSA-MIR-4677-5P | 99.70 | 70.09 | 1940 |
| HSA-MIR-466 | 99.67 | 70.85 | 2863 |
| HSA-MIR-587 | 99.64 | 70.86 | 2611 |
| HSA-MIR-1287-3P | 99.63 | 66.93 | 492 |
| HSA-MIR-4499 | 99.62 | 67.29 | 1470 |
| HSA-MIR-3153 | 99.55 | 67.59 | 2337 |
Literature-anchored findings (GeneRIF, showing 27)
- SuRTK106/NOK/STYK1 was first identified, classified and shown to have predicted pseudokinase domain. (PMID:12471243)
- cloning and characterization; mapped to chromosome 12p13; widely expressed in human tissues (PMID:12841579)
- NOK mRNA was highly expressed even at the early clinical stages of the cancer. These results suggest that NOK mRNA might be a new tool to support the diagnosis of lung cancers, irrespective of the clinical stages. (PMID:17298854)
- The regulation of STYK1/NOK is achieved independent of ERalpha and suggests further investigation to the relevance of this kinase in breast cancer progression. (PMID:17415682)
- results indicate that STYK1/NOK mRNA is widely expressed in the patients with acute leukemia and suggest that inhibition of this molecule could potentially serve as a novel therapeutic target (PMID:19409952)
- Overexpression of the potential kinase serine/ threonine/tyrosine kinase 1 (STYK 1) in castration-resistant prostate cancer. (PMID:19664042)
- Taken together, NOK has a strong tendency towards forming aggregates, which may have physiological implications and provide the first evidence that this novel receptor kinase is colocalised with EGFR in endosomes to participate in a post-internalisation step of EGFR. (PMID:22516751)
- The expression levels of NOK, p-Akt(Thr308) and p-GSK-3beta(Ser9) were positively correlated in cancerous and non-cancerous breast cell lines. (PMID:23010592)
- Our results indicate that NOK expression is of clinical significance and can serve as a prognostic biomarker in non-small cell lung cancer. (PMID:24894011)
- STYK1/NOK is dramatically upregulated in colorectal cancer tissues and could be used as a tumor marker. Furthermore, the high expression of STYK1/NOK is significantly associated with tumor size. (PMID:25169509)
- These results suggest that STYK1 is a novel drug resistance factor and could be a predictor of the therapeutic response in acute leukemia. (PMID:25190507)
- increased STYK1 protein expression correlates with disease progression and metastasis and may serve as a predictor of poor survival in CRC. (PMID:25884558)
- The data indicates that both P203 and V395 residues on NOK are important for NOK mediated mitogenic signaling. (PMID:25961552)
- NOK expression increased in renal cell carcinoma and was significantly correlated with TNM stage, Fuhrman grade, poor overall survival, poor disease-free survival, metastasis, and proliferation. (PMID:27012048)
- Thus, our results reveal a novel tumorigenic function of NOK to mediate the genesis and remodeling of blood and lymphatic vessels during tumor progression. (PMID:27444381)
- High STYK1 expression is associated with intrahepatic cholangiocarcinoma. (PMID:27542675)
- Overexpression of STYK1 was significantly associated with increased cell proliferation, migratory capability, and invasive capability in vitro, as well as increased volume of tumor, weight of tumor, and number of pulmonary metastasesin hepatocellular carcinoma. (PMID:27628214)
- STYK1 plays an important role in glioma development and progression. (PMID:27983928)
- Findings show that serine-threonine-tyrosine kinase 1 (NOK) mediates glycolysis and nuclear pyruvate dehydrogenase complex (PDC) associated histone acetylation. (PMID:28410146)
- Survival analysis reveals that STYK1 level is an independent prognostic factor for nasopharyngeal carcinoma patients. Our results indicate that STYK1 is a promising therapeutic target in nasopharyngeal carcinoma (PMID:28720063)
- findings suggest that STYK1 is a critical regulator of tumor growth and metastasis. (PMID:29413947)
- SMAD3 induces the transcription of STYK1 to promote epithelial-mesenchymal transition and to elicit paclitaxel resistance of ovarian cancer cells. (PMID:30701575)
- elevated serine threonine tyrosine kinase 1 (STYK1) or decreased serine peptidase inhibitor Kunitz type 2 (SPINT2/HAI-2) expression significantly correlated with poor prognosis, tumor invasion, and metastasis of NSCLC patients. STYK1 overexpression promoted NSCLC cells proliferation, migration, and invasion. STYK1 also induced epithelial-mesenchymal transition by E-cadherin downregulation and Snail upregulation. (PMID:31164631)
- Data suggest that regulating ferroptosis could be another cancerous mechanism of serine/threonine/tyrosine kinase 1 (STYK1). (PMID:31542233)
- STYK1 promotes the malignant progression of laryngeal squamous cell carcinoma through targeting TGF-beta1. (PMID:32572882)
- NOK associates with c-Src and promotes c-Src-induced STAT3 activation and cell proliferation. (PMID:32871210)
- Induction of chronic lymphocytic leukemia-like disease in STYK1/NOK transgenic mice. (PMID:35970044)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | styk1b | ENSDARG00000041947 |
| mus_musculus | Styk1 | ENSMUSG00000032899 |
| rattus_norvegicus | Styk1 | ENSRNOG00000010347 |
| caenorhabditis_elegans | WBGENE00012632 |
Paralogs (32): FGR (ENSG00000000938), MATK (ENSG00000007264), BTK (ENSG00000010671), FYN (ENSG00000010810), TNK2 (ENSG00000061938), TXK (ENSG00000074966), JAK2 (ENSG00000096968), ABL1 (ENSG00000097007), PTK6 (ENSG00000101213), HCK (ENSG00000101336), BMX (ENSG00000102010), CSK (ENSG00000103653), TYK2 (ENSG00000105397), JAK3 (ENSG00000105639), FRK (ENSG00000111816), ITK (ENSG00000113263), ZAP70 (ENSG00000115085), PTK2B (ENSG00000120899), SRMS (ENSG00000125508), TEC (ENSG00000135605), BLK (ENSG00000136573), ABL2 (ENSG00000143322), FER (ENSG00000151422), JAK1 (ENSG00000162434), SYK (ENSG00000165025), PTK2 (ENSG00000169398), TNK1 (ENSG00000174292), YES1 (ENSG00000176105), FES (ENSG00000182511), LCK (ENSG00000182866), SRC (ENSG00000197122), LYN (ENSG00000254087)
Protein
Protein identifiers
Tyrosine-protein kinase STYK1 — Q6J9G0 (reviewed: Q6J9G0)
Alternative names: Novel oncogene with kinase domain, Protein PK-unique, Serine/threonine/tyrosine kinase 1
All UniProt accessions (6): Q6J9G0, F5GZF6, F5H2I9, F5H366, F5H4G3, H0YGL5
UniProt curated annotations — full annotation on UniProt →
Function. Probable tyrosine protein-kinase, which has strong transforming capabilities on a variety of cell lines. When overexpressed, it can also induce tumor cell invasion as well as metastasis in distant organs. May act by activating both MAP kinase and phosphatidylinositol 3’-kinases (PI3K) pathways.
Subcellular location. Membrane.
Tissue specificity. Widely expressed. Highly expressed in brain, placenta and prostate. Expressed in tumor cells such as hepatoma cells L-02, cervix carcinoma cells HeLa, ovary cancer cells Ho8910 and chronic myelogenous leukemia cells K-562, but not in other tumor cells such as epidermoid carcinoma (A-431). Undetectable in most normal lung tissues, widely expressed in lung cancers.
Similarity. Belongs to the protein kinase superfamily. Tyr protein kinase family.
RefSeq proteins (1): NP_060893* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000719 | Prot_kinase_dom | Domain |
| IPR001245 | Ser-Thr/Tyr_kinase_cat_dom | Domain |
| IPR008266 | Tyr_kinase_AS | Active_site |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR050122 | RTK | Family |
Pfam: PF07714
Catalyzed reactions (Rhea), 1 shown:
- L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+) (RHEA:10596)
UniProt features (15 total): sequence variant 7, sequence conflict 2, binding site 2, chain 1, transmembrane region 1, domain 1, active site 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q6J9G0-F1 | 84.20 | 0.61 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 251 (proton acceptor)
Ligand- & substrate-binding residues (2): 120–128; 147
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 106 (showing top):
BERTUCCI_MEDULLARY_VS_DUCTAL_BREAST_CANCER_UP, GOMF_PROTEIN_KINASE_ACTIVITY, GOMF_KINASE_ACTIVITY, GOMF_NON_MEMBRANE_SPANNING_PROTEIN_TYROSINE_KINASE_ACTIVITY, MOREAUX_MULTIPLE_MYELOMA_BY_TACI_UP, GOMF_ADENYL_NUCLEOTIDE_BINDING, GOMF_TRANSFERASE_ACTIVITY_TRANSFERRING_PHOSPHORUS_CONTAINING_GROUPS, ZHANG_RESPONSE_TO_IKK_INHIBITOR_AND_TNF_UP, WAMUNYOKOLI_OVARIAN_CANCER_LMP_UP, JOHNSTONE_PARVB_TARGETS_3_DN, WINZEN_DEGRADED_VIA_KHSRP, ANDERSEN_CHOLANGIOCARCINOMA_CLASS2, ZHOU_INFLAMMATORY_RESPONSE_FIMA_DN, ZWANG_TRANSIENTLY_UP_BY_2ND_EGF_PULSE_ONLY, NFE2L2.V2
GO Biological Process (1): protein phosphorylation (GO:0006468)
GO Molecular Function (8): non-membrane spanning protein tyrosine kinase activity (GO:0004715), ATP binding (GO:0005524), nucleotide binding (GO:0000166), protein kinase activity (GO:0004672), protein tyrosine kinase activity (GO:0004713), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740)
GO Cellular Component (2): plasma membrane (GO:0005886), membrane (GO:0016020)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| phosphorylation | 1 |
| protein modification process | 1 |
| protein tyrosine kinase activity | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| kinase activity | 1 |
| phosphotransferase activity, alcohol group as acceptor | 1 |
| catalytic activity, acting on a protein | 1 |
| protein kinase activity | 1 |
| binding | 1 |
| transferase activity, transferring phosphorus-containing groups | 1 |
| catalytic activity | 1 |
| membrane | 1 |
| cell periphery | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
648 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| STYK1 | PALS2 | Q9NZW5 | 762 |
| STYK1 | PALS1 | Q8N3R9 | 693 |
| STYK1 | LIN7A | O14910 | 650 |
| STYK1 | PATJ | Q8NI35 | 635 |
| STYK1 | NSMCE1 | Q8WV22 | 431 |
| STYK1 | MPP1 | Q00013 | 426 |
| STYK1 | ITPKA | P23677 | 394 |
| STYK1 | TMEM239 | Q8WW34 | 392 |
| STYK1 | OR2T5 | Q6IEZ7 | 372 |
| STYK1 | MAGOHB | Q96A72 | 361 |
| STYK1 | TMC7 | Q7Z402 | 360 |
| STYK1 | MLF2 | Q15773 | 338 |
| STYK1 | SSBP2 | P81877 | 334 |
| STYK1 | TMC6 | Q7Z403 | 331 |
| STYK1 | IPP | Q9Y573 | 315 |
IntAct
10 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| GSK3B | AKT1 | psi-mi:“MI:0914”(association) | 0.830 |
| HSP90AB1 | STYK1 | psi-mi:“MI:0915”(physical association) | 0.670 |
| STYK1 | GSK3B | psi-mi:“MI:0915”(physical association) | 0.500 |
| STYK1 | XPO1 | psi-mi:“MI:0914”(association) | 0.350 |
| STYK1 | MYO1C | psi-mi:“MI:0914”(association) | 0.350 |
| STYK1 | HSP90AB4P | psi-mi:“MI:0914”(association) | 0.350 |
| STYK1 | MYO1F | psi-mi:“MI:0914”(association) | 0.350 |
| CACNG4 | TTI1 | psi-mi:“MI:0914”(association) | 0.350 |
| STYK1 | FAM171A2 | psi-mi:“MI:2364”(proximity) | 0.270 |
BioGRID (185): STYK1 (PCA), STYK1 (Protein-RNA), ATG14 (Affinity Capture-Western), BECN1 (Affinity Capture-Western), PIK3C3 (Affinity Capture-Western), PIK3R4 (Affinity Capture-Western), GNB2L1 (Affinity Capture-Western), NRBF2 (Affinity Capture-Western), STYK1 (Affinity Capture-Western), STYK1 (Affinity Capture-Western), BECN1 (Co-localization), PIK3C3 (Co-localization), PIK3R4 (Co-localization), BECN1 (Reconstituted Complex), PIK3C3 (Reconstituted Complex)
ESM2 similar proteins: G5EE56, O13147, O13148, O45539, P00523, P00524, P00525, P00526, P00528, P00529, P04048, P09769, P13115, P13116, P14084, P14085, P14234, P16277, P17713, P22182, P25020, P31693, P32577, P35991, P41239, P41240, P41241, P42680, P42681, P42682, P42685, P42686, P42690, P51451, P63185, P97504, Q03526, Q06187, Q08881, Q0VBZ0
Diamond homologs: A0M8R7, A0M8S8, A1X150, D2IYS2, G3V9H8, O42127, O45539, O76997, P00519, P00520, P00521, P00522, P03949, P06239, P07949, P08581, P08630, P08631, P09760, P10447, P11362, P16092, P18460, P21804, P22182, P22455, P22607, P23049, P32577, P33497, P35546, P35590, P35739, P41239, P41240, P41241, P42684, P42685, P42686, P42688
SIGNOR signaling
1 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| STYK1 | “up-regulates activity” | BECN1 | phosphorylation |
Disease & clinical
Clinical variants and AI predictions
ClinVar
76 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 59 |
| Likely benign | 4 |
| Benign | 2 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1652 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 12:10620349:CT:C | acceptor_loss | 1.0000 |
| 12:10621871:CTTA:C | donor_loss | 1.0000 |
| 12:10621872:TTA:T | donor_loss | 1.0000 |
| 12:10621873:TA:T | donor_loss | 1.0000 |
| 12:10621874:A:AC | donor_gain | 1.0000 |
| 12:10621874:ACATG:A | donor_loss | 1.0000 |
| 12:10621875:C:CA | donor_loss | 1.0000 |
| 12:10621875:C:CC | donor_gain | 1.0000 |
| 12:10621875:CA:C | donor_gain | 1.0000 |
| 12:10621875:CAT:C | donor_gain | 1.0000 |
| 12:10621875:CATG:C | donor_gain | 1.0000 |
| 12:10621875:CATGG:C | donor_gain | 1.0000 |
| 12:10621970:CTC:C | acceptor_gain | 1.0000 |
| 12:10621973:C:A | acceptor_loss | 1.0000 |
| 12:10621973:C:CC | acceptor_gain | 1.0000 |
| 12:10621979:T:TC | acceptor_gain | 1.0000 |
| 12:10624629:AGAGT:A | donor_gain | 1.0000 |
| 12:10624650:CA:C | donor_gain | 1.0000 |
| 12:10624650:CACAT:C | donor_gain | 1.0000 |
| 12:10624654:T:C | donor_gain | 1.0000 |
| 12:10627721:CATC:C | acceptor_gain | 1.0000 |
| 12:10627723:TC:T | acceptor_gain | 1.0000 |
| 12:10627723:TCCTA:T | acceptor_loss | 1.0000 |
| 12:10627724:CC:C | acceptor_gain | 1.0000 |
| 12:10627725:C:CC | acceptor_gain | 1.0000 |
| 12:10627725:CTAA:C | acceptor_loss | 1.0000 |
| 12:10627726:T:C | acceptor_loss | 1.0000 |
| 12:10634138:C:CT | acceptor_gain | 1.0000 |
| 12:10634140:C:CT | acceptor_gain | 1.0000 |
| 12:10620349:C:CC | acceptor_gain | 0.9900 |
AlphaMissense
2743 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 12:10624703:A:G | W292R | 0.992 |
| 12:10624703:A:T | W292R | 0.992 |
| 12:10622652:T:A | E318V | 0.986 |
| 12:10622677:A:G | W310R | 0.984 |
| 12:10622677:A:T | W310R | 0.984 |
| 12:10622668:C:A | G313W | 0.982 |
| 12:10624701:C:A | W292C | 0.980 |
| 12:10624701:C:G | W292C | 0.980 |
| 12:10624816:G:T | A254D | 0.980 |
| 12:10629497:C:G | R210P | 0.979 |
| 12:10622651:C:A | E318D | 0.977 |
| 12:10622651:C:G | E318D | 0.977 |
| 12:10622652:T:G | E318A | 0.977 |
| 12:10622661:A:G | L315P | 0.977 |
| 12:10624704:C:A | K291N | 0.977 |
| 12:10624704:C:G | K291N | 0.977 |
| 12:10622667:C:T | G313E | 0.976 |
| 12:10620327:G:C | C362W | 0.975 |
| 12:10624820:C:G | A253P | 0.974 |
| 12:10621972:C:T | G323E | 0.973 |
| 12:10620305:G:T | R370S | 0.971 |
| 12:10621972:C:A | G323V | 0.971 |
| 12:10627664:C:G | G232R | 0.971 |
| 12:10627664:C:T | G232R | 0.971 |
| 12:10620329:A:G | C362R | 0.970 |
| 12:10621963:G:T | P326Q | 0.970 |
| 12:10620326:A:G | W363R | 0.969 |
| 12:10620326:A:T | W363R | 0.969 |
| 12:10627642:A:G | L239P | 0.969 |
| 12:10622649:A:C | M319R | 0.968 |
dbSNP variants (sampled 300 via entrez): RS1000013879 (12:10658050 T>C), RS1000049330 (12:10664595 G>A), RS1000059472 (12:10665181 T>A), RS1000114283 (12:10638728 C>T), RS1000132673 (12:10621766 G>A,T), RS1000150420 (12:10631535 C>T), RS1000208120 (12:10622055 G>T), RS1000241836 (12:10652481 A>G), RS1000270463 (12:10642401 C>T), RS1000390084 (12:10635125 A>C), RS1000421873 (12:10622935 T>C), RS1000546291 (12:10658688 A>G), RS1000633987 (12:10647663 G>A), RS1000680932 (12:10654905 A>G), RS1000764807 (12:10647992 C>G)
Disease associations
OMIM: gene MIM:611433 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: catalytic receptor — Type XX RTKs: STYK1
CTD chemical–gene interactions
41 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects cotreatment, increases expression, decreases methylation | 7 |
| trichostatin A | increases expression | 2 |
| mercuric bromide | increases expression, affects cotreatment | 2 |
| Panobinostat | increases expression, affects cotreatment | 2 |
| Benzo(a)pyrene | affects methylation, increases expression | 2 |
| Copper | affects cotreatment, decreases expression, affects binding, increases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, increases expression | 2 |
| Silicon Dioxide | decreases expression, increases expression | 2 |
| p-Chloromercuribenzoic Acid | affects cotreatment, increases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| GSK-J4 | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| propionaldehyde | increases expression | 1 |
| 2-methyl-4-isothiazolin-3-one | increases expression | 1 |
| sodium arsenite | increases expression | 1 |
| butyraldehyde | increases expression | 1 |
| pentanal | increases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| entinostat | increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| abrine | increases expression | 1 |
| dorsomorphin | affects cotreatment, increases expression | 1 |
| jinfukang | affects cotreatment, decreases expression | 1 |
| NSC 689534 | increases expression, affects binding | 1 |
| Bortezomib | increases expression | 1 |
| Resveratrol | affects cotreatment, decreases expression | 1 |
| Aldehydes | increases expression | 1 |
| Cisplatin | affects cotreatment, decreases expression | 1 |
| Diethylhexyl Phthalate | increases expression | 1 |
| Drugs, Chinese Herbal | increases expression | 1 |
Cellosaurus cell lines
3 cell lines: 3 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_TR15 | HAP1 STYK1 (-) 1 | Cancer cell line | Male |
| CVCL_TR16 | HAP1 STYK1 (-) 2 | Cancer cell line | Male |
| CVCL_TR17 | HAP1 STYK1 (-) 3 | Cancer cell line | Male |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.