SULT1E1

gene
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Also known as EST

Summary

SULT1E1 (sulfotransferase family 1E member 1, HGNC:11377) is a protein-coding gene on chromosome 4q13.3, encoding Sulfotransferase 1E1 (P49888). Sulfotransferase that utilizes 3’-phospho-5’-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfate conjugation of estradiol and estrone.

Sulfotransferase enzymes catalyze the sulfate conjugation of many hormones, neurotransmitters, drugs, and xenobiotic compounds. These cytosolic enzymes are different in their tissue distributions and substrate specificities. The gene structure (number and length of exons) is similar among family members. This gene encodes a protein that transfers a sulfo moiety to and from estrone, which may control levels of estrogen receptors.

Source: NCBI Gene 6783 — RefSeq curated summary.

At a glance

  • GWAS associations: 1
  • Clinical variants (ClinVar): 50 total
  • Druggable target: yes
  • MANE Select transcript: NM_005420

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:11377
Approved symbolSULT1E1
Namesulfotransferase family 1E member 1
Location4q13.3
Locus typegene with protein product
StatusApproved
AliasesEST
Ensembl geneENSG00000109193
Ensembl biotypeprotein_coding
OMIM600043
Entrez6783

Gene structure

Transcript identifiers

Ensembl transcripts: 13 — 12 protein_coding, 1 retained_intron

ENST00000226444, ENST00000504002, ENST00000904212, ENST00000904213, ENST00000904214, ENST00000904215, ENST00000904216, ENST00000904217, ENST00000904218, ENST00000904219, ENST00000904220, ENST00000904221, ENST00000904222

RefSeq mRNA: 1 — MANE Select: NM_005420 NM_005420

CCDS: CCDS3531

Canonical transcript exons

ENST00000226444 — 8 exons

ExonStartEnd
ENSE000007201786984769869847792
ENSE000007201826984943769849563
ENSE000011803616984121269842106
ENSE000020495026986004969860145
ENSE000034924726985750069857653
ENSE000035333396985421769854314
ENSE000036754196985530169855426
ENSE000038115386984416169844341

Expression profiles

Bgee: expression breadth ubiquitous, 145 present calls, max score 92.69.

FANTOM5 (CAGE): breadth broad, TPM avg 4.4413 / max 849.0808, expressed in 318 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter IDTPM avgSamples expressed
523894.4413318

Top tissues by expression

242 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
penisUBERON:000098992.69gold quality
adrenal tissueUBERON:001830392.23gold quality
right adrenal glandUBERON:000123388.06gold quality
buccal mucosa cellCL:000233687.88gold quality
left adrenal gland cortexUBERON:003582587.48gold quality
left adrenal glandUBERON:000123487.04gold quality
right adrenal gland cortexUBERON:003582786.92gold quality
adrenal cortexUBERON:000123586.28gold quality
skin of legUBERON:000151186.28gold quality
jejunal mucosaUBERON:000039985.37gold quality
skin of abdomenUBERON:000141685.17gold quality
duodenumUBERON:000211485.17gold quality
olfactory segment of nasal mucosaUBERON:000538684.55gold quality
right lobe of liverUBERON:000111484.06gold quality
adrenal glandUBERON:000236984.06gold quality
liverUBERON:000210782.59gold quality
zone of skinUBERON:000001481.86gold quality
mucosa of paranasal sinusUBERON:000503081.18silver quality
vaginaUBERON:000099680.60gold quality
ileal mucosaUBERON:000033179.87gold quality
right lungUBERON:000216779.42gold quality
small intestine Peyer’s patchUBERON:000345478.11gold quality
small intestineUBERON:000210877.52gold quality
nasal cavity mucosaUBERON:000182675.51gold quality
minor salivary glandUBERON:000183074.35gold quality
male germ line stem cell (sensu Vertebrata) in testisCL:0000089 ∩ UBERON:000047374.20gold quality
mouth mucosaUBERON:000372969.97gold quality
nasal cavity epitheliumUBERON:000538468.27silver quality
jejunumUBERON:000211567.72gold quality
metanephrosUBERON:000008167.67gold quality

Single-cell (SCXA)

Detected in 7 experiment(s), a significant marker in 5.

ExperimentMarker?Max mean expression
E-GEOD-114530yes5809.28
E-GEOD-124472yes4702.63
E-HCAD-10yes2920.12
E-GEOD-125970yes9.67
E-GEOD-110499no29.30
E-ENAD-17no10.00
E-ANND-3no0.00

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): AHR, AR, HNF4A, IRF6, NFKB, NR1I2, PPARA, RELA, TFAP2A, TFAP2C, TP63

miRNA regulators (miRDB)

71 targeting SULT1E1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-3613-3P100.0076.367965
HSA-MIR-3163100.0077.238605
HSA-MIR-371B-5P99.9975.344759
HSA-MIR-428299.9975.366408
HSA-MIR-453199.9969.703181
HSA-MIR-373-5P99.9875.364753
HSA-MIR-616-5P99.9875.584775
HSA-MIR-1213699.9872.815713
HSA-MIR-314899.9775.066478
HSA-MIR-570-3P99.9672.414910
HSA-MIR-548AT-5P99.9670.832666
HSA-MIR-6780A-5P99.8866.692776
HSA-MIR-4728-5P99.8569.394718
HSA-MIR-3121-3P99.8271.963630
HSA-MIR-6785-5P99.8268.684428
HSA-MIR-548AJ-5P99.7871.123085
HSA-MIR-548F-5P99.7871.023093
HSA-MIR-548G-5P99.7871.123085
HSA-MIR-548X-5P99.7871.123085
HSA-MIR-1273H-5P99.7766.322471
HSA-MIR-149-3P99.7268.223963
HSA-MIR-30B-3P99.7065.762325
HSA-MIR-3689A-3P99.7065.732306
HSA-MIR-3689B-3P99.7065.712311
HSA-MIR-3689C99.7065.712311
HSA-MIR-6779-5P99.7065.762363
HSA-MIR-128399.6972.423009
HSA-MIR-6883-5P99.6968.053785
HSA-MIR-128499.6773.561353
HSA-MIR-451699.6167.783390

Literature-anchored findings (GeneRIF, showing 40)

  • linkage to SULT1B1 and to a SULT1D1 pseudogene on chromosome 4 (PMID:11688987)
  • crystal structure of human EST (hEST) in the context of the V269E mutant-PAPS complex, which is the first structure containing the active sulfate donor for any sulfotransferase (PMID:11884392)
  • Levels of steroid sulfatase and STS mRNA and activity may be significantly associated with degree of atherosclerotic changes in female aorta, which may be related to cytokines produced in situ, such as IL-1beta, in human atherosclerotic lesions. (PMID:14507642)
  • estrogen-dependent cell growth of the EST-transfected cell clones was found to be abolished, due to the enhanced sulfoconjugation of estrogen (PMID:14556660)
  • Decreased estrogen sulfotransferase expression is associated with estrogen-dependent endometrial carcinomas (PMID:15355916)
  • Women with the SULT1E1 *959 GA/AA genotype had a moderately decreased breast cancer risk compared with those with the GG genotypes. They had an increased risk of recurrence compared with the TT geonotype (PMID:15894657)
  • Sulfation of resveratrol in human liver: evidence of a major role for the sulfotransferases SULT1E1. (PMID:16418064)
  • EST 1E1 mRNA and protein were found to be expressed in epithelial cells bordering alveola lumen (luminal cells) as well as stroma cells in the prostate (PMID:17187396)
  • Altered cellular proliferation was observed in cells stably expressing SULT1E1. (PMID:17293380)
  • Down-regulation of epithelial estrogen sulfotransferase was associated with high-grade ductal carcinoma in situ in breast cancer (PMID:17661084)
  • a decreased single nucleotide polymorphism of CYP1A1 and an increased single nucleotide polymorphism for SULT1A1 and SULT1E1 genes may be risk factors for endometrial cancer in Caucasians. (PMID:18318428)
  • Data show higher levels for EST mRNA were obtained in polycystic ovarian syndrome endometria without treatment versus normal endometria. (PMID:18467089)
  • Activation of glucocorticoid receptor by dexamethasone induced the activity of estrogen sulfotransferase (SULT1E1), an enzyme important for the metabolic deactivation of estrogens, because sulfonated estrogens fail to activate the estrogen receptor. (PMID:18794126)
  • SULT1E1 mRNA is expressed in human skin, at higher levels in men than women (3-4 times greater arm and hip). No gender difference in face skin. SUL1E1 mRNA levels are not altered by topical 17-beta-estradiol treatment. (PMID:18794456)
  • The enhanced SULT1E1 activity may have a role in inhibiting GH-stimulated STAT5b phosphorylation and IGF-1 synthesis via the sulfation and inactivation of E2. (PMID:18831980)
  • Data show that SULT1E1 expression in HepG2 cells is inducible by sterol mediated liver-X-receptor (LXR) activation. (PMID:19429440)
  • Murine SULT1E1 inhibition in vitro and in silico was investigated and compared this to data for the human enzyme. (PMID:20025931)
  • Human EST (a dimer of identical protomers) presents a clear example of half-sites reactivity–only one subunit of the dimer produces product during the catalytic cycle. It is the first example of half-sites reactivity in the sulfotransferase family. (PMID:20429582)
  • Recent results of STS and EST in several estrogen-dependent carcinomas, are summarised. (PMID:21073915)
  • estrogen sulfotransferase is expressed in abdominal sc adipose tissue of both obese males and females in association with expression of TNF-alpha and SOCS3, suggesting potential roles in inflammation. (PMID:21543429)
  • Decrease or deletion of EST in the mammary gland may be related to the development of hypertrophic breast, especially gland-associated hypertrophic breast. (PMID:21548389)
  • Identification of the upstream enhancer of the SULT1E1 promoter that plays a crucial role in regulating the activity of SULT1E1 transcription. (PMID:21764778)
  • results demonstrate that SULT1E1 expression in MCF10A breast epithelial cells cells is transcriptionally regulated by confluence through a suppressive action of the AhR, which is not mediated through a dioxin response element at nt -3476 (PMID:21828262)
  • Using two iterative rounds of evolution, we generated SULT1E1 mutants with increased thermostability. (PMID:22197379)
  • study showed expression patterns of SULT1E1 and PAPSS in breast and endometrial tissues; the estrogen sulfation enzymes were comparatively higher in the tumorous tissues than adjacent normal tissues; overexpression of SULT1E1 and PAPSS1 retarded MCF-7 cells growth in vivo and in vitro by arresting cell cycles and inducing apoptosis (PMID:22380844)
  • Knock-down of SULT1E1 in HUVECs resulted in regulation of genes involved in inflammation and lipid metabolism. (PMID:23384540)
  • Report diterpenoid extracts from Leonurus sibiricus L. with estrogen sulfotransferase inhibitory activity. (PMID:23736977)
  • Data indicate that protein-ligand interaction energy by using docking Quantitative Structure-Activity Relationships(QSAR) models showed accuracy of 67.28%, 78.00% and 75.46%, for the isoforms SULT1A1, SULT1A3 and SULT1E1, respectively. (PMID:24039991)
  • Authors propose that the formation of this DNA loop and protein-bound complex prevents additional binding of ETS1 and p53 R273H proteins to other proximal binding sites. (PMID:24481480)
  • Overexpression of EST promoted adipogenesis. (PMID:24567372)
  • Data suggest that the substrate specificities of SULT1E1 and SULT1A1*1 include metabolites of tamoxifen (endoxifen, 4-hydroxytamoxifen, and N-desmethyltamoxifen); these metabolites are weak inhibitors of sulfation of estradiol by SULT1E1/SULT1A1*1. (PMID:25819444)
  • It metabolizes breast cancer drugs like afimoxifene and endoxifen by sulfation. (PMID:26169578)
  • Data show that both estrogen sulfatase (STS) and estrogen sulfotransferase (EST) were highly expressed in the human umbilical vein (PMID:26458420)
  • a model that enables prediction of substrates and inhibitors of SULT1E1, is reported. (PMID:26542807)
  • Effects of steroid hormone on estrogen sulfotransferase and on steroid sulfatase expression in endometriosis tissue and stromal cells (PMID:26723541)
  • Single nucleotide polymorphisms in SULT1E1 were significantly associated with time to treatment failure in men on abiraterone acetate therapy. The single nucleotide polymorphisms may serve as predictive markers for treatment with abiraterone acetate. (PMID:27150425)
  • Resveratrol and all its derivatives reduced also SULT1E1 mRNA transcript level. The reduced expression of AhR, CYP1A1, and 1B1 was also found as a result of treatment with these compounds. (PMID:27854074)
  • Galeterone and abiraterone are novel inhibitors of DHEA sulfonation, as determined in enzymatic incubations containing human tissue cytosol (liver or intestinal) or human recombinant SULT enzyme (SULT2A1, SULT2B1b, or SULT1E1). (PMID:29436390)
  • Increased expression of SULT1E1 is associated with obstructive cholestasis. (PMID:29929982)
  • CYP19A1 mRNA levels were lower in endometrial cancer (EC) than in controls. A novel highly sensitive and accurate protocol to assess SULT1E1 activity is presented. STS enzyme activity and the STS:SULT1E1 activity ratio seem to be lower in ECs than in controls. STS is an important route for estrogen supply in endometrial cells. (PMID:30217785)

Cross-species orthologs

14 orthologs

OrganismSymbolGene ID
danio_reriosult1st4ENSDARG00000003181
danio_reriosult1st3ENSDARG00000018361
danio_reriosult1st1ENSDARG00000028275
danio_reriosult2st3ENSDARG00000028367
danio_reriosult2st1ENSDARG00000033170
danio_reriosult1st2ENSDARG00000041540
danio_reriosult1st7ENSDARG00000079079
danio_reriosult1st9ENSDARG00000094996
danio_reriosult2st2ENSDARG00000103785
mus_musculusSult1e1ENSMUSG00000029272
rattus_norvegicusSult1e1ENSRNOG00000001957
drosophila_melanogasterSt4FBGN0033887
drosophila_melanogasterSt1FBGN0034887
drosophila_melanogasterSt3FBGN0265052

Paralogs (12): SULT2B1 (ENSG00000088002), SULT2A1 (ENSG00000105398), SULT4A1 (ENSG00000130540), SULT6B1 (ENSG00000138068), SULT1B1 (ENSG00000173597), SULT1C3 (ENSG00000196228), SULT1A1 (ENSG00000196502), SULT1A2 (ENSG00000197165), SULT1C4 (ENSG00000198075), SULT1C2 (ENSG00000198203), SULT1A4 (ENSG00000213648), SULT1A3 (ENSG00000261052)

Protein

Protein identifiers

Sulfotransferase 1E1P49888 (reviewed: P49888)

Alternative names: EST-1, Estrogen sulfotransferase, Sulfotransferase, estrogen-preferring

All UniProt accessions (2): P49888, Q53X91

UniProt curated annotations — full annotation on UniProt →

Function. Sulfotransferase that utilizes 3’-phospho-5’-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfate conjugation of estradiol and estrone. Is a key enzyme in estrogen homeostasis, the sulfation of estrogens leads to their inactivation. Also sulfates dehydroepiandrosterone (DHEA), pregnenolone, (24S)-hydroxycholesterol and xenobiotic compounds like ethinylestradiol, equalenin, diethyl stilbesterol and 1-naphthol at significantly lower efficiency. Does not sulfonate cortisol, testosterone and dopamine. May play a role in gut microbiota-host metabolic interaction. O-sulfonates 4-ethylphenol (4-EP), a dietary tyrosine-derived metabolite produced by gut bacteria. The product 4-EPS crosses the blood-brain barrier and may negatively regulate oligodendrocyte maturation and myelination, affecting the functional connectivity of different brain regions associated with the limbic system.

Subunit / interactions. Homodimer.

Subcellular location. Cytoplasm. Cytosol.

Tissue specificity. Liver, intestine and at lower level in the kidney.

Activity regulation. Inhibited by estradiol.

Similarity. Belongs to the sulfotransferase 1 family.

RefSeq proteins (1): NP_005411* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR000863Sulfotransferase_domDomain
IPR027417P-loop_NTPaseHomologous_superfamily

Pfam: PF00685

Enzyme classification (BRENDA):

  • EC 2.8.2.4 — estrone sulfotransferase (BRENDA: 11 organisms, 222 substrates, 221 inhibitors, 96 Km, 3 kcat entries)

Substrate kinetics (BRENDA)

43 substrates with measured Km, best-characterized 15. Km ranges are aggregated across organisms/conditions.

SubstrateKm (mM)Measurements
17BETA-ESTRADIOL10
ESTRADIOL10
ESTRONE0.0001–0.016610
3’-PHOSPHOADENYLYLSULFATE0.0001–0.0376
DEHYDROEPIANDROSTERONE0.0001–0.06074
ANDROSTENEDIOL0.0009–0.00323
DOPAMINE0.2407–79.353
P-NITROPHENOL0.0766–0.93723
QUERCETIN0.0003–0.0023
RESVERATROL0.0006–0.00693
ADENOSINE 3’,5’-BISPHOSPHATE2
APIGENIN0.00532
CHRYSIN0.00452
EPICATECHIN0.9622
ESTRIOL2

Catalyzed reactions (Rhea), 5 shown:

  • estrone + 3’-phosphoadenylyl sulfate = estrone 3-sulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:15973)
  • 3beta-hydroxyandrost-5-en-17-one + 3’-phosphoadenylyl sulfate = dehydroepiandrosterone 3-sulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:51216)
  • (24S)-hydroxycholesterol + 3’-phosphoadenylyl sulfate = (24S)-hydroxycholesterol 3-sulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:52348)
  • 17beta-estradiol + 3’-phosphoadenylyl sulfate = 17beta-estradiol 3-sulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:52372)
  • 4-ethylphenol + 3’-phosphoadenylyl sulfate = 4-ethylphenyl sulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:70607)

UniProt features (47 total): helix 18, strand 7, binding site 7, mutagenesis site 6, turn 5, chain 1, active site 1, sequence conflict 1, sequence variant 1

Structure

Experimental structures (PDB)

5 structures.

PDBMethodResolution (Å)
1G3MX-RAY DIFFRACTION1.7
1HY3X-RAY DIFFRACTION1.8
4JVLX-RAY DIFFRACTION1.94
4JVMX-RAY DIFFRACTION1.99
4JVNX-RAY DIFFRACTION2.05

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-P49888-F197.240.95

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Catalytic / active sites (1): 107 (proton acceptor)

Ligand- & substrate-binding residues (7): 47–52; 105–107; 129; 137; 192; 226–231; 256–258

Mutagenesis-validated functional residues (6):

PositionPhenotype
85does not have decreased sulfonation activity towards the estrogens and dhea.
107complete loss of sulfonation activity towards all substrates tested.
137decreased gradually the sulfotransferase activity.
145substrate specificity constants for estradiol and estrone are reduced. dramatic 400-fold increase in the ability to sulf
269does not prevent the formation of homodimer.

Function

Pathways and Gene Ontology

Reactome pathways

6 pathways

IDPathway
R-HSA-156584Cytosolic sulfonation of small molecules
R-HSA-9753281Paracetamol ADME
R-HSA-1430728Metabolism
R-HSA-156580Phase II - Conjugation of compounds
R-HSA-211859Biological oxidations
R-HSA-9748784Drug ADME

MSigDB gene sets: 145 (showing top): GOBP_REGULATION_OF_FAT_CELL_DIFFERENTIATION, REACTOME_BIOLOGICAL_OXIDATIONS, GOBP_POSITIVE_REGULATION_OF_FAT_CELL_DIFFERENTIATION, GOBP_REGULATION_OF_HORMONE_LEVELS, GOBP_ORGANOPHOSPHATE_METABOLIC_PROCESS, GOBP_SULFATION, MODULE_404, GOBP_CARBOHYDRATE_DERIVATIVE_METABOLIC_PROCESS, chr4q13, GOBP_NUCLEOBASE_CONTAINING_SMALL_MOLECULE_METABOLIC_PROCESS, GOBP_POSITIVE_REGULATION_OF_CELL_DIFFERENTIATION, FUJIWARA_PARK2_HEPATOCYTE_PROLIFERATION_UP, SCHAEFFER_PROSTATE_DEVELOPMENT_48HR_UP, GOBP_LIPID_METABOLIC_PROCESS, GOBP_ORGANIC_ACID_METABOLIC_PROCESS

GO Biological Process (8): ethanol catabolic process (GO:0006068), estrogen catabolic process (GO:0006711), steroid metabolic process (GO:0008202), estrogen metabolic process (GO:0008210), positive regulation of fat cell differentiation (GO:0045600), 3’-phosphoadenosine 5’-phosphosulfate metabolic process (GO:0050427), sulfation (GO:0051923), lipid metabolic process (GO:0006629)

GO Molecular Function (9): aryl sulfotransferase activity (GO:0004062), estrone sulfotransferase activity (GO:0004304), steroid binding (GO:0005496), sulfotransferase activity (GO:0008146), flavonol 3-sulfotransferase activity (GO:0047894), steroid sulfotransferase activity (GO:0050294), protein binding (GO:0005515), lipid binding (GO:0008289), transferase activity (GO:0016740)

GO Cellular Component (3): cytoplasm (GO:0005737), cytosol (GO:0005829), nuclear membrane (GO:0031965)

Reactome top-level categories

Rollup of top-4 pathways:

CategoryPathways
Phase II - Conjugation of compounds1
Drug ADME1
Biological oxidations1
Metabolism1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
sulfotransferase activity4
sulfur compound metabolic process2
binding2
cellular anatomical structure2
ethanol metabolic process1
primary alcohol catabolic process1
steroid catabolic process1
estrogen metabolic process1
hormone catabolic process1
lipid metabolic process1
steroid metabolic process1
hormone metabolic process1
fat cell differentiation1
positive regulation of cell differentiation1
regulation of fat cell differentiation1
purine ribonucleotide metabolic process1
purine ribonucleoside bisphosphate metabolic process1
oxoacid metabolic process1
primary metabolic process1
lipid binding1
transferase activity, transferring sulphur-containing groups1
catalytic activity1
intracellular anatomical structure1
cytoplasm1
nucleus1
nuclear envelope1
organelle membrane1

Protein interactions and networks

STRING

794 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
SULT1E1TERTO14746996
SULT1E1SMG6Q86US8893
SULT1E1SMG7Q92540875
SULT1E1STSP08842864
SULT1E1SMG5Q9UPR3832
SULT1E1UPF1Q92900722
SULT1E1CCR8P51685712
SULT1E1HSD17B1P14061635
SULT1E1TERF1P54274625
SULT1E1CYP19A1P11511608
SULT1E1UGT1A6P19224592
SULT1E1UGT1A4P22310592
SULT1E1UGT1A10Q9HAW8592
SULT1E1DHRS11Q6UWP2584
SULT1E1HSD17B2P37059582

IntAct

18 interactions, top by confidence:

ABTypeScore
SULT1E1PDE9Apsi-mi:“MI:0915”(physical association)0.560
PDE9ASULT1E1psi-mi:“MI:0915”(physical association)0.560
SULT1E1ENOX1psi-mi:“MI:0915”(physical association)0.370
SULT1E1SULT2B1psi-mi:“MI:0915”(physical association)0.370
SULT1E1PDE9Apsi-mi:“MI:0915”(physical association)0.000
SULT1E1TP53psi-mi:“MI:0915”(physical association)0.000
SULT1E1UNC119psi-mi:“MI:0915”(physical association)0.000
SULT1E1EEF1A1psi-mi:“MI:0915”(physical association)0.000
SULT1E1RIF1psi-mi:“MI:0915”(physical association)0.000
SULT1E1SETDB1psi-mi:“MI:0915”(physical association)0.000
SULT1E1COPS6psi-mi:“MI:0915”(physical association)0.000
SULT1E1RBM48psi-mi:“MI:0915”(physical association)0.000
SULT1E1IGSF21psi-mi:“MI:0915”(physical association)0.000
SULT1E1ERG28psi-mi:“MI:0915”(physical association)0.000

BioGRID (17): SULT1E1 (Two-hybrid), ENOX1 (Two-hybrid), SULT2B1 (Two-hybrid), AGL (Co-fractionation), GK (Co-fractionation), C14orf1 (Two-hybrid), COPS6 (Two-hybrid), RBM48 (Two-hybrid), IGSF21 (Two-hybrid), PDE9A (Two-hybrid), EEF1A1 (Two-hybrid), LRIF1 (Two-hybrid), SETDB1 (Two-hybrid), TP53 (Two-hybrid), UNC119 (Two-hybrid)

ESM2 similar proteins: A0A173GP47, A0A1L8HV70, A0A2K5X3B6, B2RVI8, F1QYJ6, G3V9R3, O00338, O43704, O46503, O75897, P0CC03, P15709, P17988, P19217, P22789, P27707, P46560, P48769, P49887, P49888, P49891, P50234, P50235, P50236, P50237, P52840, P52841, P52843, P52844, P52847, Q06520, Q3T0Y3, Q3UZZ6, Q5ZJM7, Q6IMI4, Q6IMI6, Q6PH37, Q6WG17, Q6WG18, Q7T2V2

Diamond homologs: A0A173GP47, A0A2K5X3B6, G3V9R3, O00338, O35400, O43704, O46503, O46640, O75897, P0DMM9, P0DMN0, P19217, P49887, P49888, P49891, P50236, P50237, P52839, P52840, P52842, P52844, P52847, P63046, P63047, Q29476, Q3T0Y3, Q3UZZ6, Q6IMI6, Q80VR3, Q8BGL3, Q8JG30, Q95JD5, Q9BR01, Q9C9D0, Q9D939, Q9FZ80, Q9QWG7, Q9WUW8, Q9WUW9, B2RVI8

SIGNOR signaling

4 interactions.

AEffectBMechanism
TFAP2A“up-regulates quantity by expression”SULT1E1“transcriptional regulation”
TFAP2C“up-regulates quantity by expression”SULT1E1“transcriptional regulation”
SULT1E1“up-regulates quantity”17beta-estradiol“chemical modification”
SULT1E1“up-regulates quantity”“17beta-estradiol 3-sulfate(1-)”“chemical modification”

Disease & clinical

Cancer significance

Clinical variants and AI predictions

ClinVar

50 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic0
Uncertain significance36
Likely benign4
Benign2

Top pathogenic / likely-pathogenic (0)

SpliceAI

1181 predictions. Top by Δscore:

VariantEffectΔscore
4:69842103:ATTC:Aacceptor_gain1.0000
4:69842104:TTC:Tacceptor_gain1.0000
4:69842105:TC:Tacceptor_gain1.0000
4:69842106:CC:Cacceptor_gain1.0000
4:69842107:C:CCacceptor_gain1.0000
4:69842113:C:CTacceptor_gain1.0000
4:69844157:TCA:Tdonor_loss1.0000
4:69844159:A:AGdonor_loss1.0000
4:69844159:AC:Adonor_gain1.0000
4:69844160:C:CAdonor_loss1.0000
4:69844160:CC:Cdonor_gain1.0000
4:69844337:ATATC:Aacceptor_gain1.0000
4:69844338:TATC:Tacceptor_gain1.0000
4:69844339:ATC:Aacceptor_gain1.0000
4:69844340:TC:Tacceptor_gain1.0000
4:69844341:CC:Cacceptor_gain1.0000
4:69844342:C:CCacceptor_gain1.0000
4:69844342:C:Tacceptor_gain1.0000
4:69844342:CTAG:Cacceptor_loss1.0000
4:69844343:T:Cacceptor_loss1.0000
4:69847793:C:CCacceptor_gain1.0000
4:69857541:G:Adonor_gain1.0000
4:69842102:AATTC:Aacceptor_gain0.9900
4:69842114:A:Tacceptor_gain0.9900
4:69844126:T:TAdonor_gain0.9900
4:69844159:A:ACdonor_gain0.9900
4:69844160:C:CCdonor_gain0.9900
4:69849435:AC:Adonor_gain0.9900
4:69849436:CC:Cdonor_gain0.9900
4:69855291:TGA:Tdonor_gain0.9900

AlphaMissense

1980 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
4:69844171:G:CF254L0.991
4:69844171:G:TF254L0.991
4:69844173:A:GF254L0.991
4:69844165:T:AR256S0.990
4:69844165:T:GR256S0.990
4:69857505:T:AK47I0.990
4:69849537:C:AK132N0.989
4:69849537:C:GK132N0.989
4:69857504:T:AK47N0.989
4:69857504:T:GK47N0.989
4:69855426:C:AG49V0.987
4:69842092:A:GW263R0.986
4:69842092:A:TW263R0.986
4:69849536:C:GD133H0.986
4:69844166:C:GR256T0.985
4:69847778:A:GW171R0.985
4:69847778:A:TW171R0.985
4:69844161:C:GG258R0.984
4:69844161:C:TG258R0.984
4:69857523:A:TV41D0.984
4:69855426:C:TG49D0.983
4:69849547:C:GR129P0.982
4:69855418:A:GW52R0.982
4:69855418:A:TW52R0.982
4:69844240:C:AM231I0.980
4:69844240:C:GM231I0.980
4:69844240:C:TM231I0.980
4:69854280:T:AR102S0.980
4:69854280:T:GR102S0.980
4:69844241:A:GM231T0.979

dbSNP variants (sampled 300 via entrez): RS1000032643 (4:69841529 A>C,G,T), RS1000051817 (4:69840207 C>A,T), RS1000075840 (4:69857262 G>C), RS1000120216 (4:69845916 A>T), RS1000198801 (4:69840797 A>G), RS1000246687 (4:69829801 G>A,T), RS1000249853 (4:69834900 G>T), RS1000308076 (4:69835015 A>C,T), RS1000386777 (4:69821356 G>A), RS1000388659 (4:69858624 G>A), RS1000558994 (4:69851026 T>C), RS1000575474 (4:69845618 T>C), RS1000603121 (4:69850752 C>T), RS1000635653 (4:69833774 C>T), RS1000654155 (4:69840975 G>A,T)

Disease associations

OMIM: gene MIM:600043 | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

1 associations (top):

StudyTraitp-value
GCST006979_434Heel bone mineral density2.000000e-10

EFO canonical traits (1, from GWAS)

EFO IDTrait name
EFO:0009270heel bone mineral density

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL2346 (SINGLE PROTEIN)

PharmGKB: 1 entry (VIP=true, CPIC=false)

PharmGKB variants

2 variants.

VariantGenesLevelScore#Clin annotsDrugs
rs3736599SULT1E10.000
rs3775770SULT1E10.000

ChEMBL bioactivities

2 potent at pChembl≥5 of 3 total, top 2 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
6.60IC50250nMCHEMBL112118
5.52IC503000nMCHEMBL113219

PubChem BioAssay actives

2 with measured affinity, of 19 total; 2 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
6,8-dichloro-3-[(E)-5-[(E)-(3,5-dibromo-4-hydroxyphenyl)methylideneamino]oxypentoxyiminomethyl]chromen-4-one70675: Compound was tested for inhibition against estrogen sulfotransferase (EST), a human cytosolic sulfotransferaseic500.2500uM
3-[(E)-5-[(E)-(5-bromo-2-hydroxy-3-nitrophenyl)methylideneamino]oxypentoxyiminomethyl]-6,8-dichlorochromen-4-one70676: Compound was tested for inhibition against estrogen sulfotransferase (EST), a human cytosolic sulfotransferase.ic503.0000uM

CTD chemical–gene interactions

118 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Estradioldecreases reaction, increases metabolic processing, decreases activity, affects sulfation, affects binding (+5 more)7
bisphenol Adecreases response to substance, increases sulfation, decreases reaction, increases expression, decreases expression (+1 more)5
Resveratrolincreases sulfation, decreases activity, increases abundance, increases expression5
Estronedecreases sulfation, decreases activity, increases sulfation, affects sulfation, affects cotreatment4
Ethinyl Estradiolaffects sulfation, decreases activity, affects cotreatment, decreases sulfation, decreases reaction (+1 more)4
sodium arsenitedecreases expression3
1-hydroxypyrenedecreases activity, increases reaction, increases sulfation, decreases reaction2
perfluorooctane sulfonic aciddecreases expression2
2,2’,4,4’-tetrabromodiphenyl etherdecreases reaction, increases metabolic processing, affects binding, affects cotreatment, decreases activity2
Air Pollutantsdecreases expression, increases abundance2
Benzo(a)pyrenedecreases expression, decreases methylation2
Chenodeoxycholic Aciddecreases expression, affects cotreatment2
Flame Retardantsdecreases reaction, increases metabolic processing, decreases expression2
Folic Aciddecreases reaction, increases activity, increases expression, decreases expression2
Nickeldecreases expression2
Phenobarbitaldecreases expression2
Polychlorinated Biphenylsaffects metabolic processing, decreases reaction, increases sulfation2
Progesteronedecreases reaction, increases expression, affects expression2
Quercetinaffects cotreatment, decreases sulfation, decreases activity, increases sulfation2
Silicon Dioxidedecreases expression2
Smokedecreases expression, increases abundance2
Tetrachlorodibenzodioxinaffects cotreatment, decreases expression2
Tobacco Smoke Pollutiondecreases expression2
Triclosanincreases sulfation, affects cotreatment, decreases expression2
Aflatoxin B1decreases expression, decreases methylation, affects cotreatment2
Cadmium Chloridedecreases expression2
Genisteindecreases expression, decreases activity2
Particulate Matterdecreases expression, increases abundance2
2-hydroxyestradiolaffects sulfation1
2,4-dichlorophenoldecreases activity1

ChEMBL screening assays

18 unique, capped per target: 12 binding, 6 admet

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL1743309ADMETMajor substrate of human cytosolic sulfotransferase SULT1E1Casarett and Doull’s Toxicology The Basic Science of Poisons, 7th edition
CHEMBL4482695BindingSubstrate activity at SULT1E1 (unknown origin) expressed in baculovirus infected Sf9 cells assessed as substrate Km incubated for 15 mins using [35S-]PAPS as sulfate donor by TLC analysisIn vivo imaging of sulfotransferases

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.

No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.