SULT2A1

gene
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Also known as DHEA-ST

Summary

SULT2A1 (sulfotransferase family 2A member 1, HGNC:11458) is a protein-coding gene on chromosome 19q13.33, encoding Sulfotransferase 2A1 (Q06520). Sulfotransferase that utilizes 3’-phospho-5’-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfonation of steroids and bile acids in the liver and adrenal glands.

This gene encodes a member of the sulfotransferase family. Sulfotransferases aid in the metabolism of drugs and endogenous compounds by converting these substances into more hydrophilic water-soluble sulfate conjugates that can be easily excreted. This protein catalyzes the sulfation of steroids and bile acids in the liver and adrenal glands, and may have a role in the inherited adrenal androgen excess in women with polycystic ovary syndrome.

Source: NCBI Gene 6822 — RefSeq curated summary.

At a glance

  • GWAS associations: 21
  • Clinical variants (ClinVar): 37 total
  • Druggable target: yes
  • MANE Select transcript: NM_003167

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:11458
Approved symbolSULT2A1
Namesulfotransferase family 2A member 1
Location19q13.33
Locus typegene with protein product
StatusApproved
AliasesDHEA-ST
Ensembl geneENSG00000105398
Ensembl biotypeprotein_coding
OMIM125263
Entrez6822

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 protein_coding

ENST00000222002, ENST00000903235, ENST00000903236, ENST00000903237, ENST00000903238, ENST00000903239

RefSeq mRNA: 1 — MANE Select: NM_003167 NM_003167

CCDS: CCDS12707

Canonical transcript exons

ENST00000222002 — 6 exons

ExonStartEnd
ENSE000007159524787465747874834
ENSE000007159624787903647879130
ENSE000007159694788208447882210
ENSE000007159914788357747883785
ENSE000013101644787046747871567
ENSE000013212324788612247886315

Expression profiles

Bgee: expression breadth ubiquitous, 106 present calls, max score 99.83.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 2.9604 / max 1020.9269, expressed in 70 samples.

FANTOM5 promoters (5 alternative TSS)

Promoter IDTPM avgSamples expressed
1818002.490464
1817990.347822
1817980.068717
1818010.02737
1817970.02619

Top tissues by expression

269 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
adrenal tissueUBERON:001830399.83gold quality
right adrenal gland cortexUBERON:003582799.24gold quality
jejunal mucosaUBERON:000039998.89gold quality
right adrenal glandUBERON:000123398.86gold quality
right lobe of liverUBERON:000111498.83gold quality
adrenal cortexUBERON:000123598.36gold quality
liverUBERON:000210798.26gold quality
left adrenal gland cortexUBERON:003582598.12gold quality
left adrenal glandUBERON:000123497.75gold quality
adrenal glandUBERON:000236996.06gold quality
duodenumUBERON:000211491.96gold quality
primordial germ cell in gonadCL:0000670 ∩ UBERON:000099181.91gold quality
buccal mucosa cellCL:000233681.16silver quality
seminal vesicleUBERON:000099879.19silver quality
small intestineUBERON:000210873.31gold quality
jejunumUBERON:000211572.80gold quality
small intestine Peyer’s patchUBERON:000345470.45gold quality
cardia of stomachUBERON:000116269.25silver quality
ileal mucosaUBERON:000033169.08gold quality
body of stomachUBERON:000116167.42gold quality
stomachUBERON:000094566.77gold quality
fundus of stomachUBERON:000116065.12gold quality
amniotic fluidUBERON:000017364.36silver quality
lower lobe of lungUBERON:000894959.32silver quality
endometrium epitheliumUBERON:000481156.81gold quality
cauda epididymisUBERON:000436053.97silver quality
urinary bladderUBERON:000125553.69gold quality
pancreatic ductal cellCL:000207952.66silver quality
cerebellar vermisUBERON:000472051.73gold quality
Brodmann (1909) area 10UBERON:001354151.63gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 1.

ExperimentMarker?Max mean expression
E-ENAD-27no4.08
E-ANND-3no0.00

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): AR, CEBPA, CEBPG, ESR1, ESRRA, FOXC1, GATA1, GATA2, GATA6, HNF4A, MED1, NR1H4, NR1I2, NR1I3, NR5A1, PPARA, RORA, SF1, TBPL1, TCF3, VDR

miRNA regulators (miRDB)

34 targeting SULT2A1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-196A-5P100.0068.16684
HSA-MIR-196B-5P100.0068.16681
HSA-MIR-1193100.0065.93529
HSA-MIR-196A-1-3P99.9972.152772
HSA-MIR-477599.9875.006394
HSA-MIR-512-3P99.9767.351049
HSA-MIR-568899.9673.234504
HSA-MIR-495-3P99.9672.814197
HSA-MIR-590-3P99.9674.346478
HSA-MIR-6778-3P99.9667.292693
HSA-MIR-368699.9070.532432
HSA-MIR-320299.6667.702737
HSA-MIR-6832-5P99.5864.821132
HSA-MIR-4735-5P99.4368.491780
HSA-MIR-126499.2566.811317
HSA-MIR-7151-3P99.0469.722370
HSA-MIR-446498.9567.73820
HSA-MIR-474898.9567.53810
HSA-MIR-3145-3P98.8569.072031
HSA-MIR-314998.7767.131639
HSA-MIR-6501-3P98.7167.451480
HSA-MIR-2467-3P98.6567.181969
HSA-MIR-619-5P98.5764.971988
HSA-MIR-302F98.4469.021776
HSA-MIR-6773-3P98.1765.511213
HSA-MIR-4768-3P98.1666.022330
HSA-MIR-10395-3P98.1066.701726
HSA-MIR-4708-5P97.7767.82831
HSA-MIR-483-3P97.7764.95731
HSA-MIR-6509-5P97.3968.27969

Literature-anchored findings (GeneRIF, showing 40)

  • Crystal structure of human dehydroepiandrosterone sulphotransferase in complex with substrate (PMID:11988089)
  • Both steroidogenic factor 1 and GATA-6 were positive regulators of SULT2A1 promoter constructs (PMID:15388788)
  • lowered expression in hepatocellular carcinoma tissues involved in metabolism and/or inactivation of sex steroids is consistent with a regulatory role SULT2A1 in the development and/or tumor cell differentiation and progression of human HCC (PMID:15713538)
  • Estrogen receptor alphaeffects on SULT2A1 were greater than the stimulation seen in response to steroidogenic factor 1 (SF1). (PMID:15878968)
  • The SULT2A1 is the major endogenous enzyme responsible for sulfation of the tibolone metabolites in human postmenopausal tissues. (PMID:16360722)
  • the SULT2A1 gene is mediated by SF1 and indirectly regulated by T(3) (PMID:16469813)
  • No significant association of the presence of the different SULT2A1 alleles with the occurrence of prostate cancer in black men was detected. (PMID:16617014)
  • Methotrexate induction of hSULT2A1 is mediated through hCAR. (PMID:17276571)
  • genetic evidence suggesting a potential role of SULT2A1, but not STS, in the inherited adrenal androgen excess of polycystic ovary syndrome (PMID:17426092)
  • Two amino acids are identified and characterized for the substrate inhibition of SULT2A1. (PMID:18042734)
  • In cortices attached to adrenocortical adenomas, SULT2A1 mRNA expression was present mainly in zona reticularis and extended to zona fasciculata. (PMID:18505908)
  • Sulfation of polychlorinated phenols catalyzed by hSULT2A1 may be a significant component of their metabolism in humans. (PMID:18656962)
  • Testosterone and insulin appear to be modulators of adrenal androgen production in this human adrenocortical cell model. (PMID:18684447)
  • Demonstrate that hSULT2A1 is responsible for the N-sulfation of quinolones and possibly other therapeutic drugs in humans. (PMID:19420132)
  • The sulfation kinetics of dehydroepiandrosterone and 15 human bile acids by SULT2A1, was characterized. (PMID:20102295)
  • Hydroxysteroid sulfotransferase SULT2A1 is suppressed by the estrogen related receptor alpha (PMID:21513704)
  • Serum DHEAS levels are increased in patients with non-alcoholic fatty liver disease with elevated alanine aminotransferase levels. (PMID:21841322)
  • Common polymorphisms at POR, SULT2A1 or HSD11B1 were not associated with PA in a Finnish Caucasian population. (PMID:22445027)
  • Genetic variants of SULT2A1 do not appear to have an effect on individual DHEA and DHEAS concentrations or the DHEA/DHEAS ratio as a marker of DHEA sulfonation capacity (PMID:23132913)
  • SULT2A1 as a novel ROR-alpha and ROR-gamma target gene. (PMID:23211525)
  • The simulations predict that the active-site “cap,” which covers both the nucleotide and acceptor binding sites, opens and closes in response to nucleotide. (PMID:23256751)
  • A crystallographic and biochemical description of the molecular linkages that couple nucleotide binding and SULT2A1 isomerization. (PMID:23362278)
  • These data show an age-related association of polymorphisms in the SULT2A1 gene with lower dehydroepiandrosterone sulfate, suggesting that these polymorphisms may affect dehydroepiandrosterone sulfate concentration in adults. (PMID:23436881)
  • formation of disulfide bonds in hSULT2A1 is a potentially important reversible mechanism for alterations in the rates of sulfation of both endogenous and xenobiotic substrates (PMID:23444386)
  • Fetal inflammatory response syndrome and funisitis are associated with an elevation of umbilical cord plasma concentrations of soluble sulfotransferase (ST)2. (PMID:23488731)
  • Depression following hip fracture with poor long term recovery is associated with a higher serum cortisol:DHEAS ratio. (PMID:23773910)
  • Genetic variants in SULT2A1 do not predispose to polycystic ovary syndrome. Although a variant in SULT2A1 decreased the DHEAS to DHEA ratio, no changes in other androgenic hormone levels were observed. (PMID:23861462)
  • results established human SULT2A1 as a novel LXRalpha target gene; the expression of LXRalpha is a potential predictor for the expression of SULT2A1 in human liver (PMID:25028566)
  • The complete kinetic mechanism of human SULT2A1. (PMID:25056952)
  • It turns out the protective effect of DHEA was significantly decreased when Wnt/beta-catenin signaling was activated, while inactivating Wnt/beta-catenin signaling enhanced the effects of DHEA (PMID:25065588)
  • molecular dynamic simulations were used to investigate the effect of ligands (cofactor and substrate) on the thermo-denaturation process of hSULT2A1 (PMID:25750022)
  • Our results show that SULT2A1 is important in the first trimester; particularly in the adrenals (PMID:25802089)
  • The substrate, such as lithocholic acid (LCA), participated in regulating the structure and flexibility of sulfotransferase actively rather than merely being selected passively. (PMID:26149755)
  • It metabolizes breast cancer drugs like afinoxifene and endoxifen by sulfation. (PMID:26169578)
  • PSC is characterized by disease-specific impairment of SULT2A1 expression following PXR activation, a phenomenon which is not noted in PBC, and may account for the impaired hepatoprotection in PSC. (PMID:26504856)
  • Decreased SULT2A1 activity was found in the adrenal zona reticularis in Alzheimer’s disease patients. (PMID:26680489)
  • A theoretical study at the level of density functional theory (DFT) was performed to characterize noncovalent intermolecular interactions, especially hydrogen bond interactions, in the active site of enzyme human androsterone sulphotransferase. (PMID:27337388)
  • Polymorphisms of SULT2A1 gene is not associated with attention-deficit/hyperactivity disorder. (PMID:28367959)
  • Mass spectrometry analysis and structural modeling supported a reaction mechanism which involves the isomerization of Delta(4)-3-ketosteroids from the keto form to an enol form, prior to being subjected to sulfation. Results derived from this study suggested a potential role of SULT2A1 as a Delta(4)-3-ketosteroid sulfotransferase in steroid metabolism (PMID:28782626)
  • nine human SULT2A1 allozymes plus the wild-type SULT2A1 were found to display differential sulfating activity toward DHEA and tibolone. Kinetic analysis revealed that different SULT2A1 allozymes exhibited differential substrate affinity and catalytic efficiency toward the two substrates tested. (PMID:29392568)

Cross-species orthologs

25 orthologs

OrganismSymbolGene ID
danio_reriosult1st4ENSDARG00000003181
danio_reriosult1st3ENSDARG00000018361
danio_reriosult1st1ENSDARG00000028275
danio_reriosult2st3ENSDARG00000028367
danio_reriosult2st1ENSDARG00000033170
danio_reriosult1st2ENSDARG00000041540
danio_reriosult1st7ENSDARG00000079079
danio_reriosult1st9ENSDARG00000094996
danio_reriosult2st2ENSDARG00000103785
mus_musculusSult2a8ENSMUSG00000030378
mus_musculusSult2a6ENSMUSG00000070810
mus_musculusSult2a2ENSMUSG00000070811
mus_musculusSult2a3ENSMUSG00000074375
mus_musculusSult2a4ENSMUSG00000074377
mus_musculusSult2a1ENSMUSG00000078798
mus_musculusSult2a5ENSMUSG00000078799
mus_musculusSult2a7ENSMUSG00000094156
rattus_norvegicusSult2a2ENSRNOG00000047986
rattus_norvegicusSult2a2ENSRNOG00000062869
rattus_norvegicusLOC134485278ENSRNOG00000063815
rattus_norvegicusENSRNOG00000078002
rattus_norvegicusENSRNOG00000082374
drosophila_melanogasterSt4FBGN0033887
drosophila_melanogasterSt1FBGN0034887
drosophila_melanogasterSt3FBGN0265052

Paralogs (12): SULT2B1 (ENSG00000088002), SULT1E1 (ENSG00000109193), SULT4A1 (ENSG00000130540), SULT6B1 (ENSG00000138068), SULT1B1 (ENSG00000173597), SULT1C3 (ENSG00000196228), SULT1A1 (ENSG00000196502), SULT1A2 (ENSG00000197165), SULT1C4 (ENSG00000198075), SULT1C2 (ENSG00000198203), SULT1A4 (ENSG00000213648), SULT1A3 (ENSG00000261052)

Protein

Protein identifiers

Sulfotransferase 2A1Q06520 (reviewed: Q06520)

Alternative names: Bile salt sulfotransferase, Dehydroepiandrosterone sulfotransferase, Hydroxysteroid Sulfotransferase, ST2, SULT2A3

All UniProt accessions (2): Q06520, A8K015

UniProt curated annotations — full annotation on UniProt →

Function. Sulfotransferase that utilizes 3’-phospho-5’-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfonation of steroids and bile acids in the liver and adrenal glands. Mediates the sulfation of a wide range of steroids and sterols, including pregnenolone, androsterone, DHEA, bile acids, cholesterol and as well many xenobiotics that contain alcohol and phenol functional groups. Sulfonation increases the water solubility of most compounds, and therefore their renal excretion, but it can also result in bioactivation to form active metabolites. Plays an important role in maintening steroid and lipid homeostasis. Plays a key role in bile acid metabolism, mediating formation of 3-sulfated bile acids. In addition, catalyzes the metabolic activation of potent carcinogenic polycyclic arylmethanols.

Subunit / interactions. Homodimer.

Subcellular location. Cytoplasm.

Tissue specificity. Liver, adrenal and at lower level in the kidney. Is present in human fetus in higher level in the adrenal than the liver and the kidney.

Post-translational modifications. The N-terminus is blocked.

Activity regulation. Subject to substrate inhibition. Alternate orientations for binding of steroid substrates to SULT2A1 may play a role in substrate inhibition.

Similarity. Belongs to the sulfotransferase 1 family.

RefSeq proteins (1): NP_003158* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR000863Sulfotransferase_domDomain
IPR027417P-loop_NTPaseHomologous_superfamily

Pfam: PF00685

Catalyzed reactions (Rhea), 12 shown:

  • glycolithocholate + 3’-phosphoadenylyl sulfate = glycolithocholate 3-sulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:10908)
  • taurolithocholate + 3’-phosphoadenylyl sulfate = taurolithocholate 3-sulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:14013)
  • an alcohol + 3’-phosphoadenylyl sulfate = an alkyl sulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:22552)
  • lithocholate + 3’-phosphoadenylyl sulfate = lithocholate 3-sulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:51064)
  • 3beta-hydroxyandrost-5-en-17-one + 3’-phosphoadenylyl sulfate = dehydroepiandrosterone 3-sulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:51216)
  • (24S)-hydroxycholesterol + 3’-phosphoadenylyl sulfate = (24S)-hydroxycholesterol 24-sulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:52344)
  • (24S)-hydroxycholesterol + 3’-phosphoadenylyl sulfate = (24S)-hydroxycholesterol 3-sulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:52348)
  • (24S)-hydroxycholesterol 24-sulfate + 3’-phosphoadenylyl sulfate = (24S)-hydroxycholesterol 3,24-disulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:52352)
  • pregnenolone + 3’-phosphoadenylyl sulfate = pregnenolone sulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:52356)
  • androsterone + 3’-phosphoadenylyl sulfate = androsterone 3alpha-sulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:60644)
  • deoxycholate + 3’-phosphoadenylyl sulfate = deoxycholate 3-sulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:77203)
  • glycodeoxycholate + 3’-phosphoadenylyl sulfate = glycodeoxycholate 3-sulfate + adenosine 3’,5’-bisphosphate + H(+) (RHEA:77207)

UniProt features (66 total): helix 19, binding site 14, strand 10, sequence variant 9, mutagenesis site 5, sequence conflict 3, turn 3, chain 1, active site 1, modified residue 1

Structure

Experimental structures (PDB)

7 structures.

PDBMethodResolution (Å)
1J99X-RAY DIFFRACTION1.99
3F3YX-RAY DIFFRACTION2.2
4IFBX-RAY DIFFRACTION2.3
1EFHX-RAY DIFFRACTION2.4
2QP3X-RAY DIFFRACTION2.6
1OV4X-RAY DIFFRACTION2.7
2QP4X-RAY DIFFRACTION3

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-Q06520-F195.500.89

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Catalytic / active sites (1): 99 (proton acceptor)

Ligand- & substrate-binding residues (14): 184; 218; 223; 247; 248; 249; 44; 45; 46; 47; 48; 49

Post-translational modifications (1): 251

Mutagenesis-validated functional residues (5):

PositionPhenotype
137strongly reduces substrate inhibition when adt or dhea are used as substrates.
137substrate inhibition is completely eliminated for dhea; when associated with a-238.
238completely eliminates the substrate inhibition when adt is used as substrate. partially eliminates substrate inhibition
238strongly reduces substrate inhibition when adt or dhea are used as substrates.

Function

Pathways and Gene Ontology

Reactome pathways

9 pathways

IDPathway
R-HSA-156584Cytosolic sulfonation of small molecules
R-HSA-1989781PPARA activates gene expression
R-HSA-9753281Paracetamol ADME
R-HSA-1430728Metabolism
R-HSA-156580Phase II - Conjugation of compounds
R-HSA-211859Biological oxidations
R-HSA-400206Regulation of lipid metabolism by PPARalpha
R-HSA-556833Metabolism of lipids
R-HSA-9748784Drug ADME

MSigDB gene sets: 126 (showing top): GOBP_PHENOL_CONTAINING_COMPOUND_METABOLIC_PROCESS, REACTOME_BIOLOGICAL_OXIDATIONS, GOBP_REGULATION_OF_HORMONE_LEVELS, GOBP_THYROID_HORMONE_METABOLIC_PROCESS, GOBP_ORGANOPHOSPHATE_METABOLIC_PROCESS, CERVERA_SDHB_TARGETS_1_DN, TAL1ALPHAE47_01, GOBP_SULFATION, GOBP_MONOCARBOXYLIC_ACID_METABOLIC_PROCESS, GOBP_CARBOHYDRATE_DERIVATIVE_METABOLIC_PROCESS, GOBP_NUCLEOBASE_CONTAINING_SMALL_MOLECULE_METABOLIC_PROCESS, WEI_MYCN_TARGETS_WITH_E_BOX, TCF4_Q5, HOSHIDA_LIVER_CANCER_SUBCLASS_S3, NF1_Q6_01

GO Biological Process (12): ethanol catabolic process (GO:0006068), xenobiotic metabolic process (GO:0006805), steroid metabolic process (GO:0008202), cholesterol metabolic process (GO:0008203), bile acid metabolic process (GO:0008206), lipid catabolic process (GO:0016042), bile acid catabolic process (GO:0030573), thyroid hormone metabolic process (GO:0042403), 3’-phosphoadenosine 5’-phosphosulfate metabolic process (GO:0050427), sulfation (GO:0051923), sensory perception of itch (GO:0160025), lipid metabolic process (GO:0006629)

GO Molecular Function (7): alcohol sulfotransferase activity (GO:0004027), sulfotransferase activity (GO:0008146), bile-salt sulfotransferase activity (GO:0047704), steroid sulfotransferase activity (GO:0050294), 3’-phosphoadenosine 5’-phosphosulfate binding (GO:0050656), protein binding (GO:0005515), transferase activity (GO:0016740)

GO Cellular Component (2): cytoplasm (GO:0005737), cytosol (GO:0005829)

Reactome top-level categories

Rollup of top-6 pathways:

CategoryPathways
Metabolism2
Phase II - Conjugation of compounds1
Regulation of lipid metabolism by PPARalpha1
Drug ADME1
Biological oxidations1
Metabolism of lipids1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
sulfotransferase activity3
lipid metabolic process2
sulfur compound metabolic process2
cellular anatomical structure2
ethanol metabolic process1
primary alcohol catabolic process1
metabolic process1
cellular response to xenobiotic stimulus1
sterol metabolic process1
secondary alcohol metabolic process1
steroid metabolic process1
monocarboxylic acid metabolic process1
catabolic process1
bile acid metabolic process1
monocarboxylic acid catabolic process1
modified amino acid metabolic process1
phenol-containing compound metabolic process1
hormone metabolic process1
purine ribonucleotide metabolic process1
purine ribonucleoside bisphosphate metabolic process1
oxoacid metabolic process1
sensory perception1
primary metabolic process1
transferase activity, transferring sulphur-containing groups1
adenyl ribonucleotide binding1
anion binding1
sulfur compound binding1
binding1
catalytic activity1
intracellular anatomical structure1
cytoplasm1

Protein interactions and networks

STRING

1098 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
SULT2A1HRCP23327817
SULT2A1CYP11A1P05108809
SULT2A1UGT1A8Q9HAW9776
SULT2A1CYP17A1P05093770
SULT2A1PAPSS2O95340765
SULT2A1SRD5A1P18405749
SULT2A1HSD3B2P26439736
SULT2A1UGT2B4P06133734
SULT2A1HSD3B1P14060717
SULT2A1SRD5A2P31213703
SULT2A1UGT1A1P22309673
SULT2A1UGT1A4P22310673
SULT2A1NR1I2O75469672
SULT2A1UGT1A6P19224666
SULT2A1UGT1A10Q9HAW8656

IntAct

15 interactions, top by confidence:

ABTypeScore
SULT1B1SULT2A1psi-mi:“MI:0915”(physical association)0.720
SULT2A1NIF3L1psi-mi:“MI:0915”(physical association)0.560
SULT2A1STAT3psi-mi:“MI:0915”(physical association)0.510
STAT3SULT2A1psi-mi:“MI:0915”(physical association)0.510
TMX1SULT2A1psi-mi:“MI:0915”(physical association)0.370
STK3SULT2A1psi-mi:“MI:0915”(physical association)0.370
SULT2A1PRDX4psi-mi:“MI:0915”(physical association)0.370
SULT2A1SULT1B1psi-mi:“MI:0915”(physical association)0.000
SULT2A1NIF3L1psi-mi:“MI:0915”(physical association)0.000

BioGRID (14): SULT1B1 (Two-hybrid), SULT1B1 (Two-hybrid), NIF3L1 (Two-hybrid), SULT2A1 (Affinity Capture-MS), SULT2A1 (Affinity Capture-MS), SULT2A1 (Negative Genetic), SULT2A1 (Negative Genetic), SULT2A1 (Cross-Linking-MS (XL-MS)), SULT2A1 (Affinity Capture-MS), SULT2A1 (Affinity Capture-Western), TMX1 (Two-hybrid), SULT2A1 (Two-hybrid), SULT2A1 (Two-hybrid), SULT2A1 (Two-hybrid)

ESM2 similar proteins: A0A173GP47, A0A1L8HV70, A0A2K5X3B6, B2RVI8, F1QYJ6, G3V9R3, O00338, O43704, O46503, O75897, P0CC03, P15709, P17988, P19217, P22789, P27707, P46560, P48769, P49887, P49888, P49891, P50234, P50235, P50236, P50237, P52840, P52841, P52843, P52844, P52847, Q06520, Q3T0Y3, Q3UZZ6, Q5ZJM7, Q6IMI4, Q6IMI6, Q6PH37, Q6WG17, Q6WG18, Q7T2V2

Diamond homologs: A0A173GP47, A0A2K5X3B6, B2RVI8, F1QYJ6, G3V9R3, O00204, O00338, O35400, O35403, O43704, O46503, O46640, O75897, P0CC03, P0DMM9, P0DMN0, P15709, P17988, P19217, P22789, P49887, P49888, P49891, P50225, P50226, P50227, P50234, P50235, P50236, P50237, P52835, P52836, P52837, P52838, P52840, P52841, P52842, P52843, P52844, P52846

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

37 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic0
Uncertain significance25
Likely benign4
Benign2

Top pathogenic / likely-pathogenic (0)

SpliceAI

726 predictions. Top by Δscore:

VariantEffectΔscore
19:47871563:TACAC:Tacceptor_gain1.0000
19:47871564:ACAC:Aacceptor_gain1.0000
19:47871565:CAC:Cacceptor_gain1.0000
19:47871565:CACC:Cacceptor_gain1.0000
19:47871567:CCTGG:Cacceptor_loss1.0000
19:47871568:C:CCacceptor_gain1.0000
19:47871568:CTGG:Cacceptor_loss1.0000
19:47871569:T:Cacceptor_loss1.0000
19:47871575:C:CTacceptor_gain1.0000
19:47871576:A:Tacceptor_gain1.0000
19:47874651:TTTTA:Tdonor_loss1.0000
19:47874652:TTTAC:Tdonor_loss1.0000
19:47874653:TTACC:Tdonor_loss1.0000
19:47874654:TA:Tdonor_loss1.0000
19:47874655:A:Tdonor_loss1.0000
19:47874833:TC:Tacceptor_gain1.0000
19:47874834:CC:Cacceptor_gain1.0000
19:47874835:C:CAacceptor_loss1.0000
19:47874835:C:CCacceptor_gain1.0000
19:47879131:C:CCacceptor_gain1.0000
19:47883650:T:Adonor_gain1.0000
19:47886271:T:TAdonor_gain1.0000
19:47871566:AC:Aacceptor_gain0.9900
19:47871567:CC:Cacceptor_gain0.9900
19:47874830:GTGTC:Gacceptor_gain0.9900
19:47874831:TGTC:Tacceptor_gain0.9900
19:47874835:C:Tacceptor_gain0.9900
19:47879126:TAGCA:Tacceptor_gain0.9900
19:47879129:CA:Cacceptor_gain0.9900
19:47882208:CACCT:Cacceptor_gain0.9900

AlphaMissense

1905 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
19:47886127:T:AK44I0.990
19:47886126:T:AK44N0.985
19:47886126:T:GK44N0.985
19:47874799:G:CF201L0.979
19:47874799:G:TF201L0.979
19:47874801:A:GF201L0.979
19:47879116:A:GW163R0.979
19:47879116:A:TW163R0.979
19:47879095:A:GW170R0.978
19:47879095:A:TW170R0.978
19:47883785:C:AG46V0.978
19:47882193:T:AR121S0.975
19:47882193:T:GR121S0.975
19:47883785:C:TG46E0.972
19:47882194:C:GR121T0.970
19:47886152:C:GD36H0.970
19:47874661:T:AR247S0.969
19:47874661:T:GR247S0.969
19:47883627:G:CH99D0.968
19:47883701:C:GR74P0.968
19:47874748:G:CS218R0.967
19:47874748:G:TS218R0.967
19:47874750:T:GS218R0.967
19:47871553:A:GW254R0.966
19:47871553:A:TW254R0.966
19:47886136:G:AT41I0.966
19:47886125:A:GS45P0.963
19:47882097:A:CF153L0.961
19:47882097:A:TF153L0.961
19:47882099:A:GF153L0.961

dbSNP variants (sampled 300 via entrez): RS1000045453 (19:47883203 G>A,C), RS1000404199 (19:47878037 C>T), RS1000780722 (19:47872657 AAC>A), RS1000823724 (19:47876546 G>C,T), RS1001131665 (19:47887902 T>C), RS1001178769 (19:47881363 G>A), RS1001240271 (19:47882787 C>G,T), RS1001463914 (19:47886782 T>C), RS1001671424 (19:47871445 G>A,C), RS1001711913 (19:47881092 G>A), RS1002008202 (19:47870112 G>C,T), RS1002221302 (19:47874900 G>A), RS1002395070 (19:47881701 A>G), RS1002444296 (19:47875507 G>A), RS1002505929 (19:47874074 A>G)

Disease associations

OMIM: gene MIM:125263 | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

21 associations (top):

StudyTraitp-value
GCST001038_5Dehydroepiandrosterone sulphate levels3.000000e-19
GCST002925_13Sex hormone levels2.000000e-06
GCST003725_6Gallstone disease1.000000e-07
GCST006249_69Serum metabolite levels2.000000e-26
GCST006249_73Serum metabolite levels2.000000e-43
GCST006585_963Blood protein levels2.000000e-27
GCST007209_23Gallstone disease2.000000e-31
GCST007509_3Cleft palate8.000000e-08
GCST009364_29Triglyceride levels x long total sleep time interaction (2df test)3.000000e-10
GCST009733_238Urinary metabolite levels in chronic kidney disease2.000000e-11
GCST009733_98Urinary metabolite levels in chronic kidney disease5.000000e-26
GCST010241_313Apolipoprotein A1 levels2.000000e-08
GCST010244_369Triglyceride levels5.000000e-11
GCST012020_539Serum metabolite levels4.000000e-11
GCST012020_540Serum metabolite levels6.000000e-20
GCST012020_541Serum metabolite levels3.000000e-25
GCST012020_542Serum metabolite levels2.000000e-34
GCST012020_543Serum metabolite levels6.000000e-35
GCST90013406_144Liver enzyme levels (alkaline phosphatase)3.000000e-20
GCST90020091_12Estradiol levels2.000000e-10
GCST90093092_6DHEAS levels6.000000e-06

EFO canonical traits (7, from GWAS)

EFO IDTrait name
EFO:0004730hormone measurement
EFO:0007001dehydroepiandrosterone sulphate measurement
EFO:0004530triglyceride measurement
EFO:0005116urinary metabolite measurement
EFO:0004614apolipoprotein A 1 measurement
EFO:0004533alkaline phosphatase measurement
EFO:0004697estradiol measurement

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL2077 (SINGLE PROTEIN)

PharmGKB: 1 entry (VIP=true, CPIC=false)

ChEMBL bioactivities

2 potent at pChembl≥5 of 2 total, top 2 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
7.30IC5050nMCHEMBL1552719
6.00IC501010nMCHEMBL2325503

PubChem BioAssay actives

2 with measured affinity, of 6 total; 2 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
5-[[4-(4-methoxyphenyl)-5-pyridin-4-yl-1,2,4-triazol-3-yl]sulfanylmethyl]-3-(4-methylphenyl)-1,2,4-oxadiazole1924281: Inhibition of ST (unknown origin)ic500.0500uM
4-[5-[(E)-2-[4-(2-chlorophenyl)-5-(5-methylsulfonyl-2-pyridinyl)-1,2,4-triazol-3-yl]ethenyl]-1,3,4-oxadiazol-2-yl]benzonitrile1924281: Inhibition of ST (unknown origin)ic501.0100uM

CTD chemical–gene interactions

133 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Dehydroepiandrosteroneincreases sulfation, affects metabolic processing, affects reaction, affects binding, increases metabolic processing (+2 more)10
Cyclosporineincreases abundance, affects cotreatment, decreases expression, decreases activity7
Chenodeoxycholic Acidaffects cotreatment, decreases expression, increases sulfation5
bisphenol Aincreases response to substance, affects expression, decreases expression, increases methylation, increases metabolic processing4
Acetaminophenaffects cotreatment, decreases expression, increases expression, decreases reaction4
Lithocholic Aciddecreases activity, increases abundance, increases sulfation4
Tetrachlorodibenzodioxinincreases reaction, affects expression, affects cotreatment, decreases expression, increases expression4
Aflatoxin B1affects expression, affects cotreatment, increases expression, decreases expression4
Benzo(a)pyreneaffects methylation, decreases expression, increases expression, increases methylation3
Deoxycholic Acidaffects cotreatment, decreases expression3
Glycochenodeoxycholic Aciddecreases expression, affects cotreatment3
Glycocholic Acidaffects cotreatment, decreases expression3
Glycodeoxycholic Acidaffects cotreatment, decreases expression3
Methotrexatedecreases expression, decreases reaction, increases activity, increases expression3
Triclosanaffects cotreatment, decreases expression3
tris(1,3-dichloro-2-propyl)phosphatedecreases expression2
perfluorooctanoic aciddecreases expression, increases expression2
2,5-dichlorobiphenylaffects metabolic processing, decreases reaction, increases sulfation2
perfluorooctane sulfonic aciddecreases expression, increases expression2
perfluoro-n-nonanoic aciddecreases expression, increases expression2
Celecoxibaffects reaction, affects sulfation, affects activity, affects cotreatment2
Bile Acids and Saltsincreases sulfation2
Ethinyl Estradiolaffects cotreatment, affects reaction, affects sulfation, affects metabolic processing, increases metabolic processing2
Colforsindecreases expression, increases reaction2
Hydrogen Peroxideincreases expression, affects expression2
Oxygenaffects expression, decreases reaction, increases expression, increases reaction, affects cotreatment (+1 more)2
Polychlorinated Biphenylsincreases sulfation, affects metabolic processing, decreases reaction2
Quercetinaffects cotreatment, decreases expression2
Tartrazineaffects cotreatment, decreases expression2
fluorotelomer sulfonic acidsincreases expression1

ChEMBL screening assays

8 unique, capped per target: 5 binding, 3 admet

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL1743310ADMETMajor substrate of human cytosolic sulfotransferase SULT2A1Casarett and Doull’s Toxicology The Basic Science of Poisons, 7th edition
CHEMBL4482701BindingSubstrate activity at SULT2A1 (unknown origin) expressed in baculovirus infected Sf9 cells assessed as substrate Km incubated for 15 mins using [35S-]PAPS as sulfate donor by TLC analysisIn vivo imaging of sulfotransferases

Cellosaurus cell lines

1 cell lines: 1 spontaneously immortalized cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_A2GVV79-hSULT2A1Spontaneously immortalized cell lineMale

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.

  • Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): gallstones