SUV39H2-DT

Summary

SUV39H2-DT (SUV39H2 divergent transcript, HGNC:55188) is a long non-coding RNA gene on chromosome 10p13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55188
Approved symbol	SUV39H2-DT
Name	SUV39H2 divergent transcript
Location	10p13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000272853
Ensembl biotype	lncRNA
Entrez	124902382
RNAcentral	URS00026A2531 — lncRNA, 579 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000609399, ENST00000731019, ENST00000731020, ENST00000731021, ENST00000731022, ENST00000731023, ENST00000731024

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000609399 — 1 exons

Exon	Start	End
ENSE00004060076	14877238	14878728

Expression profiles

Bgee: expression breadth ubiquitous, 130 present calls, max score 82.91.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 2.3885 / max 42.4118, expressed in 1325 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
108400	2.2914	1301
108401	0.0971	24

Top tissues by expression

130 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	82.91	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.14	gold quality
pituitary gland	UBERON:0000007	71.19	gold quality
adenohypophysis	UBERON:0002196	70.59	gold quality
cortical plate	UBERON:0005343	68.06	gold quality
left testis	UBERON:0004533	67.66	gold quality
testis	UBERON:0000473	67.27	gold quality
right testis	UBERON:0004534	67.03	gold quality
stromal cell of endometrium	CL:0002255	66.34	gold quality
nucleus accumbens	UBERON:0001882	66.12	gold quality
right hemisphere of cerebellum	UBERON:0014890	66.00	gold quality
hypothalamus	UBERON:0001898	65.33	gold quality
prostate gland	UBERON:0002367	65.18	gold quality
cerebellar hemisphere	UBERON:0002245	65.14	gold quality
cerebellar cortex	UBERON:0002129	65.12	gold quality
cerebellum	UBERON:0002037	65.11	gold quality
brain	UBERON:0000955	64.89	gold quality
right uterine tube	UBERON:0001302	64.79	gold quality
mucosa of transverse colon	UBERON:0004991	64.73	gold quality
prefrontal cortex	UBERON:0000451	64.51	gold quality
Brodmann (1909) area 9	UBERON:0013540	64.44	gold quality
anterior cingulate cortex	UBERON:0009835	64.35	gold quality
substantia nigra	UBERON:0002038	64.20	gold quality
thyroid gland	UBERON:0002046	64.19	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	64.18	gold quality
left lobe of thyroid gland	UBERON:0001120	64.17	gold quality
putamen	UBERON:0001874	64.09	gold quality
frontal cortex	UBERON:0001870	64.05	gold quality
ganglionic eminence	UBERON:0004023	64.05	gold quality
right coronary artery	UBERON:0001625	63.98	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.34

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.