SV2C-AS2

Summary

SV2C-AS2 (SV2C antisense RNA 2, HGNC:58251) is a long non-coding RNA gene on chromosome 5q13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58251
Approved symbol	SV2C-AS2
Name	SV2C antisense RNA 2
Location	5q13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000250348
Ensembl biotype	lncRNA
Entrez	105379042
RNAcentral	URS0002A2C202 — lncRNA, 1306 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000502589, ENST00000784363

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000502589 — 4 exons

Exon	Start	End
ENSE00002020664	76311184	76311462
ENSE00002495332	76286707	76286803
ENSE00004159021	76285523	76285921
ENSE00004159023	76336321	76336851

Expression profiles

Bgee: expression breadth broad, 73 present calls, max score 78.78.

Top tissues by expression

73 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
monocyte	CL:0000576	78.78	gold quality
leukocyte	CL:0000738	77.49	gold quality
sural nerve	UBERON:0015488	65.78	gold quality
granulocyte	CL:0000094	64.16	gold quality
blood	UBERON:0000178	58.63	gold quality
lymph node	UBERON:0000029	55.11	gold quality
bone marrow	UBERON:0002371	54.39	gold quality
placenta	UBERON:0001987	51.62	gold quality
prefrontal cortex	UBERON:0000451	50.49	gold quality
calcaneal tendon	UBERON:0003701	50.42	silver quality
multicellular organism	UBERON:0000468	50.28	gold quality
liver	UBERON:0002107	48.79	silver quality
islet of Langerhans	UBERON:0000006	48.39	gold quality
left coronary artery	UBERON:0001626	47.27	gold quality
endometrium	UBERON:0001295	45.95	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	45.20	gold quality
lower esophagus muscularis layer	UBERON:0035833	45.17	gold quality
ascending aorta	UBERON:0001496	45.15	gold quality
esophagus	UBERON:0001043	45.06	gold quality
esophagus mucosa	UBERON:0002469	44.62	gold quality
thoracic aorta	UBERON:0001515	44.51	gold quality
right lobe of liver	UBERON:0001114	44.36	silver quality
tibial nerve	UBERON:0001323	44.35	gold quality
spleen	UBERON:0002106	44.17	silver quality
heart	UBERON:0000948	43.28	gold quality
lung	UBERON:0002048	43.13	gold quality
saliva-secreting gland	UBERON:0001044	42.90	gold quality
upper lobe of left lung	UBERON:0008952	42.85	gold quality
stomach	UBERON:0000945	42.75	silver quality
body of uterus	UBERON:0009853	42.63	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.14

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.