SYMPK-AS1

Summary

SYMPK-AS1 (SYMPK antisense RNA 1, HGNC:58331) is a long non-coding RNA gene on chromosome 19q13.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58331
Approved symbol	SYMPK-AS1
Name	SYMPK antisense RNA 1
Location	19q13.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000269148
Ensembl biotype	lncRNA
Entrez	139637959

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000601618

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000601618 — 2 exons

Exon	Start	End
ENSE00003178358	45830164	45830786
ENSE00003219213	45830968	45831108

Expression profiles

Bgee: expression breadth ubiquitous, 131 present calls, max score 78.25.

Top tissues by expression

131 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	78.25	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.21	gold quality
ventricular zone	UBERON:0003053	67.03	gold quality
granulocyte	CL:0000094	66.77	gold quality
bone marrow cell	CL:0002092	66.03	silver quality
cortical plate	UBERON:0005343	64.43	gold quality
colonic epithelium	UBERON:0000397	61.42	silver quality
stromal cell of endometrium	CL:0002255	61.26	gold quality
ganglionic eminence	UBERON:0004023	61.17	gold quality
bone marrow	UBERON:0002371	61.15	gold quality
spleen	UBERON:0002106	61.08	gold quality
blood	UBERON:0000178	60.84	gold quality
mucosa of stomach	UBERON:0001199	60.48	gold quality
liver	UBERON:0002107	60.04	gold quality
body of stomach	UBERON:0001161	59.98	gold quality
right lobe of thyroid gland	UBERON:0001119	59.94	gold quality
left adrenal gland cortex	UBERON:0035825	59.87	gold quality
left lobe of thyroid gland	UBERON:0001120	59.83	gold quality
left adrenal gland	UBERON:0001234	59.64	gold quality
tonsil	UBERON:0002372	59.57	gold quality
thyroid gland	UBERON:0002046	59.36	gold quality
right adrenal gland cortex	UBERON:0035827	59.34	gold quality
duodenum	UBERON:0002114	59.32	gold quality
right lobe of liver	UBERON:0001114	59.31	gold quality
metanephros cortex	UBERON:0010533	59.05	gold quality
leukocyte	CL:0000738	58.95	gold quality
small intestine Peyer’s patch	UBERON:0003454	58.93	gold quality
adrenal gland	UBERON:0002369	58.91	gold quality
small intestine	UBERON:0002108	58.72	gold quality
monocyte	CL:0000576	58.71	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.36

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.