SYPL1
gene geneOn this page
Summary
SYPL1 (synaptophysin like 1, HGNC:11507) is a protein-coding gene on chromosome 7q22.3, encoding Synaptophysin-like protein 1 (Q16563).
Predicted to be involved in chemical synaptic transmission. Located in extracellular exosome.
Source: NCBI Gene 6856 — RefSeq curated summary.
At a glance
- Clinical variants (ClinVar): 44 total
- Druggable target: yes
- MANE Select transcript:
NM_182715
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:11507 |
| Approved symbol | SYPL1 |
| Name | synaptophysin like 1 |
| Location | 7q22.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000008282 |
| Ensembl biotype | protein_coding |
| OMIM | 616665 |
| Entrez | 6856 |
Gene structure
Transcript identifiers
Ensembl transcripts: 11 — 7 protein_coding, 2 retained_intron, 2 nonsense_mediated_decay
ENST00000011473, ENST00000455385, ENST00000460770, ENST00000464029, ENST00000470347, ENST00000483448, ENST00000634737, ENST00000706297, ENST00000706298, ENST00000706299, ENST00000895750
RefSeq mRNA: 11 — MANE Select: NM_182715
NM_001381910, NM_001381911, NM_001381912, NM_001381913, NM_001381917, NM_001381918, NM_001381919, NM_001381920, NM_001381921, NM_006754, NM_182715
CCDS: CCDS47685, CCDS5736, CCDS94173, CCDS94174, CCDS94175
Canonical transcript exons
ENST00000455385 — 5 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000714603 | 106099158 | 106099282 |
| ENSE00000714609 | 106097690 | 106097897 |
| ENSE00000714615 | 106092949 | 106093137 |
| ENSE00001666890 | 106112140 | 106112312 |
| ENSE00001946984 | 106090505 | 106091939 |
Expression profiles
Bgee: expression breadth ubiquitous, 301 present calls, max score 99.12.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 58.4089 / max 376.7165, expressed in 1820 samples.
FANTOM5 promoters (4 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 85465 | 56.6209 | 1818 |
| 85467 | 0.7910 | 361 |
| 85464 | 0.6062 | 334 |
| 85466 | 0.3909 | 171 |
Top tissues by expression
302 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| epithelium of nasopharynx | UBERON:0001951 | 99.12 | gold quality |
| nasopharynx | UBERON:0001728 | 99.10 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 99.08 | gold quality |
| endometrium epithelium | UBERON:0004811 | 99.05 | gold quality |
| epithelium of esophagus | UBERON:0001976 | 98.75 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 98.64 | gold quality |
| adult organism | UBERON:0007023 | 98.56 | gold quality |
| germinal epithelium of ovary | UBERON:0001304 | 98.52 | gold quality |
| spinal cord | UBERON:0002240 | 98.50 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 98.37 | gold quality |
| esophagus mucosa | UBERON:0002469 | 98.32 | gold quality |
| tongue squamous epithelium | UBERON:0006919 | 98.10 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 98.00 | gold quality |
| parotid gland | UBERON:0001831 | 97.96 | gold quality |
| gingival epithelium | UBERON:0001949 | 97.94 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 97.93 | gold quality |
| squamous epithelium | UBERON:0006914 | 97.93 | gold quality |
| gingiva | UBERON:0001828 | 97.86 | gold quality |
| minor salivary gland | UBERON:0001830 | 97.84 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 97.81 | gold quality |
| mouth mucosa | UBERON:0003729 | 97.80 | gold quality |
| pharyngeal mucosa | UBERON:0000355 | 97.76 | gold quality |
| oral cavity | UBERON:0000167 | 97.72 | gold quality |
| vagina | UBERON:0000996 | 97.70 | gold quality |
| tonsil | UBERON:0002372 | 97.70 | gold quality |
| ectocervix | UBERON:0012249 | 97.68 | gold quality |
| esophagus | UBERON:0001043 | 97.62 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 97.61 | gold quality |
| gall bladder | UBERON:0002110 | 97.56 | gold quality |
| body of uterus | UBERON:0009853 | 97.50 | gold quality |
Single-cell (SCXA)
Detected in 6 experiment(s), a significant marker in 5.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-180759 | yes | 421.27 |
| E-HCAD-4 | yes | 75.93 |
| E-MTAB-10042 | yes | 10.84 |
| E-CURD-46 | yes | 9.33 |
| E-HCAD-6 | no | 28.66 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Literature-anchored findings (GeneRIF, showing 4)
- A role is found for synaptophysin I in the enduring neuroplasticity in the prefrontal cortical glutamate circuitry that is associated with ethanol dependence. (PMID:18720419)
- SYPL1 overexpression predicts poor prognosis of HCC. (PMID:28731154)
- Serum SYPL1 is a promising diagnostic biomarker for colorectal cancer. (PMID:32502495)
- Evaluation of fecal SYPL1 as a diagnostic biomarker in colorectal cancer. (PMID:35218739)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | sypl1 | ENSDARG00000077356 |
| mus_musculus | Sypl1 | ENSMUSG00000020570 |
| rattus_norvegicus | Sypl1 | ENSRNOG00000009856 |
| caenorhabditis_elegans | WBGENE00004979 |
Paralogs (3): SYP (ENSG00000102003), SYPL2 (ENSG00000143028), SYNPR (ENSG00000163630)
Protein
Protein identifiers
Synaptophysin-like protein 1 — Q16563 (reviewed: Q16563)
Alternative names: Pantophysin
All UniProt accessions (8): Q16563, A0A0U1RQT9, A0A994J5J4, A0A994J5W6, A0A994J846, A4D0R1, C9JYN0, H7C4J8
UniProt curated annotations — full annotation on UniProt →
Subcellular location. Cytoplasmic vesicle membrane. Melanosome.
Similarity. Belongs to the synaptophysin/synaptobrevin family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q16563-1 | 1 | yes |
| Q16563-2 | 2 |
RefSeq proteins (11): NP_001368839, NP_001368840, NP_001368841, NP_001368842, NP_001368846, NP_001368847, NP_001368848, NP_001368849, NP_001368850, NP_006745, NP_874384* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001285 | Synaptophysin/porin | Family |
| IPR008253 | Marvel | Domain |
Pfam: PF01284
UniProt features (17 total): topological domain 5, transmembrane region 4, glycosylation site 2, sequence conflict 2, chain 1, domain 1, splice variant 1, initiator methionine 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q16563-F1 | 83.01 | 0.49 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Glycosylation sites (2): 71, 212
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 306 (showing top):
MORF_MBD4, MORF_RAB5A, TGCTGCT_MIR15A_MIR16_MIR15B_MIR195_MIR424_MIR497, GOCC_SECRETORY_GRANULE, CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN, ROVERSI_GLIOMA_COPY_NUMBER_UP, MORF_HDAC1, MORF_RAD21, MORF_PSMC2, GOBP_CELL_CELL_SIGNALING, GOLDRATH_ANTIGEN_RESPONSE, PATIL_LIVER_CANCER, GTGCCTT_MIR506, MORF_SKP1A, MODULE_239
GO Biological Process (1): chemical synaptic transmission (GO:0007268)
GO Molecular Function (1): protein binding (GO:0005515)
GO Cellular Component (9): plasma membrane (GO:0005886), membrane (GO:0016020), secretory granule (GO:0030141), synaptic vesicle membrane (GO:0030672), melanosome (GO:0042470), extracellular exosome (GO:0070062), synaptic vesicle (GO:0008021), cytoplasmic vesicle membrane (GO:0030659), cytoplasmic vesicle (GO:0031410)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| anterograde trans-synaptic signaling | 1 |
| binding | 1 |
| membrane | 1 |
| cell periphery | 1 |
| cellular anatomical structure | 1 |
| endomembrane system | 1 |
| secretory vesicle | 1 |
| synaptic vesicle | 1 |
| exocytic vesicle membrane | 1 |
| pigment granule | 1 |
| extracellular vesicle | 1 |
| exocytic vesicle | 1 |
| presynapse | 1 |
| vesicle membrane | 1 |
| cytoplasmic vesicle | 1 |
| cytoplasm | 1 |
| intracellular vesicle | 1 |
Protein interactions and networks
STRING
748 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| SYPL1 | GTF2F1 | P35269 | 646 |
| SYPL1 | GRIP2 | Q9C0E4 | 639 |
| SYPL1 | MYO9B | Q13459 | 525 |
| SYPL1 | RUSC2 | Q8N2Y8 | 489 |
| SYPL1 | AKAP6 | Q13023 | 477 |
| SYPL1 | ZNF668 | Q96K58 | 474 |
| SYPL1 | RABGAP1 | Q9Y3P9 | 474 |
| SYPL1 | COPZ1 | P61923 | 440 |
| SYPL1 | GFAP | P14136 | 433 |
| SYPL1 | PTPN2 | P17706 | 427 |
| SYPL1 | CTXN1 | P60606 | 413 |
| SYPL1 | MOB1A | Q9H8S9 | 410 |
| SYPL1 | EEF1A1 | P04719 | 405 |
| SYPL1 | MAP1B | P46821 | 387 |
| SYPL1 | TUBGCP2 | Q9BSJ2 | 382 |
IntAct
52 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| SLC17A5 | LGALS8 | psi-mi:“MI:0914”(association) | 0.640 |
| ALG3 | SYPL1 | psi-mi:“MI:0915”(physical association) | 0.580 |
| PBX3 | SYPL1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| SDCBP | SYPL1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| SYPL1 | CIB3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| SYPL1 | ARFGAP3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| SYPL1 | RBFA | psi-mi:“MI:0915”(physical association) | 0.560 |
| SYPL1 | TEX44 | psi-mi:“MI:0915”(physical association) | 0.560 |
| SYPL1 | TARS2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| SYPL1 | PBX3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| PPIF | SYPL1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MCAM | LGALS8 | psi-mi:“MI:0914”(association) | 0.530 |
| HSCB | RBP5 | psi-mi:“MI:0914”(association) | 0.350 |
| TEX101 | PSMD12 | psi-mi:“MI:0914”(association) | 0.350 |
| TEX101 | NDUFA4 | psi-mi:“MI:0914”(association) | 0.350 |
| TMEM223 | psi-mi:“MI:0914”(association) | 0.350 | |
| NCAPD3 | NDUFS8 | psi-mi:“MI:0914”(association) | 0.350 |
| NPC1 | psi-mi:“MI:0914”(association) | 0.350 | |
| CANX | HLA-A | psi-mi:“MI:0914”(association) | 0.350 |
| VAMP2 | SNAP23 | psi-mi:“MI:0914”(association) | 0.350 |
| VAMP3 | SCAMP1 | psi-mi:“MI:0914”(association) | 0.350 |
| SYPL1 | LGALS3 | psi-mi:“MI:0914”(association) | 0.350 |
| AFG2B | MMP24OS | psi-mi:“MI:0914”(association) | 0.350 |
| MFSD8 | STXBP3 | psi-mi:“MI:0914”(association) | 0.350 |
| SLC16A10 | STXBP3 | psi-mi:“MI:0914”(association) | 0.350 |
| SLC19A1 | TAPBP | psi-mi:“MI:0914”(association) | 0.350 |
| SLC19A3 | SNAP23 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (60): SYPL1 (Synthetic Lethality), VAMP8 (Affinity Capture-MS), VAMP3 (Affinity Capture-MS), VAMP2 (Affinity Capture-MS), LGALS3 (Affinity Capture-MS), SYPL1 (Affinity Capture-MS), SYPL1 (Two-hybrid), SYPL1 (Affinity Capture-MS), SYPL1 (Synthetic Lethality), TOMM22 (Co-fractionation), SYPL1 (Affinity Capture-MS), RBFA (Two-hybrid), PPIF (Two-hybrid), SDCBP (Two-hybrid), CIB3 (Two-hybrid)
ESM2 similar proteins: A2VE13, A4K2N5, A4K2W1, B8BPI2, E1BY51, O09117, O09198, O35682, O62646, O88662, O89104, P21145, Q04941, Q10EJ2, Q16563, Q1RMQ3, Q28296, Q3URJ8, Q3ZBY0, Q5R6H1, Q5RAI2, Q5VXT5, Q64349, Q6DHB5, Q6GPN9, Q6P0C6, Q6P742, Q6VBQ5, Q6Y1E2, Q78S06, Q86TG1, Q86UW1, Q8BI08, Q8CJ61, Q8IZ96, Q8IZR5, Q8N2H4, Q8N8D7, Q91WN2, Q95MN6
Diamond homologs: O09117, O62646, O89104, P07825, P08247, P20488, P22831, Q16563, Q5VXT5, Q5YJC1, Q62277, Q8BGN8, Q8TBG9
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 46 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| ER-Phagosome pathway | 5 | 20.9× | 8e-04 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
44 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 38 |
| Likely benign | 0 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
788 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 7:106091937:TAT:T | acceptor_gain | 1.0000 |
| 7:106091940:C:CC | acceptor_gain | 1.0000 |
| 7:106091942:A:C | acceptor_gain | 1.0000 |
| 7:106092948:CCA:C | donor_gain | 1.0000 |
| 7:106093103:C:CT | acceptor_gain | 1.0000 |
| 7:106093137:CCTAA:C | acceptor_loss | 1.0000 |
| 7:106093138:C:A | acceptor_loss | 1.0000 |
| 7:106093139:T:A | acceptor_loss | 1.0000 |
| 7:106097684:A:AC | donor_gain | 1.0000 |
| 7:106097685:C:CC | donor_gain | 1.0000 |
| 7:106097686:TTA:T | donor_loss | 1.0000 |
| 7:106097687:TA:T | donor_loss | 1.0000 |
| 7:106097688:A:AC | donor_gain | 1.0000 |
| 7:106097688:AC:A | donor_loss | 1.0000 |
| 7:106097688:ACTAT:A | donor_gain | 1.0000 |
| 7:106097689:C:CA | donor_gain | 1.0000 |
| 7:106097689:CT:C | donor_gain | 1.0000 |
| 7:106097689:CTA:C | donor_gain | 1.0000 |
| 7:106097689:CTAT:C | donor_gain | 1.0000 |
| 7:106097689:CTATC:C | donor_gain | 1.0000 |
| 7:106099153:CTCA:C | donor_loss | 1.0000 |
| 7:106099154:TCA:T | donor_loss | 1.0000 |
| 7:106099155:CA:C | donor_loss | 1.0000 |
| 7:106099157:C:CG | donor_loss | 1.0000 |
| 7:106099278:GCAAT:G | acceptor_gain | 1.0000 |
| 7:106099279:CAAT:C | acceptor_gain | 1.0000 |
| 7:106099279:CAATC:C | acceptor_gain | 1.0000 |
| 7:106099280:AAT:A | acceptor_gain | 1.0000 |
| 7:106099281:AT:A | acceptor_gain | 1.0000 |
| 7:106099282:TCTAC:T | acceptor_loss | 1.0000 |
AlphaMissense
1577 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 7:106091892:A:C | F231L | 0.998 |
| 7:106091892:A:T | F231L | 0.998 |
| 7:106091894:A:G | F231L | 0.998 |
| 7:106093083:A:G | W171R | 0.998 |
| 7:106093083:A:T | W171R | 0.998 |
| 7:106093093:G:C | S167R | 0.998 |
| 7:106093093:G:T | S167R | 0.998 |
| 7:106093095:T:G | S167R | 0.998 |
| 7:106093104:A:G | W164R | 0.998 |
| 7:106093104:A:T | W164R | 0.998 |
| 7:106091883:C:A | K234N | 0.997 |
| 7:106091883:C:G | K234N | 0.997 |
| 7:106091912:A:G | W225R | 0.997 |
| 7:106091912:A:T | W225R | 0.997 |
| 7:106091932:C:T | G218D | 0.997 |
| 7:106091933:C:G | G218R | 0.997 |
| 7:106099160:G:C | F82L | 0.997 |
| 7:106099160:G:T | F82L | 0.997 |
| 7:106099162:A:G | F82L | 0.997 |
| 7:106099262:A:C | F48L | 0.997 |
| 7:106099262:A:T | F48L | 0.997 |
| 7:106099264:A:G | F48L | 0.997 |
| 7:106091897:A:G | W230R | 0.996 |
| 7:106091897:A:T | W230R | 0.996 |
| 7:106093081:C:A | W171C | 0.996 |
| 7:106093081:C:G | W171C | 0.996 |
| 7:106099244:A:C | F54L | 0.996 |
| 7:106099244:A:T | F54L | 0.996 |
| 7:106099246:A:G | F54L | 0.996 |
| 7:106112152:C:A | K37N | 0.996 |
dbSNP variants (sampled 300 via entrez): RS1000016267 (7:106094508 C>T), RS1000316860 (7:106096923 TA>T,TAA), RS1000618625 (7:106095645 C>A,T), RS1000691068 (7:106096079 A>T), RS1000844049 (7:106109129 C>G), RS1000989652 (7:106102784 T>A), RS1001112980 (7:106102039 G>A), RS1001172942 (7:106108272 T>G), RS1001233880 (7:106103097 T>C), RS1001288856 (7:106107957 G>A), RS1001457546 (7:106091467 G>A), RS1001472324 (7:106114022 C>G,T), RS1001724829 (7:106098561 T>C,G), RS1001781831 (7:106104999 G>A), RS1001800013 (7:106114252 G>T)
Disease associations
OMIM: gene MIM:616665 | disease phenotypes:
GenCC curated gene-disease
Mondo (1): intellectual disability (MONDO:0001071)
Orphanet (1): NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D008607 | Intellectual Disability | C10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL6067066 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
4 potent at pChembl≥5 of 4 total, top 4 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.29 | Kd | 51.77 | nM | CHEMBL5653589 |
| 7.27 | ED50 | 53.55 | nM | CHEMBL5653589 |
| 5.21 | Kd | 6213 | nM | CHEMBL3752910 |
| 5.19 | ED50 | 6427 | nM | CHEMBL3752910 |
PubChem BioAssay actives
2 with measured affinity, of 4 total; 2 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149535: Binding affinity to human SYPL1 incubated for 45 mins by Kinobead based pull down assay | kd | 0.0518 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149535: Binding affinity to human SYPL1 incubated for 45 mins by Kinobead based pull down assay | kd | 6.2129 | uM |
CTD chemical–gene interactions
37 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | affects cotreatment, increases expression, decreases expression, increases abundance | 3 |
| Arsenic | increases abundance, increases expression, affects methylation, affects cotreatment | 2 |
| Valproic Acid | affects expression, decreases expression, decreases methylation | 2 |
| Cadmium Chloride | decreases expression, increases abundance, increases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| dicrotophos | decreases expression | 1 |
| pyrogallol 1,3-dimethyl ether | affects localization, affects cotreatment, increases expression | 1 |
| zinc chromate | increases abundance, increases expression | 1 |
| manganese chloride | affects cotreatment, increases abundance, increases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| chromium hexavalent ion | increases abundance, increases expression | 1 |
| deguelin | increases expression | 1 |
| nutlin 3 | affects cotreatment, increases secretion | 1 |
| abrine | increases expression | 1 |
| pyrachlostrobin | increases expression | 1 |
| picoxystrobin | increases expression | 1 |
| Air Pollutants | increases abundance, decreases expression | 1 |
| Benzo(a)pyrene | affects methylation | 1 |
| Cadmium | increases abundance, increases expression | 1 |
| Dactinomycin | affects cotreatment, increases secretion | 1 |
| Furaldehyde | affects cotreatment, increases expression, affects localization, decreases expression | 1 |
| Gallic Acid | decreases expression | 1 |
| Ivermectin | decreases expression | 1 |
| Lead | affects expression | 1 |
| Manganese | affects cotreatment, increases abundance, increases expression | 1 |
| Methyl Methanesulfonate | decreases expression | 1 |
| Rotenone | increases expression | 1 |
| Sodium Chloride | affects cotreatment, affects localization, decreases expression, increases expression | 1 |
| Testosterone | decreases expression | 1 |
| Thiram | decreases expression | 1 |
ChEMBL screening assays
1 unique, capped per target: 1 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5652577 | Binding | Binding affinity to human SYPL1 incubated for 45 mins by Kinobead based pull down assay | NVP-BHG712: Effects of Regioisomers on the Affinity and Selectivity toward the EPHrin Family. — ChemMedChem |
Clinical trials (associated diseases)
197 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT05657860 | PHASE4 | COMPLETED | Guanfacine Extended Release for the Reduction of Aggression and Self-injurious Behavior Associated With Prader-Willi Syndrome |
| NCT05744479 | PHASE4 | RECRUITING | Metformin for Antipsychotic-induced Weight Gain in Adults With Intellectual Disability |
| NCT06107829 | PHASE4 | WITHDRAWN | Valbenazine Treatment of Tardive Dyskinesia in Adults With Intellectual/Developmental Disabilities |
| NCT06997198 | PHASE4 | NOT_YET_RECRUITING | Deutetrabenazine Treatment for Tardive Dyskinesia in Intellectual/Developmental Disabilities |
| NCT02270736 | PHASE3 | COMPLETED | Clinical Study to Investigate the Efficacy and Safety of NT 201 Compared to Placebo in the Treatment of Chronic Troublesome Drooling Associated With Neurological Disorders and/or Intellectual Disability |
| NCT02304302 | PHASE2 | COMPLETED | Down Syndrome Memantine Follow-up Study |
| NCT03862950 | PHASE2 | COMPLETED | A Trial of Metformin in Individuals With Fragile X Syndrome (Met) |
| NCT04529226 | PHASE2 | UNKNOWN | Study to Compare Clozapine vs Treatment as Usual in People With Intellectual Disability & Treatment-resistant Psychosis |
| NCT04821856 | PHASE2 | COMPLETED | Evaluation of the Effectiveness of Cannabidiol in Treating Severe Behavioural Problems in Children and Adolescents With Intellectual Disability |
| NCT05273320 | PHASE1 | COMPLETED | Clinical Trial of Nabilone for Aggression in Adults With Intellectual and Developmental Disabilities |
| NCT05301361 | PHASE1 | ENROLLING_BY_INVITATION | Sensitivity of the NIH Toolbox to Stimulant Treatment in Intellectual Disabilities |
| NCT06016764 | PHASE1 | COMPLETED | Use of MRI and cTBS for Catatonia in Autism |
| NCT06586827 | PHASE1 | COMPLETED | Impact of Competency-Based Training and Technical Assistance Employment Outcomes of Individuals With ID/DD |
| NCT07531940 | PHASE1 | NOT_YET_RECRUITING | Escalating Doses of Memantine in Down Syndrome (MEDS-123) |
| NCT03479476 | PHASE2/PHASE3 | COMPLETED | A Trial of Metformin in Individuals With Fragile X Syndrome |
| NCT02616796 | PHASE1/PHASE2 | COMPLETED | Effects of Social Gaze Training on Brain and Behavior in Fragile X Syndrome |
| NCT06860672 | EARLY_PHASE1 | RECRUITING | Clinical Trial of the Dual Vector Base Editor for the Treatment of the CHD3-R1025W Mutation |
| NCT00597948 | Not specified | COMPLETED | Healthy Lifestyles for People With Intellectual Disabilities |
| NCT01087320 | Not specified | RECRUITING | Genome Medical Sequencing for Gene Discovery |
| NCT01652963 | Not specified | UNKNOWN | Picture-based Computerised Assessment and Training of Cognitive Behaviour Therapy Skills |
| NCT01695395 | Not specified | COMPLETED | Mental Health Care Provision for Adults With Intellectual Disability and a Mental Disorder |
| NCT01867554 | Not specified | COMPLETED | Research and Characterization of New Genes Involved in Intellectual Disability |
| NCT01915381 | Not specified | COMPLETED | Improving Adherence Healthy Lifestyle With a Smartphone Application Based on Adults With Intellectual Disabilities |
| NCT01988623 | Not specified | COMPLETED | Pivotal Response Treatment for Individuals With Intellectual Disabilities |
| NCT02099773 | Not specified | COMPLETED | Support Staff-client Interactions With Augmentative and Alternative Communication |
| NCT02136849 | Not specified | COMPLETED | Inter-regional Project of the Great Western Exploration Approach for Exome Molecular Causes Severe Intellectual Disability Isolated or Syndromic |
| NCT02225041 | Not specified | COMPLETED | Sedation Strategy and Cognitive Outcome After Critical Illness in Early Childhood |
| NCT02414438 | Not specified | COMPLETED | Establishing the Clinical Utility of First StepDx PLUS and NextStepDx PLUS Study |
| NCT02451761 | Not specified | COMPLETED | Apparently Balanced Chromosomal Translocation/ Next-generation Sequencing/ Intellectual Disability |
| NCT02461420 | Not specified | ACTIVE_NOT_RECRUITING | Mapping the Genotype, Phenotype, and Natural History of Phelan-McDermid Syndrome |
| NCT02461459 | Not specified | ACTIVE_NOT_RECRUITING | Autism Spectrum Disorder (ASD) and Intellectual Disability (ID) Determinants in Tuberous Sclerosis Complex (TSC) |
| NCT02486081 | Not specified | COMPLETED | Development and Application-Smart Football for Movement Evaluation and Training in the Special Education Population |
| NCT02504502 | Not specified | COMPLETED | Enhancing Genomic Laboratory Reports to Enhance Communication and Empower Patients |
| NCT02513277 | Not specified | COMPLETED | Diabetes Screening & Prevention for People With Learning (Intellectual) Disabilities:STOP Diabetes Study |
| NCT02561754 | Not specified | COMPLETED | Weight Management for Adolescents With IDD |
| NCT02591446 | Not specified | COMPLETED | Transcranial Magnetic Stimulation Studies in Autism Spectrum Disorders |
| NCT02714868 | Not specified | COMPLETED | Evaluation of Project TEAM (Teens Making Environmental and Activity Modifications) |
| NCT02721394 | Not specified | UNKNOWN | FCT With Young Children With ID in the UK: A Feasibility Project V.1 |
| NCT02746614 | Not specified | COMPLETED | Psychomotor Therapy Effects in Adaptive Behavior and Motor Proficiency in Intellectual Disability |
| NCT02836405 | Not specified | COMPLETED | TMS for the Investigation of Brain Plasticity in Autism Spectrum Disorders |
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.