SYT15-AS1

Summary

SYT15-AS1 (SYT15 antisense RNA 1, HGNC:56167) is a long non-coding RNA gene on chromosome 10q11.22.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56167
Approved symbol	SYT15-AS1
Name	SYT15 antisense RNA 1
Location	10q11.22
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231187
Ensembl biotype	lncRNA
Entrez	101927699
RNAcentral	URS0000D78064 — lncRNA, 1298 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000430188, ENST00000506914, ENST00000659936, ENST00000802578

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000430188 — 2 exons

Exon	Start	End
ENSE00001686636	46596009	46596330
ENSE00001699847	46597834	46598064

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 85.71.

Top tissues by expression

132 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
prefrontal cortex	UBERON:0000451	85.71	gold quality
superior frontal gyrus	UBERON:0002661	85.53	gold quality
frontal cortex	UBERON:0001870	84.63	gold quality
anterior cingulate cortex	UBERON:0009835	84.29	gold quality
right frontal lobe	UBERON:0002810	82.99	gold quality
cerebral cortex	UBERON:0000956	82.96	gold quality
temporal lobe	UBERON:0001871	81.69	gold quality
amygdala	UBERON:0001876	81.63	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	81.59	gold quality
Ammon’s horn	UBERON:0001954	81.22	gold quality
primary visual cortex	UBERON:0002436	80.30	gold quality
sural nerve	UBERON:0015488	79.04	gold quality
Brodmann (1909) area 9	UBERON:0013540	78.59	gold quality
nucleus accumbens	UBERON:0001882	78.55	gold quality
brain	UBERON:0000955	77.08	gold quality
cortical plate	UBERON:0005343	76.36	gold quality
hypothalamus	UBERON:0001898	76.27	gold quality
stromal cell of endometrium	CL:0002255	76.13	gold quality
substantia nigra	UBERON:0002038	75.78	gold quality
caudate nucleus	UBERON:0001873	75.23	gold quality
putamen	UBERON:0001874	74.92	gold quality
right hemisphere of cerebellum	UBERON:0014890	74.46	gold quality
cerebellum	UBERON:0002037	74.00	gold quality
cerebellar cortex	UBERON:0002129	73.90	gold quality
cerebellar hemisphere	UBERON:0002245	73.78	gold quality
upper lobe of left lung	UBERON:0008952	72.39	gold quality
right lung	UBERON:0002167	71.68	gold quality
granulocyte	CL:0000094	71.51	gold quality
lung	UBERON:0002048	71.36	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	71.31	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.33

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.