SZT2-AS1

Summary

SZT2-AS1 (SZT2 antisense RNA 1, HGNC:41225) is a long non-coding RNA gene on chromosome 1p34.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41225
Approved symbol	SZT2-AS1
Name	SZT2 antisense RNA 1
Location	1p34.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229372
Ensembl biotype	lncRNA
Entrez	100873952
RNAcentral	URS000047ED7C — lncRNA, 699 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000396885

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000396885 — 2 exons

Exon	Start	End
ENSE00001600795	43447776	43447932
ENSE00001673790	43448103	43448644

Expression profiles

Bgee: expression breadth ubiquitous, 119 present calls, max score 65.91.

Top tissues by expression

119 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
cortical plate	UBERON:0005343	65.91	gold quality
ventricular zone	UBERON:0003053	65.85	gold quality
ganglionic eminence	UBERON:0004023	65.16	gold quality
mucosa of transverse colon	UBERON:0004991	64.46	gold quality
stromal cell of endometrium	CL:0002255	62.78	gold quality
sural nerve	UBERON:0015488	59.55	silver quality
duodenum	UBERON:0002114	59.34	gold quality
blood	UBERON:0000178	58.58	gold quality
skeletal muscle tissue	UBERON:0001134	57.65	gold quality
right lobe of liver	UBERON:0001114	57.32	gold quality
liver	UBERON:0002107	57.23	gold quality
right uterine tube	UBERON:0001302	57.04	gold quality
prostate gland	UBERON:0002367	56.90	gold quality
urinary bladder	UBERON:0001255	56.70	gold quality
right lobe of thyroid gland	UBERON:0001119	56.29	gold quality
left ovary	UBERON:0002119	56.27	gold quality
muscle tissue	UBERON:0002385	56.00	gold quality
ovary	UBERON:0000992	55.75	gold quality
right ovary	UBERON:0002118	55.71	gold quality
pituitary gland	UBERON:0000007	55.59	gold quality
transverse colon	UBERON:0001157	55.04	gold quality
body of uterus	UBERON:0009853	54.86	gold quality
ectocervix	UBERON:0012249	54.57	gold quality
adult mammalian kidney	UBERON:0000082	54.33	gold quality
thyroid gland	UBERON:0002046	54.32	gold quality
colon	UBERON:0001155	54.23	gold quality
myometrium	UBERON:0001296	54.23	gold quality
placenta	UBERON:0001987	54.18	gold quality
endocervix	UBERON:0000458	54.01	gold quality
kidney	UBERON:0002113	53.87	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.86

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.